RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ZNF833PQ6ZTB9 187 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 C5orf24Q7Z6I8 188 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 CENPVQ7Z7K6 275 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-211ENST00000554310 ODF3L1Q8IXM7 274 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 BEST4Q8NFU0 473 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 OR4F17Q8NGA8 305 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 HYLS1Q96M11 299 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 OR4F4Q96R69 305 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 Q9N2K0 584 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 IFT46Q9NQC8 304 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 SCP2D1Q9UJQ7 156 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 ELF5Q9UKW6 265 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-211ENST00000554310 NOTCH3Q9UM47 2321 aa10.36□□□□□ -0.75
SHMT2-211ENST00000554310 NCBP2LA6PVI3 153 aaKnown RBP10.35□□□□□ -0.75
SHMT2-211ENST00000554310 ADARB2-AS1A8MUL3 147 aa10.35□□□□□ -0.75
SHMT2-211ENST00000554310 ITGB1BP1O14713 200 aa10.35□□□□□ -0.75
SHMT2-211ENST00000554310 RGS13O14921 159 aa10.35□□□□□ -0.75
SHMT2-211ENST00000554310 CREBL2O60519 120 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-211ENST00000554310 IGHG2P01859 326 aa10.35□□□□□ -0.75
SHMT2-211ENST00000554310 ANXA7P20073 488 aaKnown RBP10.35□□□□□ -0.75
SHMT2-211ENST00000554310 ZBTB25P24278 435 aa10.35□□□□□ -0.75
SHMT2-211ENST00000554310 IFITM2Q01629 132 aa10.35□□□□□ -0.75
SHMT2-211ENST00000554310 NSUN5P1Q3KNT7 163 aa10.35□□□□□ -0.75
SHMT2-211ENST00000554310 ACTBL2Q562R1 376 aa10.35□□□□□ -0.75
SHMT2-211ENST00000554310 RNASE10Q5GAN6 216 aaKnown RBP10.35□□□□□ -0.75
SHMT2-211ENST00000554310 HIST2H2BDQ6DRA6 164 aa10.35□□□□□ -0.75
SHMT2-211ENST00000554310 ZFAND1Q8TCF1 268 aa10.35□□□□□ -0.75
SHMT2-211ENST00000554310 NUDCD2Q8WVJ2 157 aa10.35□□□□□ -0.75
SHMT2-211ENST00000554310 EDARADDQ8WWZ3 215 aa10.35□□□□□ -0.75
SHMT2-211ENST00000554310 PRRT1Q99946 306 aa10.35□□□□□ -0.75
SHMT2-211ENST00000554310 SEC22CQ9BRL7 303 aa10.35□□□□□ -0.75
SHMT2-211ENST00000554310 MRPL20Q9BYC9 149 aaKnown RBP10.35□□□□□ -0.75
SHMT2-211ENST00000554310 TINAGL1Q9GZM7 467 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-211ENST00000554310 PIPOXQ9P0Z9 390 aa10.35□□□□□ -0.75
SHMT2-211ENST00000554310 SLC23A1Q9UHI7 598 aa10.35□□□□□ -0.75
SHMT2-211ENST00000554310 PSMB11A5LHX3 300 aa10.34□□□□□ -0.75
SHMT2-211ENST00000554310 SERPINE3A8MV23 424 aa10.34□□□□□ -0.75
SHMT2-211ENST00000554310 M0QYG6 137 aa10.34□□□□□ -0.75
SHMT2-211ENST00000554310 RAB29O14966 203 aa10.34□□□□□ -0.75
SHMT2-211ENST00000554310 ST8SIA5O15466 376 aa10.34□□□□□ -0.75
SHMT2-211ENST00000554310 HSPA12AO43301 675 aa10.34□□□□□ -0.75
SHMT2-211ENST00000554310 KCNAB3O43448 404 aa10.34□□□□□ -0.75
SHMT2-211ENST00000554310 CXCL3P19876 107 aa10.34□□□□□ -0.75
SHMT2-211ENST00000554310 KIR2DS1Q14954 304 aa10.34□□□□□ -0.75
SHMT2-211ENST00000554310 IDO2Q6ZQW0 420 aa10.34□□□□□ -0.75
SHMT2-211ENST00000554310 SLC35E3Q7Z769 313 aa10.34□□□□□ -0.75
SHMT2-211ENST00000554310 FOXRED2Q8IWF2 684 aa10.34□□□□□ -0.75
SHMT2-211ENST00000554310 Q8N9W7 124 aa10.34□□□□□ -0.75
SHMT2-211ENST00000554310 S1PR3Q99500 378 aa10.34□□□□□ -0.75
SHMT2-211ENST00000554310 ZNF436Q9C0F3 470 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-211ENST00000554310 KCNK7Q9Y2U2 307 aa10.34□□□□□ -0.75
SHMT2-211ENST00000554310 TRDCB7Z8K6 153 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 AP4M1O00189 453 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 FABP7O15540 132 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 DIRAS3O95661 229 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 RLN1P04808 185 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 FCGR3AP08637 254 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 SCTP09683 121 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 GPR12P47775 334 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 OR3A3P47888 321 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 TCTEX1D4Q5JR98 221 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 VAX1Q5SQQ9 334 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 FAM71E2Q8N5Q1 922 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 OR4A4PQ8NGN8 299 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 R3HDM4Q96D70 268 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 RASL11BQ9BPW5 248 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 NABP2Q9BQ15 211 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 PARP12Q9H0J9 701 aaKnown RBP10.33□□□□□ -0.76
SHMT2-211ENST00000554310 SLA2Q9H6Q3 261 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 PLSCR3Q9NRY6 295 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 OR1A1Q9P1Q5 309 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 TSSC4Q9Y5U2 329 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-211ENST00000554310 PLXNB1O43157 2135 aa10.33□□□□□ -0.76
SHMT2-211ENST00000554310 TCRBV4S1A1TA0A5B7 111 aa10.32□□□□□ -0.76
SHMT2-211ENST00000554310 OR5H14A6NHG9 310 aa10.32□□□□□ -0.76
SHMT2-211ENST00000554310 FCER2P06734 321 aa10.32□□□□□ -0.76
SHMT2-211ENST00000554310 CEACAM6P40199 344 aa10.32□□□□□ -0.76
SHMT2-211ENST00000554310 SLC35B1P78383 322 aa10.32□□□□□ -0.76
SHMT2-211ENST00000554310 ARFRP1Q13795 201 aa10.32□□□□□ -0.76
SHMT2-211ENST00000554310 MMDQ15546 238 aa10.32□□□□□ -0.76
SHMT2-211ENST00000554310 HOGA1Q86XE5 327 aa10.32□□□□□ -0.76
SHMT2-211ENST00000554310 COMMD1Q8N668 190 aa10.32□□□□□ -0.76
SHMT2-211ENST00000554310 GVQW1Q8N7I0 195 aa10.32□□□□□ -0.76
SHMT2-211ENST00000554310 OR13C8Q8NGS7 320 aa10.32□□□□□ -0.76
SHMT2-211ENST00000554310 ZNF251Q9BRH9 671 aa10.32□□□□□ -0.76
SHMT2-211ENST00000554310 AGMATQ9BSE5 352 aa10.32□□□□□ -0.76
SHMT2-211ENST00000554310 CABLES2Q9BTV7 478 aa10.32□□□□□ -0.76
SHMT2-211ENST00000554310 IGKV1-6A0A0C4DH72 117 aa10.31□□□□□ -0.76
SHMT2-211ENST00000554310 A0A1W2PRX2 142 aa10.31□□□□□ -0.76
SHMT2-211ENST00000554310 OR2A4O95047 310 aa10.31□□□□□ -0.76
SHMT2-211ENST00000554310 GIPP09681 153 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-211ENST00000554310 PF4V1P10720 104 aa10.31□□□□□ -0.76
SHMT2-211ENST00000554310 HRH1P35367 487 aa10.31□□□□□ -0.76
SHMT2-211ENST00000554310 RPL39P5Q59GN2 51 aa10.31□□□□□ -0.76
SHMT2-211ENST00000554310 KHDC1LQ5JSQ8 128 aa10.31□□□□□ -0.76
SHMT2-211ENST00000554310 C10orf99Q6UWK7 81 aa10.31□□□□□ -0.76
SHMT2-211ENST00000554310 Q6ZS49 121 aa10.31□□□□□ -0.76
SHMT2-211ENST00000554310 STPG2Q8N412 459 aa10.31□□□□□ -0.76
SHMT2-211ENST00000554310 ARRDC1Q8N5I2 433 aa10.31□□□□□ -0.76
SHMT2-211ENST00000554310 ZNF431Q8TF32 576 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms