RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 C9orf152Q5JTZ5 239 aa7.07□□□□□ -1.28
TDP1-208ENST00000553989 TMEM42Q69YG0 159 aa7.07□□□□□ -1.28
TDP1-208ENST00000553989 SLC25A26Q70HW3 274 aa7.07□□□□□ -1.28
TDP1-208ENST00000553989 OR51T1Q8NGJ9 327 aa7.07□□□□□ -1.28
TDP1-208ENST00000553989 OR13C9Q8NGT0 318 aa7.07□□□□□ -1.28
TDP1-208ENST00000553989 WIPF2Q8TF74 440 aaPredicted RBP7.07□□□□□ -1.28
TDP1-208ENST00000553989 RNF141Q8WVD5 230 aa7.07□□□□□ -1.28
TDP1-208ENST00000553989 SAT2Q96F10 170 aaPredicted RBP7.07□□□□□ -1.28
TDP1-208ENST00000553989 BORCS8Q96FH0 119 aa7.07□□□□□ -1.28
TDP1-208ENST00000553989 RCC1LQ96I51 464 aaKnown RBP7.07□□□□□ -1.28
TDP1-208ENST00000553989 SEC22AQ96IW7 307 aa7.07□□□□□ -1.28
TDP1-208ENST00000553989 SNX22Q96L94 193 aa7.07□□□□□ -1.28
TDP1-208ENST00000553989 C2orf50Q96LR7 162 aa7.07□□□□□ -1.28
TDP1-208ENST00000553989 SLC25A33Q9BSK2 321 aa7.07□□□□□ -1.28
TDP1-208ENST00000553989 ZNF471Q9BX82 626 aaPredicted RBP7.07□□□□□ -1.28
TDP1-208ENST00000553989 TMEM59Q9BXS4 323 aa7.07□□□□□ -1.28
TDP1-208ENST00000553989 TMEM133Q9H2Q1 129 aa7.07□□□□□ -1.28
TDP1-208ENST00000553989 CHMP1AQ9HD42 196 aaPredicted RBP7.07□□□□□ -1.28
TDP1-208ENST00000553989 LINC00312Q9Y6C7 94 aa7.07□□□□□ -1.28
TDP1-208ENST00000553989 C13orf42A0A1B0GVH6 325 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 FAM25EA8MYX2 175 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 FGF16O43320 207 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 SSX5O60225 188 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 CRTAPO75718 401 aaPredicted RBP7.06□□□□□ -1.28
TDP1-208ENST00000553989 SPDEFO95238 335 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 PMP2P02689 132 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 DUSP1P28562 367 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 HOXD3P31249 432 aaPredicted RBP7.06□□□□□ -1.28
TDP1-208ENST00000553989 ERVK11-1P61568 191 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 BTN1A1Q13410 526 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 PRSS54Q6PEW0 395 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 KCTD9Q7L273 389 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 TCF23Q7RTU1 214 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 C16orf82Q7Z2V1 217 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 BAP18Q8IXM2 172 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 Q8IYB0 196 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 SLC38A6Q8IZM9 456 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 WFDC9Q8NEX5 89 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 ZNF596Q8TC21 504 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 PCNPQ8WW12 178 aaKnown RBP7.06□□□□□ -1.28
TDP1-208ENST00000553989 CXorf58Q96LI9 332 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 LINC00052Q96N35 136 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 TM2D1Q9BX74 207 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 GAL3ST2Q9H3Q3 398 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 KCNK15Q9H427 330 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 MTCH1Q9NZJ7 389 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 KCNIP3Q9Y2W7 256 aa7.06□□□□□ -1.28
TDP1-208ENST00000553989 TRGV10A0A0A0MS01 117 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 WI2-2373I1.2A0A1W2PRP0 233 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 SH2D7A6NKC9 451 aaPredicted RBP7.05□□□□□ -1.28
TDP1-208ENST00000553989 SIRPB1O00241 398 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 MFNGO00587 321 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 TOR1AO14656 332 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 MGST3O14880 152 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 IFNA21P01568 189 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 CSN2P05814 226 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 PRKACAP17612 351 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 BLVRBP30043 206 aaPredicted RBP7.05□□□□□ -1.28
TDP1-208ENST00000553989 FUT6P51993 359 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 ATP1B3P54709 279 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 TMEM50BP56557 158 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 BLOC1S1P78537 153 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 RBM39Q14498 530 aaKnown RBP7.05□□□□□ -1.28
TDP1-208ENST00000553989 KISS1Q15726 138 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 UBE2V2Q15819 145 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 SMUG1Q53HV7 270 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 NKAPLQ5M9Q1 402 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 PRAMEF5Q5TYX0 476 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 ELP2Q6IA86 826 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 OR52W1Q6IF63 320 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 LHFPL1Q86WI0 220 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 ABHD12Q8N2K0 398 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 GVQW1Q8N7I0 195 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 OR5AP2Q8NGF4 316 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 OR4P4Q8NGL7 312 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 MARCH1Q8TCQ1 289 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 CASTOR1Q8WTX7 329 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 NUDCD2Q8WVJ2 157 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 SPSB1Q96BD6 273 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 MRPS24Q96EL2 167 aaKnown RBP7.05□□□□□ -1.28
TDP1-208ENST00000553989 RNF126Q9BV68 326 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 GPR61Q9BZJ8 451 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 CHST5Q9GZS9 411 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 METTL9Q9H1A3 318 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 DPM3Q9P2X0 92 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 IL36RNQ9UBH0 155 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 ZNF230Q9UIE0 474 aaPredicted RBP7.05□□□□□ -1.28
TDP1-208ENST00000553989 HSF4Q9ULV5 492 aa7.05□□□□□ -1.28
TDP1-208ENST00000553989 C14orf166Q9Y224 244 aaKnown RBP7.05□□□□□ -1.28
TDP1-208ENST00000553989 IGKV1-27A0A075B6S5 117 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 FAM90A22PA8MWA6 464 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 TSPAN4O14817 238 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 SOCS1O15524 211 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 PSPNO60542 156 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 SCO1O75880 301 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 MMP23AO75900 390 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 CTSDP07339 412 aaPredicted RBP7.04□□□□□ -1.28
TDP1-208ENST00000553989 BCL3P20749 454 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 CEACAM3P40198 252 aa7.04□□□□□ -1.28
TDP1-208ENST00000553989 LUMP51884 338 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms