RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 KCTD12Q96CX2 325 aaKnown RBP12.51□□□□□ -0.41
CHGA-204ENST00000556076 SRRM4A7MD48 611 aaKnown RBP12.5□□□□□ -0.41
CHGA-204ENST00000556076 APOA2P02652 100 aa12.5□□□□□ -0.41
CHGA-204ENST00000556076 CTXN2P0C2S0 81 aa12.5□□□□□ -0.41
CHGA-204ENST00000556076 SMIM18P0DKX4 95 aa12.5□□□□□ -0.41
CHGA-204ENST00000556076 APELAP0DMC3 54 aa12.5□□□□□ -0.41
CHGA-204ENST00000556076 RUNX1Q01196 453 aa12.5□□□□□ -0.41
CHGA-204ENST00000556076 ACTBL2Q562R1 376 aa12.5□□□□□ -0.41
CHGA-204ENST00000556076 OR5T1Q8NG75 326 aa12.5□□□□□ -0.41
CHGA-204ENST00000556076 OR5H6Q8NGV6 325 aa12.5□□□□□ -0.41
CHGA-204ENST00000556076 ARPC1AQ92747 370 aa12.5□□□□□ -0.41
CHGA-204ENST00000556076 FLYWCH2Q96CP2 140 aaKnown RBP12.5□□□□□ -0.41
CHGA-204ENST00000556076 TSNAXQ99598 290 aaKnown RBP12.5□□□□□ -0.41
CHGA-204ENST00000556076 ST6GALNAC5Q9BVH7 336 aa12.5□□□□□ -0.41
CHGA-204ENST00000556076 TMEM235A6NFC5 223 aa12.49□□□□□ -0.41
CHGA-204ENST00000556076 OR8U8P0C7N1 319 aa12.49□□□□□ -0.41
CHGA-204ENST00000556076 TPPP2P59282 170 aa12.49□□□□□ -0.41
CHGA-204ENST00000556076 FXYD3Q14802 87 aa12.49□□□□□ -0.41
CHGA-204ENST00000556076 MRGPRG-AS1Q2M3A8 158 aa12.49□□□□□ -0.41
CHGA-204ENST00000556076 ZNF562Q6V9R5 426 aa12.49□□□□□ -0.41
CHGA-204ENST00000556076 ANKRD13BQ86YJ7 626 aa12.49□□□□□ -0.41
CHGA-204ENST00000556076 PDPNQ86YL7 162 aa12.49□□□□□ -0.41
CHGA-204ENST00000556076 H1FOOQ8IZA3 346 aaPredicted RBP12.49□□□□□ -0.41
CHGA-204ENST00000556076 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.49□□□□□ -0.41
CHGA-204ENST00000556076 SLC25A46Q96AG3 418 aa12.49□□□□□ -0.41
CHGA-204ENST00000556076 SLC25A38Q96DW6 304 aa12.49□□□□□ -0.41
CHGA-204ENST00000556076 S100A16Q96FQ6 103 aaKnown RBP12.49□□□□□ -0.41
CHGA-204ENST00000556076 B9D2Q9BPU9 175 aa12.49□□□□□ -0.41
CHGA-204ENST00000556076 GINS4Q9BRT9 223 aa12.49□□□□□ -0.41
CHGA-204ENST00000556076 RBM7Q9Y580 266 aaKnown RBP12.49□□□□□ -0.41
CHGA-204ENST00000556076 TNCP24821 2201 aa12.49□□□□□ -0.41
CHGA-204ENST00000556076 TRAV18A0A075B6X5 111 aa12.48□□□□□ -0.41
CHGA-204ENST00000556076 LINC00473A8K010 186 aa12.48□□□□□ -0.41
CHGA-204ENST00000556076 SSX5O60225 188 aa12.48□□□□□ -0.41
CHGA-204ENST00000556076 CRYGBP07316 175 aa12.48□□□□□ -0.41
CHGA-204ENST00000556076 TGFBR1P36897 503 aa12.48□□□□□ -0.41
CHGA-204ENST00000556076 TAGLNQ01995 201 aaKnown RBP12.48□□□□□ -0.41
CHGA-204ENST00000556076 UBE2NLQ5JXB2 153 aa12.48□□□□□ -0.41
CHGA-204ENST00000556076 IDO2Q6ZQW0 420 aa12.48□□□□□ -0.41
CHGA-204ENST00000556076 HAPLN4Q86UW8 402 aa12.48□□□□□ -0.41
CHGA-204ENST00000556076 HARBI1Q96MB7 349 aa12.48□□□□□ -0.41
CHGA-204ENST00000556076 RNF5Q99942 180 aa12.48□□□□□ -0.41
CHGA-204ENST00000556076 LSM4Q9Y4Z0 139 aaKnown RBP12.48□□□□□ -0.41
CHGA-204ENST00000556076 STAB2Q8WWQ8 2551 aa12.48□□□□□ -0.41
CHGA-204ENST00000556076 SORL1Q92673 2214 aa12.47□□□□□ -0.41
CHGA-204ENST00000556076 IGKV1D-13A0A0B4J2D9 117 aa12.47□□□□□ -0.41
CHGA-204ENST00000556076 OVOL1O14753 267 aa12.47□□□□□ -0.41
CHGA-204ENST00000556076 SPDEFO95238 335 aa12.47□□□□□ -0.41
CHGA-204ENST00000556076 LY86O95711 162 aa12.47□□□□□ -0.41
CHGA-204ENST00000556076 TRGV3P03979 118 aa12.47□□□□□ -0.41
CHGA-204ENST00000556076 FCER2P06734 321 aa12.47□□□□□ -0.41
CHGA-204ENST00000556076 LGALS1P09382 135 aaKnown RBP12.47□□□□□ -0.41
CHGA-204ENST00000556076 IGKV1-13P0DP09 117 aa12.47□□□□□ -0.41
CHGA-204ENST00000556076 PTHLHP12272 177 aa12.47□□□□□ -0.41
CHGA-204ENST00000556076 NFYAP23511 347 aaPredicted RBP12.47□□□□□ -0.41
CHGA-204ENST00000556076 VBP1P61758 197 aa12.47□□□□□ -0.41
CHGA-204ENST00000556076 NCS1P62166 190 aa12.47□□□□□ -0.41
CHGA-204ENST00000556076 AKIRIN2Q53H80 203 aa12.47□□□□□ -0.41
CHGA-204ENST00000556076 OR2B11Q5JQS5 317 aa12.47□□□□□ -0.41
CHGA-204ENST00000556076 VAX1Q5SQQ9 334 aa12.47□□□□□ -0.41
CHGA-204ENST00000556076 GPR141Q7Z602 305 aa12.47□□□□□ -0.41
CHGA-204ENST00000556076 ACOT12Q8WYK0 555 aa12.47□□□□□ -0.41
CHGA-204ENST00000556076 ASCL2Q99929 193 aa12.47□□□□□ -0.41
CHGA-204ENST00000556076 ZNF355PQ9NSJ1 428 aa12.47□□□□□ -0.41
CHGA-204ENST00000556076 LINC01619G3V211 115 aa12.46□□□□□ -0.41
CHGA-204ENST00000556076 SHOXO15266 292 aa12.46□□□□□ -0.41
CHGA-204ENST00000556076 XRCC3O43542 346 aa12.46□□□□□ -0.41
CHGA-204ENST00000556076 RBMXL2O75526 392 aaKnown RBP12.46□□□□□ -0.41
CHGA-204ENST00000556076 CNIH1O95406 144 aa12.46□□□□□ -0.41
CHGA-204ENST00000556076 CRYZL1O95825 349 aa12.46□□□□□ -0.41
CHGA-204ENST00000556076 CBX5P45973 191 aa12.46□□□□□ -0.41
CHGA-204ENST00000556076 TMEM267Q0VDI3 215 aaPredicted RBP12.46□□□□□ -0.41
CHGA-204ENST00000556076 CNIH2Q6PI25 160 aa12.46□□□□□ -0.41
CHGA-204ENST00000556076 DDB2Q92466 427 aa12.46□□□□□ -0.41
CHGA-204ENST00000556076 CMTM3Q96MX0 182 aa12.46□□□□□ -0.41
CHGA-204ENST00000556076 GPHA2Q96T91 129 aa12.46□□□□□ -0.41
CHGA-204ENST00000556076 AUNIPQ9H7T9 357 aa12.46□□□□□ -0.41
CHGA-204ENST00000556076 ZNF256Q9Y2P7 627 aaPredicted RBP12.46□□□□□ -0.41
CHGA-204ENST00000556076 ANKRD34BA5PLL1 514 aa12.45□□□□□ -0.42
CHGA-204ENST00000556076 RAMP3O60896 148 aa12.45□□□□□ -0.42
CHGA-204ENST00000556076 SAP30O75446 220 aa12.45□□□□□ -0.42
CHGA-204ENST00000556076 GABARAPO95166 117 aa12.45□□□□□ -0.42
CHGA-204ENST00000556076 DUTP33316 252 aaKnown RBP12.45□□□□□ -0.42
CHGA-204ENST00000556076 ALDH3B2P48448 385 aa12.45□□□□□ -0.42
CHGA-204ENST00000556076 RORCP51449 518 aa12.45□□□□□ -0.42
CHGA-204ENST00000556076 RPL30P62888 115 aaKnown RBP12.45□□□□□ -0.42
CHGA-204ENST00000556076 TMEM177Q53S58 311 aa12.45□□□□□ -0.42
CHGA-204ENST00000556076 GPR107Q5VW38 600 aa12.45□□□□□ -0.42
CHGA-204ENST00000556076 TCTEX1D1Q8N7M0 179 aa12.45□□□□□ -0.42
CHGA-204ENST00000556076 SAMD12Q8N8I0 201 aa12.45□□□□□ -0.42
CHGA-204ENST00000556076 RHOVQ96L33 236 aa12.45□□□□□ -0.42
CHGA-204ENST00000556076 ANXA10Q9UJ72 324 aa12.45□□□□□ -0.42
CHGA-204ENST00000556076 ADAM30Q9UKF2 790 aa12.45□□□□□ -0.42
CHGA-204ENST00000556076 SLC22A5O76082 557 aa12.44□□□□□ -0.42
CHGA-204ENST00000556076 CBX3Q13185 183 aa12.44□□□□□ -0.42
CHGA-204ENST00000556076 RTL8BQ17RB0 113 aa12.44□□□□□ -0.42
CHGA-204ENST00000556076 C10orf55Q5SWW7 151 aa12.44□□□□□ -0.42
CHGA-204ENST00000556076 MZT2AQ6P582 158 aa12.44□□□□□ -0.42
CHGA-204ENST00000556076 GVQW1Q8N7I0 195 aa12.44□□□□□ -0.42
CHGA-204ENST00000556076 POC5Q8NA72 575 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms