RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 PSMB6P28072 239 aa11.72□□□□□ -0.53
ARHGEF40-208ENST00000557498 CEACAM3P40198 252 aa11.72□□□□□ -0.53
ARHGEF40-208ENST00000557498 UBE2E1P51965 193 aa11.72□□□□□ -0.53
ARHGEF40-208ENST00000557498 RAB32Q13637 225 aa11.72□□□□□ -0.53
ARHGEF40-208ENST00000557498 LDLRAD2Q5SZI1 272 aa11.72□□□□□ -0.53
ARHGEF40-208ENST00000557498 MINOS1Q5TGZ0 78 aa11.72□□□□□ -0.53
ARHGEF40-208ENST00000557498 PDPNQ86YL7 162 aa11.72□□□□□ -0.53
ARHGEF40-208ENST00000557498 PDZD9Q8IXQ8 264 aa11.72□□□□□ -0.53
ARHGEF40-208ENST00000557498 OR11H4Q8NGC9 324 aa11.72□□□□□ -0.53
ARHGEF40-208ENST00000557498 LHX4Q969G2 390 aa11.72□□□□□ -0.53
ARHGEF40-208ENST00000557498 DPM3Q9P2X0 92 aa11.72□□□□□ -0.53
ARHGEF40-208ENST00000557498 WASHC3Q9Y3C0 194 aa11.72□□□□□ -0.53
ARHGEF40-208ENST00000557498 MINOS1-NBL1R4GNA1 71 aa11.72□□□□□ -0.53
ARHGEF40-208ENST00000557498 LRBAP50851 2863 aa11.72□□□□□ -0.53
ARHGEF40-208ENST00000557498 IGHV1-3A0A0C4DH29 117 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 A0A1W2PPI3 338 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 A0A1W2PRD5 423 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 A0A1W2PRF3 423 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 A0A1W2PRM7 423 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 MARCH11A6NNE9 402 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 MPC2O95563 127 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 SLC25A4P12235 298 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 NQO2P16083 231 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 GATA3P23771 443 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 RAB13P51153 203 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 ERVK-16P61578 105 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 SMCO1Q147U7 214 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 IZUMO4Q1ZYL8 232 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 C11orf87Q6NUJ2 197 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 H2BFWTQ7Z2G1 175 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 FOXC2Q99958 501 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 HIF1ANQ9NWT6 349 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 CACNG5Q9UF02 275 aa11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 TBL2Q9Y4P3 447 aaKnown RBP11.71□□□□□ -0.53
ARHGEF40-208ENST00000557498 ABCA2Q9BZC7 2435 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 FXYD6-FXYD2A0A087WZ82 144 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 OOSP1A8MZH6 123 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 H7C2Y5 167 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 PITX3O75364 302 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 SCGB1D2O95969 90 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 IGKV1-16P04430 117 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 PET100P0DJ07 73 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 IGHV4-31P0DP07 118 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 MC5RP33032 325 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 S100A10P60903 97 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 POU2AF1Q16633 256 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 MIDNQ504T8 468 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 Q6ZRM9 215 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 LHFPL4Q7Z7J7 247 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 MOB3BQ86TA1 216 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 OR8H3Q8N146 312 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 MAPK1IP1LQ8NDC0 245 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 DMBX1Q8NFW5 382 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 OR1S1Q8NH92 325 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 GRPEL2Q8TAA5 225 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 OSR1Q8TAX0 266 aaPredicted RBP11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 THAP6Q8TBB0 222 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 ZFP57Q9NU63 452 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 COA4Q9NYJ1 87 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 MBD2Q9UBB5 411 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 AUP1Q9Y679 476 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 CR1P17927 2039 aa11.7□□□□□ -0.54
ARHGEF40-208ENST00000557498 FBN2P35556 2912 aa11.69□□□□□ -0.54
ARHGEF40-208ENST00000557498 FAM90A9PA6NNJ1 464 aa11.69□□□□□ -0.54
ARHGEF40-208ENST00000557498 H0YIZ8 118 aa11.69□□□□□ -0.54
ARHGEF40-208ENST00000557498 K7EPK0 472 aa11.69□□□□□ -0.54
ARHGEF40-208ENST00000557498 HRASP01112 189 aa11.69□□□□□ -0.54
ARHGEF40-208ENST00000557498 MBPP02686 304 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF40-208ENST00000557498 LYL1P12980 280 aa11.69□□□□□ -0.54
ARHGEF40-208ENST00000557498 NKX2-1P43699 371 aaPredicted RBP11.69□□□□□ -0.54
ARHGEF40-208ENST00000557498 ARHGDIBP52566 201 aa11.69□□□□□ -0.54
ARHGEF40-208ENST00000557498 LGALS4P56470 323 aa11.69□□□□□ -0.54
ARHGEF40-208ENST00000557498 TMEM249Q2WGJ8 235 aa11.69□□□□□ -0.54
ARHGEF40-208ENST00000557498 TMEM177Q53S58 311 aa11.69□□□□□ -0.54
ARHGEF40-208ENST00000557498 PRSS54Q6PEW0 395 aa11.69□□□□□ -0.54
ARHGEF40-208ENST00000557498 FAM71E2Q8N5Q1 922 aa11.69□□□□□ -0.54
ARHGEF40-208ENST00000557498 HARBI1Q96MB7 349 aa11.69□□□□□ -0.54
ARHGEF40-208ENST00000557498 TMEM140Q9NV12 185 aa11.69□□□□□ -0.54
ARHGEF40-208ENST00000557498 LSM5Q9Y4Y9 91 aaKnown RBP11.69□□□□□ -0.54
ARHGEF40-208ENST00000557498 POMT1Q9Y6A1 747 aa11.69□□□□□ -0.54
ARHGEF40-208ENST00000557498 IGHV3-72A0A0B4J1Y9 119 aa11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 CENPVL3A0A0U1RRI6 287 aa11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 HMSDA8MTL9 139 aa11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 NPFFO15130 113 aa11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 SHOXO15266 292 aa11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 ST8SIA3O43173 380 aa11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 DEDDO75618 318 aa11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 OR9G9P0C7N8 305 aa11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 CCDC144NLQ6NUI1 221 aa11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 TMEM65Q6PI78 240 aa11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 SSX9Q7RTT3 188 aa11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 FOXRED2Q8IWF2 684 aa11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 VKORC1L1Q8N0U8 176 aa11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 C9orf62Q8N4C0 152 aa11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 WFDC11Q8NEX6 87 aa11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 OR4C13Q8NGP0 309 aa11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 FLYWCH2Q96CP2 140 aaKnown RBP11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 RBMXL1Q96E39 390 aaKnown RBP11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 AIFM2Q9BRQ8 373 aa11.68□□□□□ -0.54
ARHGEF40-208ENST00000557498 RNF126Q9BV68 326 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms