RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 MRPS11P82912 194 aaKnown RBP12.5□□□□□ -0.41
NEK9-209ENST00000556170 ACOT6Q3I5F7 207 aaPredicted RBP12.5□□□□□ -0.41
NEK9-209ENST00000556170 RPL39P5Q59GN2 51 aa12.5□□□□□ -0.41
NEK9-209ENST00000556170 ARL6IP6Q8N6S5 226 aa12.5□□□□□ -0.41
NEK9-209ENST00000556170 LRFN3Q9BTN0 628 aa12.5□□□□□ -0.41
NEK9-209ENST00000556170 TMEM147Q9BVK8 224 aa12.5□□□□□ -0.41
NEK9-209ENST00000556170 METTL1Q9UBP6 276 aaKnown RBP12.5□□□□□ -0.41
NEK9-209ENST00000556170 AHRRA9YTQ3 701 aa12.5□□□□□ -0.41
NEK9-209ENST00000556170 CYB5R3P00387 301 aaPredicted RBP12.5□□□□□ -0.41
NEK9-209ENST00000556170 KIR2DL2P43627 348 aaPredicted RBP12.5□□□□□ -0.41
NEK9-209ENST00000556170 ZNF645Q8N7E2 425 aa12.5□□□□□ -0.41
NEK9-209ENST00000556170 ABHD5Q8WTS1 349 aa12.5□□□□□ -0.41
NEK9-209ENST00000556170 TAF15Q92804 592 aaKnown RBP eCLIP12.5□□□□□ -0.41
NEK9-209ENST00000556170 PACRGQ96M98 296 aaPredicted RBP12.5□□□□□ -0.41
NEK9-209ENST00000556170 PPP5D1E7EU14 171 aa12.5□□□□□ -0.41
NEK9-209ENST00000556170 M0R143 59 aa12.5□□□□□ -0.41
NEK9-209ENST00000556170 GYPAP02724 150 aa12.5□□□□□ -0.41
NEK9-209ENST00000556170 P2RY6Q15077 328 aa12.5□□□□□ -0.41
NEK9-209ENST00000556170 ACP7Q6ZNF0 438 aa12.5□□□□□ -0.41
NEK9-209ENST00000556170 OR10X1Q8NGY0 326 aa12.5□□□□□ -0.41
NEK9-209ENST00000556170 RPH3ALQ9UNE2 315 aa12.5□□□□□ -0.41
NEK9-209ENST00000556170 MARCH11A6NNE9 402 aa12.49□□□□□ -0.41
NEK9-209ENST00000556170 SELLP14151 372 aa12.49□□□□□ -0.41
NEK9-209ENST00000556170 EGR1P18146 543 aa12.49□□□□□ -0.41
NEK9-209ENST00000556170 CD82P27701 267 aa12.49□□□□□ -0.41
NEK9-209ENST00000556170 SSX7Q7RTT5 188 aa12.49□□□□□ -0.41
NEK9-209ENST00000556170 IGHV2OR16-5A0A0B4J2B6 119 aa12.49□□□□□ -0.41
NEK9-209ENST00000556170 HABP2Q14520 560 aaPredicted RBP12.49□□□□□ -0.41
NEK9-209ENST00000556170 OR13D1Q8NGV5 346 aa12.49□□□□□ -0.41
NEK9-209ENST00000556170 TMEM37Q8WXS4 190 aa12.49□□□□□ -0.41
NEK9-209ENST00000556170 VSIRQ9H7M9 311 aa12.49□□□□□ -0.41
NEK9-209ENST00000556170 NKX6-3A6NJ46 265 aa12.49□□□□□ -0.41
NEK9-209ENST00000556170 CLDN34H7C241 214 aa12.49□□□□□ -0.41
NEK9-209ENST00000556170 OR7C2O60412 319 aa12.49□□□□□ -0.41
NEK9-209ENST00000556170 MT-CO2P00403 227 aa12.49□□□□□ -0.41
NEK9-209ENST00000556170 IL15RAQ13261 267 aa12.49□□□□□ -0.41
NEK9-209ENST00000556170 PCSK4Q6UW60 755 aa12.49□□□□□ -0.41
NEK9-209ENST00000556170 ACY3Q96HD9 319 aa12.49□□□□□ -0.41
NEK9-209ENST00000556170 TMEM68Q96MH6 324 aa12.49□□□□□ -0.41
NEK9-209ENST00000556170 CDC34P49427 236 aaPredicted RBP12.48□□□□□ -0.41
NEK9-209ENST00000556170 ACSF3Q4G176 576 aaPredicted RBP12.48□□□□□ -0.41
NEK9-209ENST00000556170 NMSQ5H8A3 153 aa12.48□□□□□ -0.41
NEK9-209ENST00000556170 ZNF497Q6ZNH5 498 aa12.48□□□□□ -0.41
NEK9-209ENST00000556170 ABHD12Q8N2K0 398 aa12.48□□□□□ -0.41
NEK9-209ENST00000556170 GTF3AQ92664 365 aaKnown RBP12.48□□□□□ -0.41
NEK9-209ENST00000556170 FAM210BQ96KR6 192 aa12.48□□□□□ -0.41
NEK9-209ENST00000556170 EGLN1Q9GZT9 426 aa12.48□□□□□ -0.41
NEK9-209ENST00000556170 ZDHHC8Q9ULC8 765 aa12.48□□□□□ -0.41
NEK9-209ENST00000556170 LYL1P12980 280 aa12.48□□□□□ -0.41
NEK9-209ENST00000556170 TMEM108Q6UXF1 575 aa12.48□□□□□ -0.41
NEK9-209ENST00000556170 WDR82Q6UXN9 313 aa12.48□□□□□ -0.41
NEK9-209ENST00000556170 COMMD5Q9GZQ3 224 aa12.48□□□□□ -0.41
NEK9-209ENST00000556170 TCF21O43680 179 aa12.48□□□□□ -0.41
NEK9-209ENST00000556170 CD5P06127 495 aa12.48□□□□□ -0.41
NEK9-209ENST00000556170 APELAP0DMC3 54 aa12.48□□□□□ -0.41
NEK9-209ENST00000556170 BCL2P10415 239 aa12.48□□□□□ -0.41
NEK9-209ENST00000556170 TMEM241Q24JQ0 296 aa12.48□□□□□ -0.41
NEK9-209ENST00000556170 RCC1LQ96I51 464 aaKnown RBP12.48□□□□□ -0.41
NEK9-209ENST00000556170 SNX22Q96L94 193 aa12.48□□□□□ -0.41
NEK9-209ENST00000556170 OR6C3Q9NZP0 311 aa12.48□□□□□ -0.41
NEK9-209ENST00000556170 NCOR2Q9Y618 2525 aa12.47□□□□□ -0.41
NEK9-209ENST00000556170 WDR86Q86TI4 376 aa12.47□□□□□ -0.41
NEK9-209ENST00000556170 HSD17B10Q99714 261 aaKnown RBP12.47□□□□□ -0.41
NEK9-209ENST00000556170 TRAV38-1A0A0B4J264 116 aa12.47□□□□□ -0.41
NEK9-209ENST00000556170 IQCF6A8MYZ5 107 aa12.47□□□□□ -0.41
NEK9-209ENST00000556170 K7N7A8 449 aa12.47□□□□□ -0.41
NEK9-209ENST00000556170 IGKV1-5P01602 117 aa12.47□□□□□ -0.41
NEK9-209ENST00000556170 RPL30P62888 115 aaKnown RBP12.47□□□□□ -0.41
NEK9-209ENST00000556170 IL22RA2Q969J5 263 aa12.47□□□□□ -0.41
NEK9-209ENST00000556170 DOK5Q9P104 306 aa12.47□□□□□ -0.41
NEK9-209ENST00000556170 RNF7Q9UBF6 113 aa12.47□□□□□ -0.41
NEK9-209ENST00000556170 MGST3O14880 152 aa12.47□□□□□ -0.41
NEK9-209ENST00000556170 MLNRO43193 412 aa12.47□□□□□ -0.41
NEK9-209ENST00000556170 VAX2Q9UIW0 290 aa12.47□□□□□ -0.41
NEK9-209ENST00000556170 CREBBPQ92793 2442 aa12.47□□□□□ -0.41
NEK9-209ENST00000556170 ARHGAP21Q5T5U3 1957 aa12.47□□□□□ -0.41
NEK9-209ENST00000556170 SS18L1O75177 396 aaPredicted RBP12.46□□□□□ -0.41
NEK9-209ENST00000556170 KHDC3LQ587J8 217 aa12.46□□□□□ -0.41
NEK9-209ENST00000556170 RPRMLQ8N4K4 120 aa12.46□□□□□ -0.41
NEK9-209ENST00000556170 ELOVL1Q9BW60 279 aa12.46□□□□□ -0.41
NEK9-209ENST00000556170 TGIF2-C20orf24A0A0A6YYL0 155 aa12.46□□□□□ -0.41
NEK9-209ENST00000556170 ADH4P08319 380 aa12.46□□□□□ -0.41
NEK9-209ENST00000556170 WT1P19544 449 aaPredicted RBP12.46□□□□□ -0.41
NEK9-209ENST00000556170 TMEM41BQ5BJD5 291 aa12.46□□□□□ -0.41
NEK9-209ENST00000556170 WDR25Q64LD2 544 aaPredicted RBP12.46□□□□□ -0.41
NEK9-209ENST00000556170 Q6P435 159 aa12.46□□□□□ -0.41
NEK9-209ENST00000556170 ZDHHC11Q9H8X9 412 aa12.46□□□□□ -0.41
NEK9-209ENST00000556170 YLPM1P49750 1951 aaKnown RBP12.46□□□□□ -0.41
NEK9-209ENST00000556170 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.46□□□□□ -0.413e-8■■■■□ 24.8
NEK9-209ENST00000556170 MDFIC2A0A1B0GVS7 189 aa12.46□□□□□ -0.42
NEK9-209ENST00000556170 APOA2P02652 100 aa12.46□□□□□ -0.42
NEK9-209ENST00000556170 RTL8BQ17RB0 113 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 STUMQ69YW2 141 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 LSM10Q969L4 123 aaKnown RBP12.45□□□□□ -0.42
NEK9-209ENST00000556170 RYDENQ9NUL5 291 aaKnown RBP12.45□□□□□ -0.42
NEK9-209ENST00000556170 SPINK4O60575 86 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 MGST1P10620 155 aaKnown RBP12.45□□□□□ -0.42
NEK9-209ENST00000556170 TNFRSF1AP19438 455 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 GNB1P62873 340 aa12.45□□□□□ -0.42
NEK9-209ENST00000556170 BSXQ3C1V8 233 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms