RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 OR8B12Q8NGG6 310 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 OR51A4Q8NGJ6 313 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 OR5L1Q8NGL2 311 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 OR5D14Q8NGL3 314 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 TMEM203Q969S6 136 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 APOBEC3DQ96AK3 386 aaPredicted RBP2.22□□□□□ -2.05
VRK1-207ENST00000557352 MRPS24Q96EL2 167 aaKnown RBP2.22□□□□□ -2.05
VRK1-207ENST00000557352 TXN2Q99757 166 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 CHIAQ9BZP6 476 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 CHST5Q9GZS9 411 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 SRRQ9GZT4 340 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 C6orf62Q9GZU0 229 aaPredicted RBP2.22□□□□□ -2.05
VRK1-207ENST00000557352 PBOV1Q9GZY1 135 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 DEFB127Q9H1M4 99 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 MIXL1Q9H2W2 232 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 PRORYQ9H606 182 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 RERGLQ9H628 205 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 RNF167Q9H6Y7 350 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 PLEKHA1Q9HB21 404 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 NEK6Q9HC98 313 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 TMEM138Q9NPI0 162 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 IL36GQ9NZH8 169 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 GNG12Q9UBI6 72 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 ZNF629Q9UEG4 869 aaPredicted RBP2.22□□□□□ -2.05
VRK1-207ENST00000557352 TP53TG5Q9Y2B4 290 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 NOP16Q9Y3C1 178 aaKnown RBP2.22□□□□□ -2.05
VRK1-207ENST00000557352 RHBDD3Q9Y3P4 386 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 FAM215AQ9Y5M1 114 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 V9GYH0 126 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 TNCP24821 2201 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 HRNRQ86YZ3 2850 aaPredicted RBP2.22□□□□□ -2.05
VRK1-207ENST00000557352 LRRK2Q5S007 2527 aa2.22□□□□□ -2.05
VRK1-207ENST00000557352 TRAV8-7A0A075B6U6 113 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 IGHV2-70DA0A0C4DH43 119 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 ZNF816-ZNF321PA0A0X1KG74 233 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 A0A1B0GWB2 263 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 A6NDX4 124 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 FABP12A6NFH5 140 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 OR5H1A6NKK0 313 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 OR5B21A6NL26 309 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 PPIAL4DF5H284 164 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 GABARAPH6UMI1 98 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 SULT1C2O00338 296 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 RGS5O15539 181 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 AKR7A2O43488 359 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 ANKRD17O75179 2603 aaKnown RBP2.21□□□□□ -2.06
VRK1-207ENST00000557352 ZNF780AO75290 641 aaPredicted RBP2.21□□□□□ -2.06
VRK1-207ENST00000557352 RPP14O95059 124 aaKnown RBP2.21□□□□□ -2.06
VRK1-207ENST00000557352 SNAPINO95295 136 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 CST4P01036 141 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 CBR1P16152 277 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 RCC1P18754 421 aaPredicted RBP2.21□□□□□ -2.06
VRK1-207ENST00000557352 RAB3AP20336 220 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 PRKACBP22694 351 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 STOMP27105 288 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 HTR2CP28335 458 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 PEX19P40855 299 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 OR10A3P58181 314 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 DEFA1P59665 94 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 DEFA3P59666 94 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 QRFPP83859 136 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 PITPNAQ00169 270 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 EWSR1Q01844 656 aaKnown RBP eCLIP2.21□□□□□ -2.06
VRK1-207ENST00000557352 PJVKQ0ZLH3 352 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 ARFRP1Q13795 201 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 GPR176Q14439 515 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 INSL4Q14641 139 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 OXA1LQ15070 435 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 RAB11BQ15907 218 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 GABRA6Q16445 453 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 SGCAQ16586 387 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 TBC1D28Q2M2D7 210 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 RGS21Q2M5E4 152 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 PABPC1L2AQ5JQF8 200 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 TIMM23BQ5SRD1 257 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 CLVS2Q5SYC1 327 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 FAM27D1Q5T7N8 215 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 CNIH2Q6PI25 160 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 ASCL4Q6XD76 172 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 LINC00596Q86U02 117 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 SAXO1Q8IYX7 474 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 OR5AS1Q8N127 324 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 LINC01561Q8N1V8 128 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 ZNF283Q8N7M2 679 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 Q8N9W7 124 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 PXT1Q8NFP0 134 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 STEAP2Q8NFT2 490 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 STXBP6Q8NFX7 210 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 OR1M1Q8NGA1 313 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 OR10AC1Q8NH08 325 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 TRMT10AQ8TBZ6 339 aaKnown RBP2.21□□□□□ -2.06
VRK1-207ENST00000557352 OR51E1Q8TCB6 317 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 SMIM4Q8WVI0 70 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 TSEN15Q8WW01 171 aaKnown RBP2.21□□□□□ -2.06
VRK1-207ENST00000557352 PPP1R14BQ96C90 147 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 DIRAS2Q96HU8 199 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 CEP19Q96LK0 163 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 C7orf50Q9BRJ6 194 aaKnown RBP2.21□□□□□ -2.06
VRK1-207ENST00000557352 TTTY10Q9BZA0 68 aa2.21□□□□□ -2.06
VRK1-207ENST00000557352 SLC22A4Q9H015 551 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms