RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 STPG2Q8N412 459 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 ZBTB34Q8NCN2 500 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 CHPT1Q8WUD6 406 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 SMIM4Q8WVI0 70 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 TCTEX1D2Q8WW35 142 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 BORCS5Q969J3 196 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 METTL1Q9UBP6 276 aaKnown RBP10.73□□□□□ -0.69
SHMT2-228ENST00000557302 LINC00527Q9UJ94 153 aa10.73□□□□□ -0.69
SHMT2-228ENST00000557302 PSMB11A5LHX3 300 aa10.72□□□□□ -0.69
SHMT2-228ENST00000557302 M0QYG6 137 aa10.72□□□□□ -0.69
SHMT2-228ENST00000557302 SHOXO15266 292 aa10.72□□□□□ -0.69
SHMT2-228ENST00000557302 TNFSF12O43508 249 aa10.72□□□□□ -0.69
SHMT2-228ENST00000557302 SLC25A17O43808 307 aa10.72□□□□□ -0.69
SHMT2-228ENST00000557302 CD3DP04234 171 aa10.72□□□□□ -0.69
SHMT2-228ENST00000557302 IFNA6P05013 189 aa10.72□□□□□ -0.69
SHMT2-228ENST00000557302 TBPP20226 339 aa10.72□□□□□ -0.69
SHMT2-228ENST00000557302 TAS2R19P59542 299 aa10.72□□□□□ -0.69
SHMT2-228ENST00000557302 RPL30P62888 115 aaKnown RBP10.72□□□□□ -0.69
SHMT2-228ENST00000557302 SLC35B1P78383 322 aa10.72□□□□□ -0.69
SHMT2-228ENST00000557302 EIF4EBP1Q13541 118 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-228ENST00000557302 RNASE10Q5GAN6 216 aaKnown RBP10.72□□□□□ -0.69
SHMT2-228ENST00000557302 OR2B11Q5JQS5 317 aa10.72□□□□□ -0.69
SHMT2-228ENST00000557302 ZNF818PQ6ZRF7 136 aa10.72□□□□□ -0.69
SHMT2-228ENST00000557302 MFSD4AQ8N468 514 aa10.72□□□□□ -0.69
SHMT2-228ENST00000557302 TMEM229BQ8NBD8 167 aa10.72□□□□□ -0.69
SHMT2-228ENST00000557302 OR4X2Q8NGF9 303 aa10.72□□□□□ -0.69
SHMT2-228ENST00000557302 OSR1Q8TAX0 266 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-228ENST00000557302 GON7Q9BXV9 100 aa10.72□□□□□ -0.69
SHMT2-228ENST00000557302 FXYD6Q9H0Q3 95 aa10.72□□□□□ -0.69
SHMT2-228ENST00000557302 IGHV7-81A0A0B4J1V7 117 aa10.71□□□□□ -0.69
SHMT2-228ENST00000557302 IGLV2-23P01705 113 aa10.71□□□□□ -0.69
SHMT2-228ENST00000557302 IGF1P05019 195 aa10.71□□□□□ -0.69
SHMT2-228ENST00000557302 KIR2DS2P43631 304 aa10.71□□□□□ -0.69
SHMT2-228ENST00000557302 CATR1Q13166 79 aa10.71□□□□□ -0.69
SHMT2-228ENST00000557302 C2orf68Q2NKX9 166 aa10.71□□□□□ -0.69
SHMT2-228ENST00000557302 HIST2H2BDQ6DRA6 164 aa10.71□□□□□ -0.69
SHMT2-228ENST00000557302 C10orf99Q6UWK7 81 aa10.71□□□□□ -0.69
SHMT2-228ENST00000557302 ZNF329Q86UD4 541 aa10.71□□□□□ -0.69
SHMT2-228ENST00000557302 ARRDC1Q8N5I2 433 aa10.71□□□□□ -0.69
SHMT2-228ENST00000557302 OR4S2Q8NH73 311 aa10.71□□□□□ -0.69
SHMT2-228ENST00000557302 CLCC1Q96S66 551 aa10.71□□□□□ -0.69
SHMT2-228ENST00000557302 CITED2Q99967 270 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-228ENST00000557302 SOSTQ9BQB4 213 aa10.71□□□□□ -0.69
SHMT2-228ENST00000557302 TINAGL1Q9GZM7 467 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-228ENST00000557302 OR51J1Q9H342 316 aa10.71□□□□□ -0.69
SHMT2-228ENST00000557302 PARP11Q9NR21 331 aa10.71□□□□□ -0.69
SHMT2-228ENST00000557302 ZNF580Q9UK33 172 aa10.71□□□□□ -0.69
SHMT2-228ENST00000557302 FCN1O00602 326 aa10.7□□□□□ -0.7
SHMT2-228ENST00000557302 GSTZ1O43708 216 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-228ENST00000557302 RAB3DO95716 219 aa10.7□□□□□ -0.7
SHMT2-228ENST00000557302 CD74P04233 296 aa10.7□□□□□ -0.7
SHMT2-228ENST00000557302 CSF1P09603 554 aa10.7□□□□□ -0.7
SHMT2-228ENST00000557302 VDAC1P21796 283 aa10.7□□□□□ -0.7
SHMT2-228ENST00000557302 GNRHRP30968 328 aa10.7□□□□□ -0.7
SHMT2-228ENST00000557302 CX3CL1P78423 397 aa10.7□□□□□ -0.7
SHMT2-228ENST00000557302 CD83Q01151 205 aa10.7□□□□□ -0.7
SHMT2-228ENST00000557302 VMA21Q3ZAQ7 101 aa10.7□□□□□ -0.7
SHMT2-228ENST00000557302 PRR31Q5SQ13 230 aa10.7□□□□□ -0.7
SHMT2-228ENST00000557302 AADACL3Q5VUY0 350 aa10.7□□□□□ -0.7
SHMT2-228ENST00000557302 FOXB2Q5VYV0 432 aa10.7□□□□□ -0.7
SHMT2-228ENST00000557302 STEAP1BQ6NZ63 245 aa10.7□□□□□ -0.7
SHMT2-228ENST00000557302 NDUFA11Q86Y39 141 aa10.7□□□□□ -0.7
SHMT2-228ENST00000557302 CMTM1Q8IZ96 169 aa10.7□□□□□ -0.7
SHMT2-228ENST00000557302 COMMD1Q8N668 190 aa10.7□□□□□ -0.7
SHMT2-228ENST00000557302 GPHA2Q96T91 129 aa10.7□□□□□ -0.7
SHMT2-228ENST00000557302 TPSG1Q9NRR2 321 aa10.7□□□□□ -0.7
SHMT2-228ENST00000557302 TCRBV4S1A1TA0A5B7 111 aa10.69□□□□□ -0.7
SHMT2-228ENST00000557302 SRRM4A7MD48 611 aaKnown RBP10.69□□□□□ -0.7
SHMT2-228ENST00000557302 GPR31O00270 319 aa10.69□□□□□ -0.7
SHMT2-228ENST00000557302 ATP6V0E1O15342 81 aa10.69□□□□□ -0.7
SHMT2-228ENST00000557302 CA2P00918 260 aa10.69□□□□□ -0.7
SHMT2-228ENST00000557302 OPN1MWP04001 364 aa10.69□□□□□ -0.7
SHMT2-228ENST00000557302 OPN1MW2P0DN77 364 aa10.69□□□□□ -0.7
SHMT2-228ENST00000557302 OPN1MW3P0DN78 364 aa10.69□□□□□ -0.7
SHMT2-228ENST00000557302 UBE2KP61086 200 aa10.69□□□□□ -0.7
SHMT2-228ENST00000557302 NDPQ00604 133 aa10.69□□□□□ -0.7
SHMT2-228ENST00000557302 NSUN5P1Q3KNT7 163 aa10.69□□□□□ -0.7
SHMT2-228ENST00000557302 TCTEX1D4Q5JR98 221 aa10.69□□□□□ -0.7
SHMT2-228ENST00000557302 LPCAT3Q6P1A2 487 aa10.69□□□□□ -0.7
SHMT2-228ENST00000557302 PPP1R27Q86WC6 154 aa10.69□□□□□ -0.7
SHMT2-228ENST00000557302 SPAG16Q8N0X2 631 aa10.69□□□□□ -0.7
SHMT2-228ENST00000557302 POC5Q8NA72 575 aa10.69□□□□□ -0.7
SHMT2-228ENST00000557302 OR51H1Q8NH63 302 aa10.69□□□□□ -0.7
SHMT2-228ENST00000557302 ABHD5Q8WTS1 349 aa10.69□□□□□ -0.7
SHMT2-228ENST00000557302 MGAM2Q2M2H8 2515 aa10.69□□□□□ -0.7
SHMT2-228ENST00000557302 TRRAPQ9Y4A5 3859 aa10.68□□□□□ -0.7
SHMT2-228ENST00000557302 MEGF8Q7Z7M0 2845 aa10.68□□□□□ -0.7
SHMT2-228ENST00000557302 RBFOX2O43251 390 aaKnown RBP eCLIP10.68□□□□□ -0.75e-15■■■■■ 33.3
SHMT2-228ENST00000557302 PGLYRP1O75594 196 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-228ENST00000557302 RLN1P04808 185 aa10.68□□□□□ -0.7
SHMT2-228ENST00000557302 CRYGBP07316 175 aa10.68□□□□□ -0.7
SHMT2-228ENST00000557302 S100GP29377 79 aa10.68□□□□□ -0.7
SHMT2-228ENST00000557302 UCP3P55916 312 aa10.68□□□□□ -0.7
SHMT2-228ENST00000557302 BRWD1-AS2P59051 145 aa10.68□□□□□ -0.7
SHMT2-228ENST00000557302 MEF2DQ14814 521 aa10.68□□□□□ -0.7
SHMT2-228ENST00000557302 PYDC2Q56P42 97 aa10.68□□□□□ -0.7
SHMT2-228ENST00000557302 KHDC1LQ5JSQ8 128 aa10.68□□□□□ -0.7
SHMT2-228ENST00000557302 SPANXN2Q5MJ10 180 aa10.68□□□□□ -0.7
SHMT2-228ENST00000557302 TEX38Q6PEX7 206 aa10.68□□□□□ -0.7
SHMT2-228ENST00000557302 ZNF562Q6V9R5 426 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms