RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 SP6Q3SY56 376 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 LIN54Q6MZP7 749 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 FAM71F2Q6NXP2 309 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 PRIMA1Q86XR5 153 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 TGIF2LXQ8IUE1 241 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 ODF3L1Q8IXM7 274 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 DRAM1Q8N682 238 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 RTN4IP1Q8WWV3 396 aaPredicted RBP8.79□□□□□ -1
SHMT2-218ENST00000555213 AJUBAQ96IF1 538 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 DUX5Q96PT3 197 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 OR2A7Q96R45 310 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 IFI27L2Q9H2X8 130 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 NAA60Q9H7X0 242 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 RANGRFQ9HD47 186 aaPredicted RBP8.79□□□□□ -1
SHMT2-218ENST00000555213 ESM1Q9NQ30 184 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 SHPKQ9UHJ6 478 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 GAB2Q9UQC2 676 aa8.79□□□□□ -1
SHMT2-218ENST00000555213 C14orf166Q9Y224 244 aaKnown RBP8.79□□□□□ -1
SHMT2-218ENST00000555213 NIPBLQ6KC79 2804 aaeCLIP8.78□□□□□ -1
SHMT2-218ENST00000555213 SAA2-SAA4A0A096LPE2 208 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 TEX13DA0A0J9YY54 714 aaPredicted RBP8.78□□□□□ -1
SHMT2-218ENST00000555213 TIMM23O14925 209 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 SIX6O95475 246 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 HLA-AP01891 365 aaKnown RBP8.78□□□□□ -1
SHMT2-218ENST00000555213 CRYBA1P05813 215 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 FAM106CPP0CH98 169 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 SAA2P0DJI9 122 aaPredicted RBP8.78□□□□□ -1
SHMT2-218ENST00000555213 REG1BP48304 166 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 H2BFSP57053 126 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 LINC00205P59089 165 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 RPL15P61313 204 aaKnown RBP8.78□□□□□ -1
SHMT2-218ENST00000555213 RPL30P62888 115 aaKnown RBP8.78□□□□□ -1
SHMT2-218ENST00000555213 CD83Q01151 205 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 SRSF4Q08170 494 aaKnown RBP8.78□□□□□ -1
SHMT2-218ENST00000555213 Q5BKY6 102 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 LDLRAD2Q5SZI1 272 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 KCTD9Q7L273 389 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 MOB3BQ86TA1 216 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 TBC1D26Q86UD7 250 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 DYNAPQ8N1N2 210 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.78□□□□□ -1
SHMT2-218ENST00000555213 LHFPL5Q8TAF8 219 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 ABHD14BQ96IU4 210 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 AKR1E2Q96JD6 320 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 TP53RKQ96S44 253 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 ZNF251Q9BRH9 671 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 CHIAQ9BZP6 476 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 TCF19Q9Y242 345 aa8.78□□□□□ -1
SHMT2-218ENST00000555213 IGHV1-3A0A0C4DH29 117 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 A0A1W2PPI3 338 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 BOLA2-SMG1P6H3BVE0 249 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 SSNA1O43805 119 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 OR5AC1P0C628 307 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 VAMP1P23763 118 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 PAX6P26367 422 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 IL15RAQ13261 267 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 HES1Q14469 280 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 MSMO1Q15800 293 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 LY6EQ16553 131 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 ZNF585BQ52M93 769 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 DHRS7BQ6IAN0 325 aaPredicted RBP8.77□□□□□ -1.01
SHMT2-218ENST00000555213 ZNF833PQ6ZTB9 187 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 AKAP14Q86UN6 197 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 SGPP2Q8IWX5 399 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 ZNF645Q8N7E2 425 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 LRTM2Q8N967 370 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 CASTOR1Q8WTX7 329 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 TMEM158Q8WZ71 300 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 ST6GALNAC6Q969X2 333 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 PPP1R14BQ96C90 147 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 ZNF436Q9C0F3 470 aaPredicted RBP8.77□□□□□ -1.01
SHMT2-218ENST00000555213 OR2D2Q9H210 308 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 SDHAF2Q9NX18 166 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 MGAT4CQ9UBM8 478 aa8.77□□□□□ -1.01
SHMT2-218ENST00000555213 C3orf85A0A1B0GTC6 90 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 MPTX1A8MV57 137 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 SMLR1H3BR10 107 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 TNFSF12O43508 249 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 GPR137BO60478 399 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 ADAP1O75689 374 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 SLC22A5O76082 557 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 CDS2O95674 445 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 IGKV1-39P01597 117 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 IGKV1D-39P04432 117 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 F2RP25116 425 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 ABCA11PQ4W5N1 156 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 C16orf82Q7Z2V1 217 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 SELENOHQ8IZQ5 122 aaKnown RBP8.76□□□□□ -1.01
SHMT2-218ENST00000555213 TCTE3Q8IZS6 198 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 UXS1Q8NBZ7 420 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 ZBTB34Q8NCN2 500 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 TMEM56Q96MV1 263 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 MRPL20Q9BYC9 149 aaKnown RBP8.76□□□□□ -1.01
SHMT2-218ENST00000555213 NPFFR1Q9GZQ6 430 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 TMEM222Q9H0R3 208 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 TMEM56-RWDD3S4R434 201 aa8.76□□□□□ -1.01
SHMT2-218ENST00000555213 MXRA5Q9NR99 2828 aa8.75□□□□□ -1.01
SHMT2-218ENST00000555213 FAM181BA6NEQ2 426 aa8.75□□□□□ -1.01
SHMT2-218ENST00000555213 LINC00473A8K010 186 aa8.75□□□□□ -1.01
SHMT2-218ENST00000555213 RNF212BA8MTL3 300 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms