RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 CDH10Q9Y6N8 788 aa3.99□□□□□ -1.77
RTF1-204ENST00000558117 LOC100131303A0A0U1RQF7 123 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 A0A1B0GW15 77 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 FAM231BA6NCW3 169 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 CENPXA8MT69 81 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 ATP6V1G2O95670 118 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 PTHP01270 115 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 AQP1P29972 269 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 TFPI2P48307 235 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 TCTAP57738 103 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 PPP1CBP62140 327 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 ADARB1P78563 741 aaKnown RBP3.98□□□□□ -1.77
RTF1-204ENST00000558117 NDPQ00604 133 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 TNFRSF9Q07011 255 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 FLOT2Q14254 428 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 CNPY1Q3B7I2 92 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 ABCA11PQ4W5N1 156 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 CLEC12AQ5QGZ9 265 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 LELP1Q5T871 98 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 GLYATQ6IB77 296 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 TNFAIP8L2Q6P589 184 aaPredicted RBP3.98□□□□□ -1.77
RTF1-204ENST00000558117 TMPRSS11AQ6ZMR5 421 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 C6orf120Q7Z4R8 191 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 DHFR2Q86XF0 187 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 OR8J2Q8NGG1 315 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 ZNF563Q8TA94 476 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 GTSF1Q8WW33 167 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 OR5P2Q8WZ92 322 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 MS4A4EQ96PG1 132 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 MCHR1Q99705 422 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 SH3GL3Q99963 347 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 TMED9Q9BVK6 235 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 TMEM59Q9BXS4 323 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 TPT1P8Q9HAU6 139 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 ABCB10Q9NRK6 738 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 IL20Q9NYY1 176 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 BTNL2Q9UIR0 455 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 RPL36Q9Y3U8 105 aaKnown RBP3.98□□□□□ -1.77
RTF1-204ENST00000558117 KCNE3Q9Y6H6 103 aa3.98□□□□□ -1.77
RTF1-204ENST00000558117 EVPLLA8MZ36 301 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 M0R1W7 72 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 CXCR6O00574 342 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 ITGB1BP1O14713 200 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 NDUFA2O43678 99 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 TPST1O60507 370 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 ZNF682O95780 498 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 SNRPCP09234 159 aaKnown RBP3.97□□□□□ -1.77
RTF1-204ENST00000558117 HTR2CP28335 458 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 APLNRP35414 380 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 GGT2P36268 569 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 HAAOP46952 286 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 SRP9P49458 86 aaKnown RBP3.97□□□□□ -1.77
RTF1-204ENST00000558117 GZMMP51124 257 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 DYNLT3P51808 116 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 LYZP61626 148 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 MRPS15P82914 257 aaKnown RBP3.97□□□□□ -1.77
RTF1-204ENST00000558117 RGNQ15493 299 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 KCNJ8Q15842 424 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 TNXAQ16473 311 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 COQ5Q5HYK3 327 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 LDLRAD2Q5SZI1 272 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 SLC22A24Q8N4F4 322 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 OR10AD1Q8NGE0 317 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 OR8J3Q8NGG0 315 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 OR5D16Q8NGK9 328 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 CDS1Q92903 461 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 DUS3LQ96G46 650 aaKnown RBP3.97□□□□□ -1.77
RTF1-204ENST00000558117 RNF170Q96K19 258 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 C9orf85Q96MD7 179 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 SH3GL1Q99961 368 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 TM2D1Q9BX74 207 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 OR2S2Q9NQN1 319 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 TAS2R7Q9NYW3 318 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 KAAG1Q9UBP8 84 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 CLEC2DQ9UHP7 191 aa3.97□□□□□ -1.77
RTF1-204ENST00000558117 RCL1Q9Y2P8 373 aaKnown RBP3.97□□□□□ -1.77
RTF1-204ENST00000558117 A0A0G2JLM5 398 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 A0A1B0GWB2 263 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 TOR1AO14656 332 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 PPP1R2P9O14990 202 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 SNAI2O43623 268 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 SOX15O60248 233 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 KRT75O95678 551 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 FADS2O95864 444 aaKnown RBP3.96□□□□□ -1.78
RTF1-204ENST00000558117 SERPINA1P01009 418 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 GYPAP02724 150 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 HMGN2P05204 90 aaKnown RBP3.96□□□□□ -1.78
RTF1-204ENST00000558117 MMP7P09237 267 aaPredicted RBP3.96□□□□□ -1.78
RTF1-204ENST00000558117 PGA5P0DJD9 388 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 CD40LGP29965 261 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 POLR2HP52434 150 aaKnown RBP3.96□□□□□ -1.78
RTF1-204ENST00000558117 PUDPQ08623 228 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 SNCBQ16143 134 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 LRRC36Q1X8D7 754 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 MEDAGQ5VYS4 303 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 LPCAT4Q643R3 524 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 ARPINQ7Z6K5 226 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 OR11H1Q8NG94 326 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 OR56B4Q8NH76 319 aa3.96□□□□□ -1.78
RTF1-204ENST00000558117 CANT1Q8WVQ1 401 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms