RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, human

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC2-208	ENST00000556009	PDPN	Q86YL7	162 aa		13.61	□□□□□ -0.23
NPC2-208	ENST00000556009	MS4A10	Q96PG2	267 aa		13.61	□□□□□ -0.23
NPC2-208	ENST00000556009	CLCC1	Q96S66	551 aa		13.61	□□□□□ -0.23
NPC2-208	ENST00000556009	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.61	□□□□□ -0.23
NPC2-208	ENST00000556009	ZMAT4	Q9H898	229 aa		13.61	□□□□□ -0.23
NPC2-208	ENST00000556009	TMEM272	A0A1B0GTI8	110 aa		13.6	□□□□□ -0.23
NPC2-208	ENST00000556009		H3BUA1	57 aa		13.6	□□□□□ -0.23
NPC2-208	ENST00000556009	CA2	P00918	260 aa		13.6	□□□□□ -0.23
NPC2-208	ENST00000556009	IGKV1-16	P04430	117 aa		13.6	□□□□□ -0.23
NPC2-208	ENST00000556009	SNRPB	P14678	240 aa	Known RBP	13.6	□□□□□ -0.23
NPC2-208	ENST00000556009	RORC	P51449	518 aa		13.6	□□□□□ -0.23
NPC2-208	ENST00000556009	TPPP2	P59282	170 aa		13.6	□□□□□ -0.23
NPC2-208	ENST00000556009	ZNF383	Q8NA42	475 aa		13.6	□□□□□ -0.23
NPC2-208	ENST00000556009	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.6	□□□□□ -0.23
NPC2-208	ENST00000556009	ELOVL1	Q9BW60	279 aa		13.6	□□□□□ -0.23
NPC2-208	ENST00000556009	C12orf4	Q9NQ89	552 aa		13.6	□□□□□ -0.23
NPC2-208	ENST00000556009	ZNF221	Q9UK13	617 aa		13.6	□□□□□ -0.23
NPC2-208	ENST00000556009		A8MZ25	164 aa		13.59	□□□□□ -0.23
NPC2-208	ENST00000556009	LDLRAD4	O15165	306 aa		13.59	□□□□□ -0.23
NPC2-208	ENST00000556009	TMEM127	O75204	238 aa		13.59	□□□□□ -0.23
NPC2-208	ENST00000556009	BRI3	O95415	125 aa		13.59	□□□□□ -0.23
NPC2-208	ENST00000556009	IGLV1-51	P01701	117 aa		13.59	□□□□□ -0.23
NPC2-208	ENST00000556009	TRGV3	P03979	118 aa		13.59	□□□□□ -0.23
NPC2-208	ENST00000556009	RPS16	P62249	146 aa	Known RBP	13.59	□□□□□ -0.23
NPC2-208	ENST00000556009	PLA2G7	Q13093	441 aa		13.59	□□□□□ -0.23
NPC2-208	ENST00000556009	FXYD3	Q14802	87 aa		13.59	□□□□□ -0.23
NPC2-208	ENST00000556009		Q8N1Y9	231 aa		13.59	□□□□□ -0.23
NPC2-208	ENST00000556009	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.59	□□□□□ -0.23
NPC2-208	ENST00000556009	LGALS14	Q8TCE9	139 aa		13.59	□□□□□ -0.23
NPC2-208	ENST00000556009	DGCR14	Q96DF8	476 aa	Known RBP	13.59	□□□□□ -0.23
NPC2-208	ENST00000556009	RANGRF	Q9HD47	186 aa	Predicted RBP	13.59	□□□□□ -0.23
NPC2-208	ENST00000556009	RAB22A	Q9UL26	194 aa		13.59	□□□□□ -0.23
NPC2-208	ENST00000556009	CSMD3	Q7Z407	3707 aa		13.59	□□□□□ -0.23
NPC2-208	ENST00000556009	LYST	Q99698	3801 aa		13.59	□□□□□ -0.23
NPC2-208	ENST00000556009	IGKV1-6	A0A0C4DH72	117 aa		13.58	□□□□□ -0.24
NPC2-208	ENST00000556009		A0A0G2JLM5	398 aa		13.58	□□□□□ -0.24
NPC2-208	ENST00000556009	TRDC	B7Z8K6	153 aa		13.58	□□□□□ -0.24
NPC2-208	ENST00000556009	APOA2	P02652	100 aa		13.58	□□□□□ -0.24
NPC2-208	ENST00000556009	ZP3	P21754	424 aa		13.58	□□□□□ -0.24
NPC2-208	ENST00000556009	LGALS7	P47929	136 aa		13.58	□□□□□ -0.24
NPC2-208	ENST00000556009	LINC00205	P59089	165 aa		13.58	□□□□□ -0.24
NPC2-208	ENST00000556009	MOGAT2	Q3SYC2	334 aa		13.58	□□□□□ -0.24
NPC2-208	ENST00000556009	POC5	Q8NA72	575 aa		13.58	□□□□□ -0.24
NPC2-208	ENST00000556009	DYNC2LI1	Q8TCX1	351 aa		13.58	□□□□□ -0.24
NPC2-208	ENST00000556009	ARHGAP5-AS1	Q96IT6	56 aa		13.58	□□□□□ -0.24
NPC2-208	ENST00000556009	TMEM68	Q96MH6	324 aa		13.58	□□□□□ -0.24
NPC2-208	ENST00000556009	CITED4	Q96RK1	184 aa		13.58	□□□□□ -0.24
NPC2-208	ENST00000556009	CMSS1	Q9BQ75	279 aa	Known RBP	13.58	□□□□□ -0.24
NPC2-208	ENST00000556009	TM2D3	Q9BRN9	247 aa		13.58	□□□□□ -0.24
NPC2-208	ENST00000556009		A6NHS1	94 aa		13.57	□□□□□ -0.24
NPC2-208	ENST00000556009	LYL1	P12980	280 aa		13.57	□□□□□ -0.24
NPC2-208	ENST00000556009	ZNF182	P17025	639 aa	Predicted RBP	13.57	□□□□□ -0.24
NPC2-208	ENST00000556009	RAB6A	P20340	208 aa		13.57	□□□□□ -0.24
NPC2-208	ENST00000556009	SCAND1	P57086	179 aa		13.57	□□□□□ -0.24
NPC2-208	ENST00000556009	SSBP2	P81877	361 aa	Predicted RBP	13.57	□□□□□ -0.24
NPC2-208	ENST00000556009	KLF5	Q13887	457 aa	Predicted RBP	13.57	□□□□□ -0.24
NPC2-208	ENST00000556009	OR5H6	Q8NGV6	325 aa		13.57	□□□□□ -0.24
NPC2-208	ENST00000556009	KCTD12	Q96CX2	325 aa	Known RBP	13.57	□□□□□ -0.24
NPC2-208	ENST00000556009	PECR	Q9BY49	303 aa		13.57	□□□□□ -0.24
NPC2-208	ENST00000556009	C19orf73	Q9NVV2	129 aa		13.57	□□□□□ -0.24
NPC2-208	ENST00000556009	RDH8	Q9NYR8	311 aa		13.57	□□□□□ -0.24
NPC2-208	ENST00000556009	CCDC59	Q9P031	241 aa	Known RBP	13.57	□□□□□ -0.24
NPC2-208	ENST00000556009	ETV7	Q9Y603	341 aa		13.57	□□□□□ -0.24
NPC2-208	ENST00000556009	C13orf42	A0A1B0GVH6	325 aa		13.56	□□□□□ -0.24
NPC2-208	ENST00000556009	SLC25A17	O43808	307 aa		13.56	□□□□□ -0.24
NPC2-208	ENST00000556009	IGLV2-23	P01705	113 aa		13.56	□□□□□ -0.24
NPC2-208	ENST00000556009	CRYGB	P07316	175 aa		13.56	□□□□□ -0.24
NPC2-208	ENST00000556009	VEGFC	P49767	419 aa		13.56	□□□□□ -0.24
NPC2-208	ENST00000556009	PLAC9	Q5JTB6	97 aa		13.56	□□□□□ -0.24
NPC2-208	ENST00000556009	OR56B1	Q8NGI3	324 aa		13.56	□□□□□ -0.24
NPC2-208	ENST00000556009	OR4A4P	Q8NGN8	299 aa		13.56	□□□□□ -0.24
NPC2-208	ENST00000556009	GRPEL2	Q8TAA5	225 aa		13.56	□□□□□ -0.24
NPC2-208	ENST00000556009	BATF3	Q9NR55	127 aa		13.56	□□□□□ -0.24
NPC2-208	ENST00000556009	SLC35D1	Q9NTN3	355 aa		13.56	□□□□□ -0.24
NPC2-208	ENST00000556009	GAR1	Q9NY12	217 aa	Known RBP	13.56	□□□□□ -0.24
NPC2-208	ENST00000556009	SPATA2	Q9UM82	520 aa		13.56	□□□□□ -0.24
NPC2-208	ENST00000556009		M0R1X1	148 aa		13.55	□□□□□ -0.24
NPC2-208	ENST00000556009	DIRAS3	O95661	229 aa		13.55	□□□□□ -0.24
NPC2-208	ENST00000556009	IGHV4-30-4	P0DP06	118 aa		13.55	□□□□□ -0.24
NPC2-208	ENST00000556009	TAGLN	Q01995	201 aa	Known RBP	13.55	□□□□□ -0.24
NPC2-208	ENST00000556009	SRSF7	Q16629	238 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
NPC2-208	ENST00000556009	OR5T1	Q8NG75	326 aa		13.55	□□□□□ -0.24
NPC2-208	ENST00000556009	ACOT12	Q8WYK0	555 aa		13.55	□□□□□ -0.24
NPC2-208	ENST00000556009	AP3S1	Q92572	193 aa		13.55	□□□□□ -0.24
NPC2-208	ENST00000556009	DCUN1D5	Q9BTE7	237 aa		13.55	□□□□□ -0.24
NPC2-208	ENST00000556009	ZNF355P	Q9NSJ1	428 aa		13.55	□□□□□ -0.24
NPC2-208	ENST00000556009	DNAH1	Q9P2D7	4330 aa		13.55	□□□□□ -0.24
NPC2-208	ENST00000556009	STARD9	Q9P2P6	4700 aa		13.54	□□□□□ -0.24
NPC2-208	ENST00000556009	CNIH1	O95406	144 aa		13.54	□□□□□ -0.24
NPC2-208	ENST00000556009	AADAC	P22760	399 aa		13.54	□□□□□ -0.24
NPC2-208	ENST00000556009	PJVK	Q0ZLH3	352 aa		13.54	□□□□□ -0.24
NPC2-208	ENST00000556009	IL34	Q6ZMJ4	242 aa		13.54	□□□□□ -0.24
NPC2-208	ENST00000556009	SGPP2	Q8IWX5	399 aa		13.54	□□□□□ -0.24
NPC2-208	ENST00000556009	SLC25A38	Q96DW6	304 aa		13.54	□□□□□ -0.24
NPC2-208	ENST00000556009	ATG5	Q9H1Y0	275 aa		13.54	□□□□□ -0.24
NPC2-208	ENST00000556009	RHBDL2	Q9NX52	303 aa		13.54	□□□□□ -0.24
NPC2-208	ENST00000556009	COMMD3	Q9UBI1	195 aa		13.54	□□□□□ -0.24
NPC2-208	ENST00000556009	TRBV6-7	A0A0A0MS04	114 aa		13.53	□□□□□ -0.24
NPC2-208	ENST00000556009	METTL21EP	A6NDL7	271 aa		13.53	□□□□□ -0.24
NPC2-208	ENST00000556009	FABP7	O15540	132 aa		13.53	□□□□□ -0.24

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