RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 HOGA1Q86XE5 327 aa10.87□□□□□ -0.67
VPS33B-206ENST00000557358 SNX29P2Q8IUI4 249 aa10.87□□□□□ -0.67
VPS33B-206ENST00000557358 ZNF383Q8NA42 475 aa10.87□□□□□ -0.67
VPS33B-206ENST00000557358 DPF1Q92782 380 aa10.87□□□□□ -0.67
VPS33B-206ENST00000557358 BORCS5Q969J3 196 aa10.87□□□□□ -0.67
VPS33B-206ENST00000557358 HARBI1Q96MB7 349 aa10.87□□□□□ -0.67
VPS33B-206ENST00000557358 SOSTQ9BQB4 213 aa10.87□□□□□ -0.67
VPS33B-206ENST00000557358 WDR12Q9GZL7 423 aaKnown RBP10.87□□□□□ -0.67
VPS33B-206ENST00000557358 IGHV7-81A0A0B4J1V7 117 aa10.86□□□□□ -0.67
VPS33B-206ENST00000557358 J3QRK9 145 aa10.86□□□□□ -0.67
VPS33B-206ENST00000557358 ATP6V0E1O15342 81 aa10.86□□□□□ -0.67
VPS33B-206ENST00000557358 IGHG4P01861 327 aa10.86□□□□□ -0.67
VPS33B-206ENST00000557358 HLA-DQB1P01920 261 aa10.86□□□□□ -0.67
VPS33B-206ENST00000557358 NFYAP23511 347 aaPredicted RBP10.86□□□□□ -0.67
VPS33B-206ENST00000557358 MYCNOSP40205 109 aa10.86□□□□□ -0.67
VPS33B-206ENST00000557358 MRPS10P82664 201 aaKnown RBP10.86□□□□□ -0.67
VPS33B-206ENST00000557358 PSG5Q15238 335 aa10.86□□□□□ -0.67
VPS33B-206ENST00000557358 ZNF79Q15937 498 aa10.86□□□□□ -0.67
VPS33B-206ENST00000557358 ECSCRQ19T08 205 aa10.86□□□□□ -0.67
VPS33B-206ENST00000557358 RITA1Q96K30 269 aa10.86□□□□□ -0.67
VPS33B-206ENST00000557358 CLCC1Q96S66 551 aa10.86□□□□□ -0.67
VPS33B-206ENST00000557358 HSD17B10Q99714 261 aaKnown RBP10.86□□□□□ -0.67
VPS33B-206ENST00000557358 MCRIP2Q9BUT9 160 aaKnown RBP10.86□□□□□ -0.67
VPS33B-206ENST00000557358 WSB1Q9Y6I7 421 aa10.86□□□□□ -0.67
VPS33B-206ENST00000557358 IGKV1D-8A0A087WSZ0 117 aa10.85□□□□□ -0.67
VPS33B-206ENST00000557358 CTDSPLO15194 276 aa10.85□□□□□ -0.67
VPS33B-206ENST00000557358 SLC25A17O43808 307 aa10.85□□□□□ -0.67
VPS33B-206ENST00000557358 SSX5O60225 188 aa10.85□□□□□ -0.67
VPS33B-206ENST00000557358 TUSC2O75896 110 aa10.85□□□□□ -0.67
VPS33B-206ENST00000557358 ACTL6BO94805 426 aa10.85□□□□□ -0.67
VPS33B-206ENST00000557358 IGKV1-16P04430 117 aa10.85□□□□□ -0.67
VPS33B-206ENST00000557358 PRSS3P35030 304 aa10.85□□□□□ -0.67
VPS33B-206ENST00000557358 CDX1P47902 265 aaPredicted RBP10.85□□□□□ -0.67
VPS33B-206ENST00000557358 TAS2R46P59540 309 aa10.85□□□□□ -0.67
VPS33B-206ENST00000557358 HERV-K104P61576 105 aa10.85□□□□□ -0.67
VPS33B-206ENST00000557358 CX3CL1P78423 397 aa10.85□□□□□ -0.67
VPS33B-206ENST00000557358 PYDC2Q56P42 97 aa10.85□□□□□ -0.67
VPS33B-206ENST00000557358 ZNF562Q6V9R5 426 aa10.85□□□□□ -0.67
VPS33B-206ENST00000557358 BVESQ8NE79 360 aa10.85□□□□□ -0.67
VPS33B-206ENST00000557358 OSR1Q8TAX0 266 aaPredicted RBP10.85□□□□□ -0.67
VPS33B-206ENST00000557358 RCC1LQ96I51 464 aaKnown RBP10.85□□□□□ -0.67
VPS33B-206ENST00000557358 ABHD1Q96SE0 405 aa10.85□□□□□ -0.67
VPS33B-206ENST00000557358 SRRQ9GZT4 340 aa10.85□□□□□ -0.67
VPS33B-206ENST00000557358 VWFP04275 2813 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 PROP1O75360 226 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 CRYZL1O95825 349 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 RPLP1P05386 114 aaKnown RBP10.84□□□□□ -0.67
VPS33B-206ENST00000557358 PTHLHP12272 177 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 FCGR2CP31995 323 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 DUTP33316 252 aaKnown RBP10.84□□□□□ -0.67
VPS33B-206ENST00000557358 KIR2DS2P43631 304 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 CDK10Q15131 360 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 TMEM177Q53S58 311 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 RNASE12Q5GAN4 147 aaKnown RBP10.84□□□□□ -0.67
VPS33B-206ENST00000557358 UNQ5815/PRO19632Q6UWF5 114 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 C8orf86Q6ZUL3 223 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 KCTD9Q7L273 389 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 PPP1R27Q86WC6 154 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 C1QL4Q86Z23 238 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 GVQW1Q8N7I0 195 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 ZBTB34Q8NCN2 500 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 OR5AP2Q8NGF4 316 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 OR5M8Q8NGP6 311 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 SMIM4Q8WVI0 70 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 ARPC1AQ92747 370 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 AIFM2Q9BRQ8 373 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 SCPEP1Q9HB40 452 aa10.84□□□□□ -0.67
VPS33B-206ENST00000557358 ZMAT5Q9UDW3 170 aaKnown RBP10.84□□□□□ -0.67
VPS33B-206ENST00000557358 FOXA2Q9Y261 457 aaPredicted RBP10.84□□□□□ -0.67
VPS33B-206ENST00000557358 RBMX2Q9Y388 322 aaKnown RBP10.84□□□□□ -0.67
VPS33B-206ENST00000557358 A0A1W2PN81 502 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 GABARAPH6UMI1 98 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 SULT1C2O00338 296 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 FCGR3BO75015 233 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 CA2P00918 260 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 CHRNA7P36544 502 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 PPP5CP53041 499 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 RAB25P57735 213 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 GNB1P62873 340 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 CATR1Q13166 79 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 FXYD3Q14802 87 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 ACTBL2Q562R1 376 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 ZNF66Q6ZN08 573 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 REC114Q7Z4M0 266 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 RNF152Q8N8N0 203 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 GDPD1Q8N9F7 314 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 WFDC9Q8NEX5 89 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 OR5H2Q8NGV7 314 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 OR4S2Q8NH73 311 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 SECTM1Q8WVN6 248 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 TCTEX1D2Q8WW35 142 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 TMEM68Q96MH6 324 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 VSIG4Q9Y279 399 aa10.83□□□□□ -0.68
VPS33B-206ENST00000557358 G3V318 75 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 G3V4G9 280 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 CCL24O00175 119 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 GSTZ1O43708 216 aaPredicted RBP10.82□□□□□ -0.68
VPS33B-206ENST00000557358 PPYP01298 95 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 PSMB8P28062 276 aa10.82□□□□□ -0.68
VPS33B-206ENST00000557358 S100GP29377 79 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms