RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 ABHD5Q8WTS1 349 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 GPR61Q9BZJ8 451 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 GNG12Q9UBI6 72 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 GVINP1Q7Z2Y8 2422 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 SPINT2O43291 252 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 FCGR3BO75015 233 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 SOD3P08294 240 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 S100A2P29034 98 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 PRDX2P32119 198 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 CLEC12BQ2HXU8 276 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 ACSF3Q4G176 576 aaPredicted RBP12.13□□□□□ -0.47
ACTN1-211ENST00000553882 DEFB124Q8NES8 71 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 OR4F5Q8NH21 305 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 PRR7Q8TB68 274 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 RAB24Q969Q5 203 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 OR4F4Q96R69 305 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 GAR1Q9NY12 217 aaKnown RBP12.13□□□□□ -0.47
ACTN1-211ENST00000553882 TIMM9Q9Y5J7 89 aa12.13□□□□□ -0.47
ACTN1-211ENST00000553882 TRBV23-1A0A0A0MS06 115 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 CTXND1A0A1B0GTU2 59 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 PROP1O75360 226 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 KITLGP21583 273 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 PSMB3P49720 205 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 RTP5Q14D33 572 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 MSMPQ1L6U9 139 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 GCSAMLQ5JQS6 135 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 ZNF709Q8N972 641 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 EDARADDQ8WWZ3 215 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 C15orf65H3BRN8 121 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 RAB29O14966 203 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 OR9G9P0C7N8 305 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 TUBG1P23258 451 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 GPR12P47775 334 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 RND2P52198 227 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 SPRNQ5BIV9 151 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 ZNRF1Q8ND25 227 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 OR10D4PQ8NGN7 298 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 R3HDM4Q96D70 268 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 TAAR6Q96RI8 345 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 TMEM242Q9NWH2 141 aa12.12□□□□□ -0.47
ACTN1-211ENST00000553882 ROS1P08922 2347 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 PRR33A8MZF0 331 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 AQP7O14520 342 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 PPP1R2P9O14990 202 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 TMEM241Q24JQ0 296 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 CENPVQ7Z7K6 275 aaPredicted RBP12.11□□□□□ -0.47
ACTN1-211ENST00000553882 SARAFQ96BY9 339 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 SNX22Q96L94 193 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 LURAP1Q96LR2 239 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 RBM14Q96PK6 669 aaKnown RBP12.11□□□□□ -0.47
ACTN1-211ENST00000553882 HSD17B10Q99714 261 aaKnown RBP12.11□□□□□ -0.47
ACTN1-211ENST00000553882 PARLQ9H300 379 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 NAT8Q9UHE5 227 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 PTPRBP23467 1997 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 IGKV1D-17A0A075B6S4 117 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 SMCO3A2RU48 225 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 IFNL4K9M1U5 179 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 PAGE4O60829 102 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 TNFSF13O75888 250 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 S100PP25815 95 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 EDDM3BP56851 147 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 ATP6V1FQ16864 119 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 RPL39P5Q59GN2 51 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 VHLLQ6RSH7 139 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 ZNF66Q6ZN08 573 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 C16orf82Q7Z2V1 217 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 OR5T1Q8NG75 326 aa12.11□□□□□ -0.47
ACTN1-211ENST00000553882 CIB3Q96Q77 187 aaPredicted RBP12.11□□□□□ -0.47
ACTN1-211ENST00000553882 TRAV17A0A0B4J275 112 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 C15orf62A8K5M9 175 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 KBTBD11O94819 623 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 ZNF83P51522 516 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 UTF1Q5T230 341 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 CYP2G1PQ6ZSU1 146 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 C1orf162Q8NEQ5 155 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-211ENST00000553882 LEAP2Q969E1 77 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 DKK4Q9UBT3 224 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 KALRNO60229 2985 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 TRAV38-1A0A0B4J264 116 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 M0R1X1 148 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 IGLV1-44P01699 117 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 OPN1MWP04001 364 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 OPN1MW2P0DN77 364 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 OPN1MW3P0DN78 364 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 DUTP33316 252 aaKnown RBP12.1□□□□□ -0.47
ACTN1-211ENST00000553882 DEFB109BQ30KR1 87 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 STARD4Q96DR4 205 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 ACTR3CQ9C0K3 210 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-211ENST00000553882 ZNF71Q9NQZ8 489 aaPredicted RBP12.1□□□□□ -0.47
ACTN1-211ENST00000553882 PLSCR4Q9NRQ2 329 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 WASF3Q9UPY6 502 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 LAMP3Q9UQV4 416 aa12.1□□□□□ -0.47
ACTN1-211ENST00000553882 RIF1Q5UIP0 2472 aaKnown RBP12.1□□□□□ -0.47
ACTN1-211ENST00000553882 IGHV2-70P01814 119 aa12.09□□□□□ -0.47
ACTN1-211ENST00000553882 FTH1P19P0C7X4 201 aa12.09□□□□□ -0.47
ACTN1-211ENST00000553882 RPL23P62829 140 aaKnown RBP12.09□□□□□ -0.47
ACTN1-211ENST00000553882 BSXQ3C1V8 233 aa12.09□□□□□ -0.47
ACTN1-211ENST00000553882 FAM201AQ5SY85 155 aa12.09□□□□□ -0.47
ACTN1-211ENST00000553882 PRAMEF5Q5TYX0 476 aa12.09□□□□□ -0.47
ACTN1-211ENST00000553882 OR13D1Q8NGV5 346 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms