RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 LFNGQ8NES3 379 aa9.17□□□□□ -0.94
VRK1-204ENST00000555351 MAFIPQ8WZ33 124 aa9.17□□□□□ -0.94
VRK1-204ENST00000555351 RHOVQ96L33 236 aa9.17□□□□□ -0.94
VRK1-204ENST00000555351 HARBI1Q96MB7 349 aa9.17□□□□□ -0.94
VRK1-204ENST00000555351 B9D2Q9BPU9 175 aa9.17□□□□□ -0.94
VRK1-204ENST00000555351 ANXA10Q9UJ72 324 aa9.17□□□□□ -0.94
VRK1-204ENST00000555351 ELF5Q9UKW6 265 aaPredicted RBP9.17□□□□□ -0.94
VRK1-204ENST00000555351 A0A0G2JLM5 398 aa9.16□□□□□ -0.94
VRK1-204ENST00000555351 SMIM30A4D0T7 59 aa9.16□□□□□ -0.94
VRK1-204ENST00000555351 TMEM235A6NFC5 223 aa9.16□□□□□ -0.94
VRK1-204ENST00000555351 LINC01619G3V211 115 aa9.16□□□□□ -0.94
VRK1-204ENST00000555351 CREBL2O60519 120 aaPredicted RBP9.16□□□□□ -0.94
VRK1-204ENST00000555351 TUSC2O75896 110 aa9.16□□□□□ -0.94
VRK1-204ENST00000555351 CNIH1O95406 144 aa9.16□□□□□ -0.94
VRK1-204ENST00000555351 HSPB1P04792 205 aaKnown RBP9.16□□□□□ -0.94
VRK1-204ENST00000555351 SSBP2P81877 361 aaPredicted RBP9.16□□□□□ -0.94
VRK1-204ENST00000555351 DEFB121Q5J5C9 76 aa9.16□□□□□ -0.94
VRK1-204ENST00000555351 OVCH2Q7RTZ1 564 aa9.16□□□□□ -0.94
VRK1-204ENST00000555351 POC5Q8NA72 575 aa9.16□□□□□ -0.94
VRK1-204ENST00000555351 BVESQ8NE79 360 aa9.16□□□□□ -0.94
VRK1-204ENST00000555351 C5orf30Q96GV9 206 aa9.16□□□□□ -0.94
VRK1-204ENST00000555351 CLCC1Q96S66 551 aa9.16□□□□□ -0.94
VRK1-204ENST00000555351 HSD17B10Q99714 261 aaKnown RBP9.16□□□□□ -0.94
VRK1-204ENST00000555351 ST6GALNAC5Q9BVH7 336 aa9.16□□□□□ -0.94
VRK1-204ENST00000555351 VCX3AQ9NNX9 186 aa9.16□□□□□ -0.94
VRK1-204ENST00000555351 DIABLOQ9NR28 239 aa9.16□□□□□ -0.94
VRK1-204ENST00000555351 SPATA2Q9UM82 520 aa9.16□□□□□ -0.94
VRK1-204ENST00000555351 PRELID3BQ9Y3B1 194 aa9.16□□□□□ -0.94
VRK1-204ENST00000555351 A3GALT2U3KPV4 340 aa9.16□□□□□ -0.94
VRK1-204ENST00000555351 A0A087WXM4 84 aa9.15□□□□□ -0.94
VRK1-204ENST00000555351 LOC100506127A0A0U1RQW1 187 aa9.15□□□□□ -0.94
VRK1-204ENST00000555351 SRRM4A7MD48 611 aaKnown RBP9.15□□□□□ -0.94
VRK1-204ENST00000555351 LINC00473A8K010 186 aa9.15□□□□□ -0.94
VRK1-204ENST00000555351 OVOL1O14753 267 aa9.15□□□□□ -0.94
VRK1-204ENST00000555351 SSX5O60225 188 aa9.15□□□□□ -0.94
VRK1-204ENST00000555351 TNFAIP8O95379 198 aa9.15□□□□□ -0.94
VRK1-204ENST00000555351 AADACP22760 399 aa9.15□□□□□ -0.94
VRK1-204ENST00000555351 CBX5P45973 191 aa9.15□□□□□ -0.94
VRK1-204ENST00000555351 TPPP2P59282 170 aa9.15□□□□□ -0.94
VRK1-204ENST00000555351 MXD1Q05195 221 aa9.15□□□□□ -0.94
VRK1-204ENST00000555351 NEDD8Q15843 81 aa9.15□□□□□ -0.94
VRK1-204ENST00000555351 NUDCD2Q8WVJ2 157 aa9.15□□□□□ -0.94
VRK1-204ENST00000555351 SLC25A38Q96DW6 304 aa9.15□□□□□ -0.94
VRK1-204ENST00000555351 FAM103A1Q9BTL3 118 aaKnown RBP9.15□□□□□ -0.94
VRK1-204ENST00000555351 MRPS7Q9Y2R9 242 aaKnown RBP9.15□□□□□ -0.94
VRK1-204ENST00000555351 RBMX2Q9Y388 322 aaKnown RBP9.15□□□□□ -0.94
VRK1-204ENST00000555351 LSM4Q9Y4Z0 139 aaKnown RBP9.15□□□□□ -0.94
VRK1-204ENST00000555351 CRYZL1O95825 349 aa9.14□□□□□ -0.95
VRK1-204ENST00000555351 TRGV3P03979 118 aa9.14□□□□□ -0.95
VRK1-204ENST00000555351 CLEC2LP0C7M8 214 aa9.14□□□□□ -0.95
VRK1-204ENST00000555351 NHLRC4P0CG21 123 aaPredicted RBP9.14□□□□□ -0.95
VRK1-204ENST00000555351 CD69Q07108 199 aa9.14□□□□□ -0.95
VRK1-204ENST00000555351 PJVKQ0ZLH3 352 aa9.14□□□□□ -0.95
VRK1-204ENST00000555351 PRSS8Q16651 343 aa9.14□□□□□ -0.95
VRK1-204ENST00000555351 MRGPRG-AS1Q2M3A8 158 aa9.14□□□□□ -0.95
VRK1-204ENST00000555351 IDNKQ5T6J7 187 aa9.14□□□□□ -0.95
VRK1-204ENST00000555351 ACSM6Q6P461 480 aa9.14□□□□□ -0.95
VRK1-204ENST00000555351 KCTD9Q7L273 389 aa9.14□□□□□ -0.95
VRK1-204ENST00000555351 HOGA1Q86XE5 327 aa9.14□□□□□ -0.95
VRK1-204ENST00000555351 BEST4Q8NFU0 473 aa9.14□□□□□ -0.95
VRK1-204ENST00000555351 GRPEL2Q8TAA5 225 aa9.14□□□□□ -0.95
VRK1-204ENST00000555351 DCUN1D4Q92564 292 aa9.14□□□□□ -0.95
VRK1-204ENST00000555351 OR5B12Q96R08 314 aa9.14□□□□□ -0.95
VRK1-204ENST00000555351 RANGRFQ9HD47 186 aaPredicted RBP9.14□□□□□ -0.95
VRK1-204ENST00000555351 ZNF256Q9Y2P7 627 aaPredicted RBP9.14□□□□□ -0.95
VRK1-204ENST00000555351 TRAV18A0A075B6X5 111 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 IGHV4OR15-8A0A075B7B6 117 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 A0A087WW49 117 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 C13orf42A0A1B0GVH6 325 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 TRIM64CA6NLI5 447 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 IGLV2-14P01704 120 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 ZP3P21754 424 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 NFYAP23511 347 aaPredicted RBP9.13□□□□□ -0.95
VRK1-204ENST00000555351 ECI1P42126 302 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 EIF4EBP1Q13541 118 aaPredicted RBP9.13□□□□□ -0.95
VRK1-204ENST00000555351 CDK10Q15131 360 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 VAX1Q5SQQ9 334 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 ZNF66Q6ZN08 573 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 MMD2Q8IY49 270 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 ZBTB34Q8NCN2 500 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 TSPAN14Q8NG11 270 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 OR5H6Q8NGV6 325 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 VSTM2AQ8TAG5 236 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 DLX4Q92988 240 aaPredicted RBP9.13□□□□□ -0.95
VRK1-204ENST00000555351 USMG5Q96IX5 58 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 MS4A10Q96PG2 267 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 AIFM2Q9BRQ8 373 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 TINAGL1Q9GZM7 467 aaPredicted RBP9.13□□□□□ -0.95
VRK1-204ENST00000555351 RNF167Q9H6Y7 350 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 AUNIPQ9H7T9 357 aa9.13□□□□□ -0.95
VRK1-204ENST00000555351 IGKV1D-13A0A0B4J2D9 117 aa9.12□□□□□ -0.95
VRK1-204ENST00000555351 XRCC3O43542 346 aa9.12□□□□□ -0.95
VRK1-204ENST00000555351 AIREO43918 545 aa9.12□□□□□ -0.95
VRK1-204ENST00000555351 IGKV1-13P0DP09 117 aa9.12□□□□□ -0.95
VRK1-204ENST00000555351 KIR2DS2P43631 304 aa9.12□□□□□ -0.95
VRK1-204ENST00000555351 ARPC4P59998 168 aa9.12□□□□□ -0.95
VRK1-204ENST00000555351 FAM209BQ5JX69 171 aa9.12□□□□□ -0.95
VRK1-204ENST00000555351 OR6Q1Q8NGQ2 317 aa9.12□□□□□ -0.95
VRK1-204ENST00000555351 OR4S2Q8NH73 311 aa9.12□□□□□ -0.95
VRK1-204ENST00000555351 CASTOR1Q8WTX7 329 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms