RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 EIF4EP06730 217 aaKnown RBP9.02□□□□□ -0.97
SLIRP-205ENST00000556310 IGKV1-13P0DP09 117 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 RORCP51449 518 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 ECSCRQ19T08 205 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 BEAN1Q3B7T3 259 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 C19orf54Q5BKX5 351 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 KPRPQ5T749 579 aaPredicted RBP9.02□□□□□ -0.97
SLIRP-205ENST00000556310 GPR107Q5VW38 600 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 ZNF562Q6V9R5 426 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 LCNL1Q6ZST4 164 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 C18orf65Q6ZTR6 163 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 GPR141Q7Z602 305 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 TCTEX1D1Q8N7M0 179 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 BVESQ8NE79 360 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 MYOZ3Q8TDC0 251 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 RHOVQ96L33 236 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 IFT46Q9NQC8 304 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 TPSG1Q9NRR2 321 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 NECAP2Q9NVZ3 263 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 COMMD3Q9UBI1 195 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 ANAPC10Q9UM13 185 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 RBMX2Q9Y388 322 aaKnown RBP9.02□□□□□ -0.97
SLIRP-205ENST00000556310 FBXO7Q9Y3I1 522 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 WSB1Q9Y6I7 421 aa9.02□□□□□ -0.97
SLIRP-205ENST00000556310 MEIS3P1A6NDR6 274 aa9.01□□□□□ -0.97
SLIRP-205ENST00000556310 J3QRK9 145 aa9.01□□□□□ -0.97
SLIRP-205ENST00000556310 FCN1O00602 326 aa9.01□□□□□ -0.97
SLIRP-205ENST00000556310 SHOXO15266 292 aa9.01□□□□□ -0.97
SLIRP-205ENST00000556310 IGLV1-40P01703 118 aa9.01□□□□□ -0.97
SLIRP-205ENST00000556310 IGLV2-14P01704 120 aa9.01□□□□□ -0.97
SLIRP-205ENST00000556310 CDX1P47902 265 aaPredicted RBP9.01□□□□□ -0.97
SLIRP-205ENST00000556310 MSMO1Q15800 293 aa9.01□□□□□ -0.97
SLIRP-205ENST00000556310 KCTD9Q7L273 389 aa9.01□□□□□ -0.97
SLIRP-205ENST00000556310 OVCH2Q7RTZ1 564 aa9.01□□□□□ -0.97
SLIRP-205ENST00000556310 PPP1R27Q86WC6 154 aa9.01□□□□□ -0.97
SLIRP-205ENST00000556310 LINC00482Q8N8I6 264 aa9.01□□□□□ -0.97
SLIRP-205ENST00000556310 MINDY2Q8NBR6 621 aa9.01□□□□□ -0.97
SLIRP-205ENST00000556310 OR5AP2Q8NGF4 316 aa9.01□□□□□ -0.97
SLIRP-205ENST00000556310 OSR1Q8TAX0 266 aaPredicted RBP9.01□□□□□ -0.97
SLIRP-205ENST00000556310 ABHD5Q8WTS1 349 aa9.01□□□□□ -0.97
SLIRP-205ENST00000556310 AP3S1Q92572 193 aa9.01□□□□□ -0.97
SLIRP-205ENST00000556310 ARPC1AQ92747 370 aa9.01□□□□□ -0.97
SLIRP-205ENST00000556310 P2RX4Q99571 388 aa9.01□□□□□ -0.97
SLIRP-205ENST00000556310 HSD17B10Q99714 261 aaKnown RBP9.01□□□□□ -0.97
SLIRP-205ENST00000556310 FOXA2Q9Y261 457 aaPredicted RBP9.01□□□□□ -0.97
SLIRP-205ENST00000556310 MRPS7Q9Y2R9 242 aaKnown RBP9.01□□□□□ -0.97
SLIRP-205ENST00000556310 PRELID3BQ9Y3B1 194 aa9.01□□□□□ -0.97
SLIRP-205ENST00000556310 TNCP24821 2201 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 SMIM31A0A1B0GVY4 71 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 A0A1W2PN81 502 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 CRYZL1O95825 349 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 PPYP01298 95 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 FCER2P06734 321 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 CRYGBP07316 175 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 EGR2P11161 476 aaPredicted RBP9□□□□□ -0.97
SLIRP-205ENST00000556310 AADACP22760 399 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 FCGR2CP31995 323 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 PRSS3P35030 304 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 CHRNA7P36544 502 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 MYCNOSP40205 109 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 TMEM267Q0VDI3 215 aaPredicted RBP9□□□□□ -0.97
SLIRP-205ENST00000556310 EIF4EBP1Q13541 118 aaPredicted RBP9□□□□□ -0.97
SLIRP-205ENST00000556310 CDK10Q15131 360 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 VMA21Q3ZAQ7 101 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 MZT2AQ6P582 158 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 TMEM65Q6PI78 240 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 MRPL41Q8IXM3 137 aaKnown RBP9□□□□□ -0.97
SLIRP-205ENST00000556310 C4orf3Q8WVX3 66 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 RCC1LQ96I51 464 aaKnown RBP9□□□□□ -0.97
SLIRP-205ENST00000556310 CLCC1Q96S66 551 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 NUBP2Q9Y5Y2 271 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 A3GALT2U3KPV4 340 aa9□□□□□ -0.97
SLIRP-205ENST00000556310 SRRM4A7MD48 611 aaKnown RBP8.99□□□□□ -0.97
SLIRP-205ENST00000556310 ARPC1BO15143 372 aaKnown RBP8.99□□□□□ -0.97
SLIRP-205ENST00000556310 SOX15O60248 233 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 HPGDSO60760 199 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 DUS4LO95620 317 aaKnown RBP8.99□□□□□ -0.97
SLIRP-205ENST00000556310 ZNF182P17025 639 aaPredicted RBP8.99□□□□□ -0.97
SLIRP-205ENST00000556310 NAT1P18440 290 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 ELK1P19419 428 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 TAS2R46P59540 309 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 UBE2KP61086 200 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 RPL30P62888 115 aaKnown RBP8.99□□□□□ -0.97
SLIRP-205ENST00000556310 SSBP2P81877 361 aaPredicted RBP8.99□□□□□ -0.97
SLIRP-205ENST00000556310 PDLIM3Q53GG5 364 aaPredicted RBP8.99□□□□□ -0.97
SLIRP-205ENST00000556310 AKIRIN2Q53H80 203 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 PYHIN1Q6K0P9 492 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 ZNF66Q6ZN08 573 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 OR4S2Q8NH73 311 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 GRPEL2Q8TAA5 225 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 GPX8Q8TED1 209 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 SECTM1Q8WVN6 248 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 TCTEX1D2Q8WW35 142 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 GIMAP1Q8WWP7 306 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 RAX2Q96IS3 184 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 UBE2E2Q96LR5 201 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 FAM103A1Q9BTL3 118 aaKnown RBP8.99□□□□□ -0.97
SLIRP-205ENST00000556310 KLK15Q9H2R5 256 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 SCPEP1Q9HB40 452 aa8.99□□□□□ -0.97
SLIRP-205ENST00000556310 EHFQ9NZC4 300 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms