RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 HNF4GQ14541 408 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 RTL8BQ17RB0 113 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 C11orf88Q6PI97 169 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 TMEM219Q86XT9 240 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 CD300LFQ8TDQ1 290 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 GPHA2Q96T91 129 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 TBC1D24Q9ULP9 559 aa10.11□□□□□ -0.79
SYNE2-219ENST00000555323 LINC00854A0A1B0GVQ3 168 aa10.1□□□□□ -0.79
SYNE2-219ENST00000555323 TSPAN9O75954 239 aa10.1□□□□□ -0.79
SYNE2-219ENST00000555323 NDUFA3O95167 84 aa10.1□□□□□ -0.79
SYNE2-219ENST00000555323 SLC6A1P30531 599 aa10.1□□□□□ -0.79
SYNE2-219ENST00000555323 ASAH1Q13510 395 aa10.1□□□□□ -0.79
SYNE2-219ENST00000555323 RBMS2Q15434 407 aaKnown RBP10.1□□□□□ -0.79
SYNE2-219ENST00000555323 PHLDA2Q53GA4 152 aa10.1□□□□□ -0.79
SYNE2-219ENST00000555323 TBC1D26Q86UD7 250 aa10.1□□□□□ -0.79
SYNE2-219ENST00000555323 Q8N9W7 124 aa10.1□□□□□ -0.79
SYNE2-219ENST00000555323 OSR1Q8TAX0 266 aaPredicted RBP10.1□□□□□ -0.79
SYNE2-219ENST00000555323 TCTEX1D2Q8WW35 142 aa10.1□□□□□ -0.79
SYNE2-219ENST00000555323 RBMXL1Q96E39 390 aaKnown RBP10.1□□□□□ -0.79
SYNE2-219ENST00000555323 TSC22D3Q99576 134 aa10.1□□□□□ -0.79
SYNE2-219ENST00000555323 RANBP3Q9H6Z4 567 aaPredicted RBP10.1□□□□□ -0.79
SYNE2-219ENST00000555323 VSIG4Q9Y279 399 aa10.1□□□□□ -0.79
SYNE2-219ENST00000555323 MOB4Q9Y3A3 225 aa10.1□□□□□ -0.79
SYNE2-219ENST00000555323 JMJD1CQ15652 2540 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 SRRM4A7MD48 611 aaKnown RBP10.09□□□□□ -0.79
SYNE2-219ENST00000555323 NBR2O15453 112 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 FCGR3BO75015 233 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 B3GALNT1O75752 331 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 NDUFB6O95139 128 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 HPRT1P00492 218 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 IGLV2-23P01705 113 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 RLN1P04808 185 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 CRYBA1P05813 215 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 CRYGBP07316 175 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 PI3P19957 117 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 CCR6P51684 374 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 RPS16P62249 146 aaKnown RBP10.09□□□□□ -0.79
SYNE2-219ENST00000555323 RELBQ01201 579 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 ABCA11PQ4W5N1 156 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 ZNF585BQ52M93 769 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 SPAG16Q8N0X2 631 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 CADM3Q8N126 398 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 Q8N2B8 174 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 FAM71E2Q8N5Q1 922 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 C5orf56Q8N8D9 126 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 CCDC71LQ8N9Z2 235 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 POC5Q8NA72 575 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 OR51H1Q8NH63 302 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 OR4S2Q8NH73 311 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 TSNAXQ99598 290 aaKnown RBP10.09□□□□□ -0.79
SYNE2-219ENST00000555323 NPFFR1Q9GZQ6 430 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 PLEKHA2Q9HB19 425 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 COPZ2Q9P299 210 aa10.09□□□□□ -0.79
SYNE2-219ENST00000555323 C14orf166Q9Y224 244 aaKnown RBP10.09□□□□□ -0.79
SYNE2-219ENST00000555323 SETD2Q9BYW2 2564 aaPredicted RBP10.08□□□□□ -0.8
SYNE2-219ENST00000555323 NCBP2LA6PVI3 153 aaKnown RBP10.08□□□□□ -0.8
SYNE2-219ENST00000555323 RRHO14718 337 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 SHOXO15266 292 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 RAMP3O60896 148 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 NDUFA7O95182 113 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 SPDEFO95238 335 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 CRYZL1O95825 349 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 VSIG10L2P0DP72 767 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 HKR1P10072 659 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 CNTFRP26992 372 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 BLCAPP62952 87 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 SRSF2Q01130 221 aaKnown RBP10.08□□□□□ -0.8
SYNE2-219ENST00000555323 DHODHQ02127 395 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 CBX3Q13185 183 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 PSG5Q15238 335 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 MMDQ15546 238 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 POU2AF1Q16633 256 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 TMEM230Q96A57 120 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 GALNT14Q96FL9 552 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 AIFM2Q9BRQ8 373 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 C16orf95Q9H693 158 aa10.08□□□□□ -0.8
SYNE2-219ENST00000555323 LIN7CQ9NUP9 197 aaKnown RBP10.08□□□□□ -0.8
SYNE2-219ENST00000555323 C3orf85A0A1B0GTC6 90 aa10.07□□□□□ -0.8
SYNE2-219ENST00000555323 CRYM-AS1A6NIL9 109 aa10.07□□□□□ -0.8
SYNE2-219ENST00000555323 H0Y980 276 aa10.07□□□□□ -0.8
SYNE2-219ENST00000555323 IL6RP08887 468 aaPredicted RBP10.07□□□□□ -0.8
SYNE2-219ENST00000555323 RPA2P15927 270 aa10.07□□□□□ -0.8
SYNE2-219ENST00000555323 TAS2R31P59538 309 aa10.07□□□□□ -0.8
SYNE2-219ENST00000555323 UBE2KP61086 200 aa10.07□□□□□ -0.8
SYNE2-219ENST00000555323 C5orf64Q2M2E5 130 aa10.07□□□□□ -0.8
SYNE2-219ENST00000555323 KRTAP24-1Q3LI83 254 aa10.07□□□□□ -0.8
SYNE2-219ENST00000555323 TMEM128Q5BJH2 165 aa10.07□□□□□ -0.8
SYNE2-219ENST00000555323 MZT2BQ6NZ67 158 aa10.07□□□□□ -0.8
SYNE2-219ENST00000555323 Q6ZSV7 163 aa10.07□□□□□ -0.8
SYNE2-219ENST00000555323 TEX45Q8NA69 505 aa10.07□□□□□ -0.8
SYNE2-219ENST00000555323 ADAD2Q8NCV1 583 aaKnown RBP10.07□□□□□ -0.8
SYNE2-219ENST00000555323 HARBI1Q96MB7 349 aa10.07□□□□□ -0.8
SYNE2-219ENST00000555323 PRSS22Q9GZN4 317 aa10.07□□□□□ -0.8
SYNE2-219ENST00000555323 ALX4Q9H161 411 aaPredicted RBP10.07□□□□□ -0.8
SYNE2-219ENST00000555323 PALMDQ9NP74 551 aa10.07□□□□□ -0.8
SYNE2-219ENST00000555323 KIAA1456Q9P272 454 aa10.07□□□□□ -0.8
SYNE2-219ENST00000555323 NF1P21359 2839 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 TMEM89A2RUT3 159 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 HRASP01112 189 aa10.06□□□□□ -0.8
SYNE2-219ENST00000555323 HLA-DRB1P01911 266 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms