RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 TEX45Q8NA69 505 aa12.87□□□□□ -0.35
XRCC3-215ENST00000555964 PECRQ9BY49 303 aa12.87□□□□□ -0.35
XRCC3-215ENST00000555964 HIPK2Q9H2X6 1198 aa12.87□□□□□ -0.35
XRCC3-215ENST00000555964 VCXQ9H320 206 aa12.87□□□□□ -0.35
XRCC3-215ENST00000555964 SDHAF2Q9NX18 166 aa12.87□□□□□ -0.35
XRCC3-215ENST00000555964 RBM7Q9Y580 266 aaKnown RBP12.87□□□□□ -0.35
XRCC3-215ENST00000555964 IGKV1-6A0A0C4DH72 117 aa12.86□□□□□ -0.35
XRCC3-215ENST00000555964 MSGN1A6NI15 193 aa12.86□□□□□ -0.35
XRCC3-215ENST00000555964 FOXI3A8MTJ6 420 aaPredicted RBP12.86□□□□□ -0.35
XRCC3-215ENST00000555964 TRBV12-3P01733 135 aa12.86□□□□□ -0.35
XRCC3-215ENST00000555964 PSMA1P25786 263 aaKnown RBP12.86□□□□□ -0.35
XRCC3-215ENST00000555964 PSMD7P51665 324 aa12.86□□□□□ -0.35
XRCC3-215ENST00000555964 UBE2KP61086 200 aa12.86□□□□□ -0.35
XRCC3-215ENST00000555964 MED22Q15528 200 aa12.86□□□□□ -0.35
XRCC3-215ENST00000555964 LAIR2Q6ISS4 152 aa12.86□□□□□ -0.35
XRCC3-215ENST00000555964 ADAD2Q8NCV1 583 aaKnown RBP12.86□□□□□ -0.35
XRCC3-215ENST00000555964 NEURL2Q9BR09 285 aa12.86□□□□□ -0.35
XRCC3-215ENST00000555964 CABLES2Q9BTV7 478 aa12.86□□□□□ -0.35
XRCC3-215ENST00000555964 PLEKHA3Q9HB20 300 aa12.86□□□□□ -0.35
XRCC3-215ENST00000555964 EBAG9O00559 213 aa12.85□□□□□ -0.35
XRCC3-215ENST00000555964 BET1O15155 118 aa12.85□□□□□ -0.35
XRCC3-215ENST00000555964 SNRPBP14678 240 aaKnown RBP12.85□□□□□ -0.35
XRCC3-215ENST00000555964 MECP2P51608 486 aaKnown RBP12.85□□□□□ -0.35
XRCC3-215ENST00000555964 TMEM50BP56557 158 aa12.85□□□□□ -0.35
XRCC3-215ENST00000555964 RHOGP84095 191 aa12.85□□□□□ -0.35
XRCC3-215ENST00000555964 ATP5G2Q06055 141 aa12.85□□□□□ -0.35
XRCC3-215ENST00000555964 EXOSC2Q13868 293 aaKnown RBP12.85□□□□□ -0.35
XRCC3-215ENST00000555964 TNXAQ16473 311 aa12.85□□□□□ -0.35
XRCC3-215ENST00000555964 PRSS8Q16651 343 aa12.85□□□□□ -0.35
XRCC3-215ENST00000555964 SLC25A42Q86VD7 318 aa12.85□□□□□ -0.35
XRCC3-215ENST00000555964 OSR1Q8TAX0 266 aaPredicted RBP12.85□□□□□ -0.35
XRCC3-215ENST00000555964 SRSF12Q8WXF0 261 aaKnown RBP12.85□□□□□ -0.35
XRCC3-215ENST00000555964 KCTD12Q96CX2 325 aaKnown RBP12.85□□□□□ -0.35
XRCC3-215ENST00000555964 SPIN2AQ99865 258 aa12.85□□□□□ -0.35
XRCC3-215ENST00000555964 SPIN2BQ9BPZ2 258 aa12.85□□□□□ -0.35
XRCC3-215ENST00000555964 GINS4Q9BRT9 223 aa12.85□□□□□ -0.35
XRCC3-215ENST00000555964 SCN3BQ9NY72 215 aa12.85□□□□□ -0.35
XRCC3-215ENST00000555964 EPPK1P58107 5090 aaKnown RBP12.84□□□□□ -0.35
XRCC3-215ENST00000555964 TRBV6-7A0A0A0MS04 114 aa12.84□□□□□ -0.35
XRCC3-215ENST00000555964 IZUMO1RA6ND01 250 aa12.84□□□□□ -0.35
XRCC3-215ENST00000555964 DENRO43583 198 aaKnown RBP12.84□□□□□ -0.35
XRCC3-215ENST00000555964 GADD45AP24522 165 aa12.84□□□□□ -0.35
XRCC3-215ENST00000555964 MAP2K4P45985 399 aa12.84□□□□□ -0.35
XRCC3-215ENST00000555964 DEFA5Q01523 94 aa12.84□□□□□ -0.35
XRCC3-215ENST00000555964 CD300EQ496F6 205 aaPredicted RBP12.84□□□□□ -0.35
XRCC3-215ENST00000555964 LIPKQ5VXJ0 399 aa12.84□□□□□ -0.35
XRCC3-215ENST00000555964 NECAP1Q8NC96 275 aa12.84□□□□□ -0.35
XRCC3-215ENST00000555964 ACOT12Q8WYK0 555 aa12.84□□□□□ -0.35
XRCC3-215ENST00000555964 FAM3DQ96BQ1 224 aa12.84□□□□□ -0.35
XRCC3-215ENST00000555964 TECRQ9NZ01 308 aaKnown RBP12.84□□□□□ -0.35
XRCC3-215ENST00000555964 ADAM30Q9UKF2 790 aa12.84□□□□□ -0.35
XRCC3-215ENST00000555964 LSM2Q9Y333 95 aaKnown RBP12.84□□□□□ -0.35
XRCC3-215ENST00000555964 AK6Q9Y3D8 172 aaKnown RBP12.84□□□□□ -0.35
XRCC3-215ENST00000555964 BIRC6Q9NR09 4857 aa12.84□□□□□ -0.35
XRCC3-215ENST00000555964 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.83□□□□□ -0.36
XRCC3-215ENST00000555964 BMPR1BO00238 502 aa12.83□□□□□ -0.36
XRCC3-215ENST00000555964 CRYZL1O95825 349 aa12.83□□□□□ -0.36
XRCC3-215ENST00000555964 FCGR3AP08637 254 aa12.83□□□□□ -0.36
XRCC3-215ENST00000555964 APELAP0DMC3 54 aa12.83□□□□□ -0.36
XRCC3-215ENST00000555964 PLAC9Q5JTB6 97 aa12.83□□□□□ -0.36
XRCC3-215ENST00000555964 LINC00322Q6ZN03 302 aaPredicted RBP12.83□□□□□ -0.36
XRCC3-215ENST00000555964 RAB3CQ96E17 227 aa12.83□□□□□ -0.36
XRCC3-215ENST00000555964 RETNQ9HD89 108 aa12.83□□□□□ -0.36
XRCC3-215ENST00000555964 AKIP1Q9NQ31 210 aa12.83□□□□□ -0.36
XRCC3-215ENST00000555964 ZNF230Q9UIE0 474 aaPredicted RBP12.83□□□□□ -0.36
XRCC3-215ENST00000555964 RAB22AQ9UL26 194 aa12.83□□□□□ -0.36
XRCC3-215ENST00000555964 SRRM4A7MD48 611 aaKnown RBP12.82□□□□□ -0.36
XRCC3-215ENST00000555964 PTGES3LE9PB15 166 aa12.82□□□□□ -0.36
XRCC3-215ENST00000555964 RCN1Q15293 331 aa12.82□□□□□ -0.36
XRCC3-215ENST00000555964 IGSF11Q5DX21 431 aa12.82□□□□□ -0.36
XRCC3-215ENST00000555964 SLC16A13Q7RTY0 426 aa12.82□□□□□ -0.36
XRCC3-215ENST00000555964 MMD2Q8IY49 270 aa12.82□□□□□ -0.36
XRCC3-215ENST00000555964 TMEM203Q969S6 136 aa12.82□□□□□ -0.36
XRCC3-215ENST00000555964 FAM110AQ9BQ89 295 aa12.82□□□□□ -0.36
XRCC3-215ENST00000555964 SRD5A3Q9H8P0 318 aa12.82□□□□□ -0.36
XRCC3-215ENST00000555964 V9GY05 133 aa12.82□□□□□ -0.36
XRCC3-215ENST00000555964 TRBV9A0A0B4J1U6 114 aa12.81□□□□□ -0.36
XRCC3-215ENST00000555964 OR11H12B2RN74 326 aa12.81□□□□□ -0.36
XRCC3-215ENST00000555964 GSTT2P0CG29 244 aa12.81□□□□□ -0.36
XRCC3-215ENST00000555964 GSTT2BP0CG30 244 aa12.81□□□□□ -0.36
XRCC3-215ENST00000555964 CALRP27797 417 aaKnown RBP12.81□□□□□ -0.36
XRCC3-215ENST00000555964 DUTP33316 252 aaKnown RBP12.81□□□□□ -0.36
XRCC3-215ENST00000555964 TALDO1P37837 337 aa12.81□□□□□ -0.36
XRCC3-215ENST00000555964 CDK10Q15131 360 aa12.81□□□□□ -0.36
XRCC3-215ENST00000555964 SSX1Q16384 188 aa12.81□□□□□ -0.36
XRCC3-215ENST00000555964 GUCA2BQ16661 112 aa12.81□□□□□ -0.36
XRCC3-215ENST00000555964 C2orf76Q3KRA6 126 aa12.81□□□□□ -0.36
XRCC3-215ENST00000555964 DDB2Q92466 427 aa12.81□□□□□ -0.36
XRCC3-215ENST00000555964 GFI1Q99684 422 aa12.81□□□□□ -0.36
XRCC3-215ENST00000555964 ZC4H2Q9NQZ6 224 aa12.81□□□□□ -0.36
XRCC3-215ENST00000555964 ZNF257Q9Y2Q1 563 aa12.81□□□□□ -0.36
XRCC3-215ENST00000555964 MRPS7Q9Y2R9 242 aaKnown RBP12.81□□□□□ -0.36
XRCC3-215ENST00000555964 GGCTO75223 188 aaKnown RBP12.8□□□□□ -0.36
XRCC3-215ENST00000555964 HSMCR30P0CW71 290 aa12.8□□□□□ -0.36
XRCC3-215ENST00000555964 KIR2DS2P43631 304 aa12.8□□□□□ -0.36
XRCC3-215ENST00000555964 CLDN12P56749 244 aa12.8□□□□□ -0.36
XRCC3-215ENST00000555964 DEFB114Q30KQ6 69 aa12.8□□□□□ -0.36
XRCC3-215ENST00000555964 C15orf32Q32M92 178 aa12.8□□□□□ -0.36
XRCC3-215ENST00000555964 OGFRL1Q5TC84 451 aaPredicted RBP12.8□□□□□ -0.36
XRCC3-215ENST00000555964 TMEM91Q6ZNR0 172 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms