RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 SPAG16Q8N0X2 631 aa12.18□□□□□ -0.46
NEDD1-213ENST00000557644 FLYWCH2Q96CP2 140 aaKnown RBP12.18□□□□□ -0.46
NEDD1-213ENST00000557644 C14orf166Q9Y224 244 aaKnown RBP12.18□□□□□ -0.46
NEDD1-213ENST00000557644 SRRM4A7MD48 611 aaKnown RBP12.18□□□□□ -0.46
NEDD1-213ENST00000557644 MPPED1O15442 326 aa12.18□□□□□ -0.46
NEDD1-213ENST00000557644 AMY1AP04745 511 aa12.18□□□□□ -0.46
NEDD1-213ENST00000557644 CATR1Q13166 79 aa12.18□□□□□ -0.46
NEDD1-213ENST00000557644 ASAH1Q13510 395 aa12.18□□□□□ -0.46
NEDD1-213ENST00000557644 RBMS2Q15434 407 aaKnown RBP12.18□□□□□ -0.46
NEDD1-213ENST00000557644 OR4C13Q8NGP0 309 aa12.18□□□□□ -0.46
NEDD1-213ENST00000557644 COPZ2Q9P299 210 aa12.18□□□□□ -0.46
NEDD1-213ENST00000557644 FLVCR2Q9UPI3 526 aa12.18□□□□□ -0.46
NEDD1-213ENST00000557644 TRIM77I1YAP6 450 aa12.17□□□□□ -0.46
NEDD1-213ENST00000557644 VSIG10L2P0DP72 767 aa12.17□□□□□ -0.46
NEDD1-213ENST00000557644 F2RP25116 425 aa12.17□□□□□ -0.46
NEDD1-213ENST00000557644 RND3P61587 244 aa12.17□□□□□ -0.46
NEDD1-213ENST00000557644 RPS16P62249 146 aaKnown RBP12.17□□□□□ -0.46
NEDD1-213ENST00000557644 BLCAPP62952 87 aa12.17□□□□□ -0.46
NEDD1-213ENST00000557644 TMED4Q7Z7H5 227 aa12.17□□□□□ -0.46
NEDD1-213ENST00000557644 TMEM230Q96A57 120 aa12.17□□□□□ -0.46
NEDD1-213ENST00000557644 SLC25A21Q9BQT8 299 aaPredicted RBP12.17□□□□□ -0.46
NEDD1-213ENST00000557644 NDUFB6O95139 128 aa12.16□□□□□ -0.46
NEDD1-213ENST00000557644 S100GP29377 79 aa12.16□□□□□ -0.46
NEDD1-213ENST00000557644 SLC6A1P30531 599 aa12.16□□□□□ -0.46
NEDD1-213ENST00000557644 RELBQ01201 579 aa12.16□□□□□ -0.46
NEDD1-213ENST00000557644 TAGLNQ01995 201 aaKnown RBP12.16□□□□□ -0.46
NEDD1-213ENST00000557644 LIAT1Q6ZQX7 453 aa12.16□□□□□ -0.46
NEDD1-213ENST00000557644 Q6ZS46 218 aa12.16□□□□□ -0.46
NEDD1-213ENST00000557644 HARBI1Q96MB7 349 aa12.16□□□□□ -0.46
NEDD1-213ENST00000557644 MOB4Q9Y3A3 225 aa12.16□□□□□ -0.46
NEDD1-213ENST00000557644 SHOXO15266 292 aa12.16□□□□□ -0.46
NEDD1-213ENST00000557644 RRASP10301 218 aa12.16□□□□□ -0.46
NEDD1-213ENST00000557644 AKR1C4P17516 323 aa12.16□□□□□ -0.46
NEDD1-213ENST00000557644 SP6Q3SY56 376 aa12.16□□□□□ -0.46
NEDD1-213ENST00000557644 ZNF585BQ52M93 769 aa12.16□□□□□ -0.46
NEDD1-213ENST00000557644 TMEM177Q53S58 311 aa12.16□□□□□ -0.46
NEDD1-213ENST00000557644 DHRS7BQ6IAN0 325 aaPredicted RBP12.16□□□□□ -0.46
NEDD1-213ENST00000557644 VKORC1L1Q8N0U8 176 aa12.16□□□□□ -0.46
NEDD1-213ENST00000557644 Q8N9W7 124 aa12.16□□□□□ -0.46
NEDD1-213ENST00000557644 OR4S2Q8NH73 311 aa12.16□□□□□ -0.46
NEDD1-213ENST00000557644 TP53RKQ96S44 253 aa12.16□□□□□ -0.46
NEDD1-213ENST00000557644 RNF212BA8MTL3 300 aa12.15□□□□□ -0.46
NEDD1-213ENST00000557644 IGLV2-23P01705 113 aa12.15□□□□□ -0.46
NEDD1-213ENST00000557644 CBX3Q13185 183 aa12.15□□□□□ -0.46
NEDD1-213ENST00000557644 FAM71E2Q8N5Q1 922 aa12.15□□□□□ -0.46
NEDD1-213ENST00000557644 C5orf56Q8N8D9 126 aa12.15□□□□□ -0.46
NEDD1-213ENST00000557644 POC5Q8NA72 575 aa12.15□□□□□ -0.46
NEDD1-213ENST00000557644 SCGB3A2Q96PL1 93 aa12.15□□□□□ -0.46
NEDD1-213ENST00000557644 NBR2O15453 112 aa12.15□□□□□ -0.46
NEDD1-213ENST00000557644 C11orf88Q6PI97 169 aa12.15□□□□□ -0.46
NEDD1-213ENST00000557644 C16orf82Q7Z2V1 217 aa12.15□□□□□ -0.46
NEDD1-213ENST00000557644 CCDC71LQ8N9Z2 235 aa12.15□□□□□ -0.46
NEDD1-213ENST00000557644 FBXL15Q9H469 300 aa12.15□□□□□ -0.46
NEDD1-213ENST00000557644 RAB18Q9NP72 206 aa12.15□□□□□ -0.46
NEDD1-213ENST00000557644 TPSG1Q9NRR2 321 aa12.15□□□□□ -0.46
NEDD1-213ENST00000557644 LIN7CQ9NUP9 197 aaKnown RBP12.15□□□□□ -0.46
NEDD1-213ENST00000557644 C1RLQ9NZP8 487 aa12.15□□□□□ -0.46
NEDD1-213ENST00000557644 TEX13DA0A0J9YY54 714 aaPredicted RBP12.14□□□□□ -0.47
NEDD1-213ENST00000557644 C3orf85A0A1B0GTC6 90 aa12.14□□□□□ -0.47
NEDD1-213ENST00000557644 CRYM-AS1A6NIL9 109 aa12.14□□□□□ -0.47
NEDD1-213ENST00000557644 SLC25A17O43808 307 aa12.14□□□□□ -0.47
NEDD1-213ENST00000557644 S1PR2O95136 353 aa12.14□□□□□ -0.47
NEDD1-213ENST00000557644 KIR2DS2P43631 304 aa12.14□□□□□ -0.47
NEDD1-213ENST00000557644 PSG5Q15238 335 aa12.14□□□□□ -0.47
NEDD1-213ENST00000557644 MZT2BQ6NZ67 158 aa12.14□□□□□ -0.47
NEDD1-213ENST00000557644 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.14□□□□□ -0.47
NEDD1-213ENST00000557644 NPBQ8NG41 125 aa12.14□□□□□ -0.47
NEDD1-213ENST00000557644 FAM240BA0A1B0GVZ2 78 aa12.14□□□□□ -0.47
NEDD1-213ENST00000557644 ARPC1BO15143 372 aaKnown RBP12.14□□□□□ -0.47
NEDD1-213ENST00000557644 TCRBP04435 133 aa12.14□□□□□ -0.47
NEDD1-213ENST00000557644 CRYBA1P05813 215 aa12.14□□□□□ -0.47
NEDD1-213ENST00000557644 RPA2P15927 270 aa12.14□□□□□ -0.47
NEDD1-213ENST00000557644 KRTAP24-1Q3LI83 254 aa12.14□□□□□ -0.47
NEDD1-213ENST00000557644 OSR1Q8TAX0 266 aaPredicted RBP12.14□□□□□ -0.47
NEDD1-213ENST00000557644 RNF5Q99942 180 aa12.14□□□□□ -0.47
NEDD1-213ENST00000557644 NAA60Q9H7X0 242 aa12.14□□□□□ -0.47
NEDD1-213ENST00000557644 PRR13Q9NZ81 148 aa12.14□□□□□ -0.47
NEDD1-213ENST00000557644 RRHO14718 337 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 RBFOX2O43251 390 aaKnown RBP eCLIP12.13□□□□□ -0.47
NEDD1-213ENST00000557644 NDUFA3O95167 84 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 OR5AC1P0C628 307 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 LPAR6P43657 344 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 SUPT4H1P63272 117 aaKnown RBP12.13□□□□□ -0.47
NEDD1-213ENST00000557644 Q6ZSV7 163 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 SSX9Q7RTT3 188 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 NRARPQ7Z6K4 114 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 CENPSQ8N2Z9 138 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 OR8H1Q8NGG4 311 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 TSNAXQ99598 290 aaKnown RBP12.13□□□□□ -0.47
NEDD1-213ENST00000557644 NPFFR1Q9GZQ6 430 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 C20orf85Q9H1P6 137 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 METTL1Q9UBP6 276 aaKnown RBP12.13□□□□□ -0.47
NEDD1-213ENST00000557644 TRAV6A0A075B6T7 132 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 H0Y980 276 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 FGF16O43320 207 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 ANXA7P20073 488 aaKnown RBP12.13□□□□□ -0.47
NEDD1-213ENST00000557644 LGALS7P47929 136 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 C5orf64Q2M2E5 130 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 CD300LFQ8TDQ1 290 aa12.13□□□□□ -0.47
NEDD1-213ENST00000557644 BEX1Q9HBH7 125 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms