RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 BCL2L14Q9BZR8 327 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 ZNF436Q9C0F3 470 aaPredicted RBP4.18□□□□□ -1.74
SRP54-211ENST00000556445 ACTR3CQ9C0K3 210 aaPredicted RBP4.18□□□□□ -1.74
SRP54-211ENST00000556445 BANF2Q9H503 90 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 FNDC4Q9H6D8 234 aaPredicted RBP4.18□□□□□ -1.74
SRP54-211ENST00000556445 KLK13Q9UKR3 277 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 V9GYY9 64 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 FREM1Q5H8C1 2179 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 XIRP2A4UGR9 3374 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 TRIOO75962 3097 aa4.18□□□□□ -1.74
SRP54-211ENST00000556445 SPTBN5Q9NRC6 3674 aaKnown RBP4.17□□□□□ -1.74
SRP54-211ENST00000556445 UNC80Q8N2C7 3258 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 RTTNQ86VV8 2226 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 FAM186AA6NE01 2351 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 CACNA1GO43497 2377 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 A0A0A6YYD4 124 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 A0A0B4J2A0 478 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 LOC105371267A0A1B0GV96 52 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 PQLC2LA1A4F0 135 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 C5orf63A6NC05 138 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 MEIS3P1A6NDR6 274 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 ZNF850A8MQ14 1090 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 CEACAM18A8MTB9 384 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 FOXI3A8MTJ6 420 aaPredicted RBP4.17□□□□□ -1.74
SRP54-211ENST00000556445 FABP7O15540 132 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 SLC22A5O76082 557 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 OR2A4O95047 310 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 PRSS2P07478 247 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 OR4E1P0C645 316 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 ZNF14P17017 642 aaPredicted RBP4.17□□□□□ -1.74
SRP54-211ENST00000556445 CTRB1P17538 263 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 IGHV1-2P23083 117 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 GABRR1P24046 479 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 CALCRP30988 508 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 HRH1P35367 487 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 MAS1LP35410 378 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 GLP1RP43220 463 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 AMTP48728 403 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 XGP55808 180 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 RBM11P57052 281 aaKnown RBP4.17□□□□□ -1.74
SRP54-211ENST00000556445 PPP1CBP62140 327 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 SRSF6Q13247 344 aaKnown RBP4.17□□□□□ -1.74
SRP54-211ENST00000556445 GABRA6Q16445 453 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 TMEM128Q5BJH2 165 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 TMEM255AQ5JRV8 349 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 CTRB2Q6GPI1 263 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 FAAP20Q6NZ36 180 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 LYG2Q86SG7 212 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 SLC25A42Q86VD7 318 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 TPRX1Q8N7U7 411 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 C15orf54Q8N8G6 183 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 OR5AP2Q8NGF4 316 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 BAALCQ8WXS3 180 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 GTF3AQ92664 365 aaKnown RBP4.17□□□□□ -1.74
SRP54-211ENST00000556445 WBP1Q96G27 269 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 SDSLQ96GA7 329 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 ARHGAP5-AS1Q96IT6 56 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 ZNF75AQ96N20 296 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 OR2A7Q96R45 310 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 PHB2Q99623 299 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 NKX3-1Q99801 234 aaPredicted RBP4.17□□□□□ -1.74
SRP54-211ENST00000556445 CMSS1Q9BQ75 279 aaKnown RBP4.17□□□□□ -1.74
SRP54-211ENST00000556445 RSG1Q9BU20 258 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 RTL8AQ9BWD3 113 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 SFXN3Q9BWM7 321 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 OR51B6Q9H340 312 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 ZNF286AQ9HBT8 521 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 SHPKQ9UHJ6 478 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 POU2F3Q9UKI9 436 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 MGAT4AQ9UM21 535 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 C14orf166Q9Y224 244 aaKnown RBP4.17□□□□□ -1.74
SRP54-211ENST00000556445 ST3GAL6Q9Y274 331 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 OR2W1Q9Y3N9 320 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 CSAG2Q9Y5P2 127 aa4.17□□□□□ -1.74
SRP54-211ENST00000556445 GTF3C1Q12789 2109 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 DOCK7Q96N67 2140 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 IGKV1-27A0A075B6S5 117 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 IGHV4-28A0A0C4DH34 117 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 KIR2DS1A0A191URI9 304 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 OR5H1A6NKK0 313 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 HMSDA8MTL9 139 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 IQCF6A8MYZ5 107 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 MCRIP1C9JLW8 97 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 F5H5P2 479 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 J3QT63 122 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 K7ENP7 123 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 PPIHO43447 177 aaKnown RBP4.16□□□□□ -1.74
SRP54-211ENST00000556445 DUS4LO95620 317 aaKnown RBP4.16□□□□□ -1.74
SRP54-211ENST00000556445 IGKV3-15P01624 115 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 HLA-AP01891 365 aaKnown RBP4.16□□□□□ -1.74
SRP54-211ENST00000556445 HLA-GP17693 338 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 CD34P28906 385 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 OPRM1P35372 400 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 MDH2P40926 338 aaKnown RBP4.16□□□□□ -1.74
SRP54-211ENST00000556445 KIR2DS4P43632 304 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 IDH3GP51553 393 aaPredicted RBP4.16□□□□□ -1.74
SRP54-211ENST00000556445 GPM6AP51674 278 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 NKX2-5P52952 324 aaPredicted RBP4.16□□□□□ -1.74
SRP54-211ENST00000556445 FGF12P61328 243 aa4.16□□□□□ -1.74
SRP54-211ENST00000556445 RPS23P62266 143 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms