RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 POMT1Q9Y6A1 747 aa8.08□□□□□ -1.12
PSEN1-213ENST00000555386 TRBV23-1A0A0A0MS06 115 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 BORCS7-ASMTA0A0B4J1R7 106 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 LOC105371267A0A1B0GV96 52 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 TMEM218A2RU14 115 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 ZNF705EA8MWA4 302 aaPredicted RBP8.07□□□□□ -1.12
PSEN1-213ENST00000555386 CRLF1O75462 422 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 APOC3P02656 99 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 IGHV4-38-2P0DP08 117 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 S100GP29377 79 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 GNRHRP30968 328 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 PJVKQ0ZLH3 352 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 LTC4SQ16873 150 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 SP6Q3SY56 376 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 IGSF11Q5DX21 431 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 C10orf91Q5T1B1 145 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 RUSC1-AS1Q66K80 236 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 RPL7L1Q6DKI1 246 aaKnown RBP8.07□□□□□ -1.12
PSEN1-213ENST00000555386 BRD3OSQ6XYD6 125 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 LYZL2Q7Z4W2 148 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 VMO1Q7Z5L0 202 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 CMTM1Q8IZ96 169 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 SPAG16Q8N0X2 631 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 LY6G5BQ8NDX9 201 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 OR4D5Q8NGN0 318 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 NANPQ8TBE9 248 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 PLPPR1Q8TBJ4 325 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 MRPL30Q8TCC3 161 aaKnown RBP8.07□□□□□ -1.12
PSEN1-213ENST00000555386 COQ2Q96H96 371 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 CABLES2Q9BTV7 478 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 PARP11Q9NR21 331 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 FBXL17Q9UF56 701 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 SOX21Q9Y651 276 aaPredicted RBP8.07□□□□□ -1.12
PSEN1-213ENST00000555386 NF1P21359 2839 aa8.07□□□□□ -1.12
PSEN1-213ENST00000555386 ATG12O94817 140 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 SCGB1D2O95969 90 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 SEC11BP0C7V7 166 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 MMP9P14780 707 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 PVALBP20472 110 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-213ENST00000555386 COX7A1P24310 79 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 LMO1P25800 156 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 UCP1P25874 307 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 BTN1A1Q13410 526 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 GNMTQ14749 295 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 TBC1D26Q86UD7 250 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 FOXRED2Q8IWF2 684 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 SVBPQ8N300 66 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 PNKDQ8N490 385 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 Q8N7P7 452 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 SLC35G3Q8N808 338 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 C8orf46Q8TAG6 207 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 UBALD1Q8TB05 177 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 TP53RKQ96S44 253 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 TBX15Q96SF7 602 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 OR2S2Q9NQN1 319 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 CARHSP1Q9Y2V2 147 aaKnown RBP8.06□□□□□ -1.12
PSEN1-213ENST00000555386 UBE2J1Q9Y385 318 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-213ENST00000555386 TRGV10A0A0A0MS01 117 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 A0A1W2PPH5 198 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 hADV38S2A0JD32 116 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 ODAMA1E959 279 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 H0Y980 276 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 SCTP09683 121 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 EPHA1P21709 976 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 OMGP23515 440 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 RAB5CP51148 216 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 CAV2P51636 162 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 F2RL1P55085 397 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 HLA-DRB3P79483 266 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 HERPUD1Q15011 391 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 KLF17Q5JT82 389 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-213ENST00000555386 PXDC1Q5TGL8 231 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 PRAMEF5Q5TYX0 476 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 TCF23Q7RTU1 214 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 ZNF695Q8IW36 515 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 BCL6BQ8N143 479 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-213ENST00000555386 GAPTQ8N292 157 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 COMMD1Q8N668 190 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 LYPD6BQ8NI32 183 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 MRGPRDQ8TDS7 321 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 NARS2Q96I59 477 aaKnown RBP8.06□□□□□ -1.12
PSEN1-213ENST00000555386 KIRREL1Q96J84 757 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 ZNF714Q96N38 554 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 GINS3Q9BRX5 216 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 NKX6-2Q9C056 277 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-213ENST00000555386 MS4A7Q9GZW8 240 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-213ENST00000555386 SIRPDQ9H106 197 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 SEBOXQ9HB31 216 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-213ENST00000555386 FAM212BQ9NTI7 297 aaPredicted RBP8.06□□□□□ -1.12
PSEN1-213ENST00000555386 TMEM160Q9NX00 188 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 OR2W1Q9Y3N9 320 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 KPTNQ9Y664 436 aa8.06□□□□□ -1.12
PSEN1-213ENST00000555386 IGKV1-6A0A0C4DH72 117 aa8.05□□□□□ -1.12
PSEN1-213ENST00000555386 SLC25A6P12236 298 aa8.05□□□□□ -1.12
PSEN1-213ENST00000555386 VDAC1P21796 283 aa8.05□□□□□ -1.12
PSEN1-213ENST00000555386 NFYBP25208 207 aa8.05□□□□□ -1.12
PSEN1-213ENST00000555386 SRSF2Q01130 221 aaKnown RBP8.05□□□□□ -1.12
PSEN1-213ENST00000555386 DEFA5Q01523 94 aa8.05□□□□□ -1.12
PSEN1-213ENST00000555386 MEF2CQ06413 473 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-213ENST00000555386 BTNL8Q6UX41 500 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms