RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 OR2H1Q9GZK4 316 aa2.66□□□□□ -1.98
TDP1-207ENST00000553617 SLIRPQ9GZT3 109 aaKnown RBP2.66□□□□□ -1.98
TDP1-207ENST00000553617 CHST6Q9GZX3 395 aa2.66□□□□□ -1.98
TDP1-207ENST00000553617 PBOV1Q9GZY1 135 aa2.66□□□□□ -1.98
TDP1-207ENST00000553617 TAF9BQ9HBM6 251 aa2.66□□□□□ -1.98
TDP1-207ENST00000553617 NOX3Q9HBY0 568 aa2.66□□□□□ -1.98
TDP1-207ENST00000553617 ZNF226Q9NYT6 803 aa2.66□□□□□ -1.98
TDP1-207ENST00000553617 TBX21Q9UL17 535 aa2.66□□□□□ -1.98
TDP1-207ENST00000553617 HIGD1AQ9Y241 93 aa2.66□□□□□ -1.98
TDP1-207ENST00000553617 HEBP2Q9Y5Z4 205 aa2.66□□□□□ -1.98
TDP1-207ENST00000553617 NPHP4O75161 1426 aaPredicted RBP2.66□□□□□ -1.98
TDP1-207ENST00000553617 WNK3Q9BYP7 1800 aa2.65□□□□□ -1.98
TDP1-207ENST00000553617 ABCC12Q96J65 1359 aa2.65□□□□□ -1.98
TDP1-207ENST00000553617 IGLV3-10A0A075B6K4 115 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 TRAV8-6A0A0B4J262 113 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 TRAV38-1A0A0B4J264 116 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 DUXBA0A1W2PPF3 345 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 RIIAD1A6NNX1 92 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 H3BP45 60 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 NDUFS5O43920 106 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 KCNK2O95069 426 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 OR2H2O95918 312 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 INSP01308 110 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 IGLV1-47P01700 117 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 IGHG2P01859 326 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 IGHMP01871 453 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 FABP3P05413 133 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 IGHV4-34P06331 123 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 CTLA4P16410 223 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 LHX2P50458 406 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 NDUFA8P51970 172 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 ZNF138P52744 262 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 CRISP3P54108 245 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 SNRPD2P62316 118 aaKnown RBP2.65□□□□□ -1.99
TDP1-207ENST00000553617 RPS24P62847 133 aaKnown RBP2.65□□□□□ -1.99
TDP1-207ENST00000553617 RPS25P62851 125 aaKnown RBP2.65□□□□□ -1.99
TDP1-207ENST00000553617 HLA-DRB3P79483 266 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 PSG9Q00887 426 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 PAFAH1B3Q15102 231 aaKnown RBP2.65□□□□□ -1.99
TDP1-207ENST00000553617 CCL15Q16663 113 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 SCGB2B2Q4G0G5 96 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 CENPWQ5EE01 88 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 COL5A1-AS1Q5SY13 56 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 LDLRAD2Q5SZI1 272 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 TSPO2Q5TGU0 170 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 ZNF493Q6ZR52 646 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 CAMK2N1Q7Z7J9 78 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 H1FOOQ8IZA3 346 aaPredicted RBP2.65□□□□□ -1.99
TDP1-207ENST00000553617 TCTE3Q8IZS6 198 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 ZCCHC24Q8N2G6 241 aaKnown RBP2.65□□□□□ -1.99
TDP1-207ENST00000553617 EXOC3-AS1Q8N2X6 119 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 DEFB125Q8N687 156 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 ANKRD29Q8N6D5 301 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 NPWQ8N729 165 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 ZNF433Q8N7K0 673 aaPredicted RBP2.65□□□□□ -1.99
TDP1-207ENST00000553617 DCAF4L2Q8NA75 395 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 OR8S1Q8NH09 359 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 ZNF420Q8TAQ5 688 aaPredicted RBP2.65□□□□□ -1.99
TDP1-207ENST00000553617 GPR146Q96CH1 333 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 SLC25A44Q96H78 314 aaPredicted RBP2.65□□□□□ -1.99
TDP1-207ENST00000553617 SPACA5Q96QH8 159 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 TRIB3Q96RU7 358 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 TMEM147Q9BVK8 224 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 SNHG12Q9BXW3 62 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 NKX6-2Q9C056 277 aaPredicted RBP2.65□□□□□ -1.99
TDP1-207ENST00000553617 SLC25A31Q9H0C2 315 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 IFI27L2Q9H2X8 130 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 LHX9Q9NQ69 397 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 RBFOX1Q9NWB1 397 aaKnown RBP2.65□□□□□ -1.99
TDP1-207ENST00000553617 METTL1Q9UBP6 276 aaKnown RBP2.65□□□□□ -1.99
TDP1-207ENST00000553617 MTFP1Q9UDX5 166 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 SNX12Q9UMY4 172 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 HS3ST2Q9Y278 367 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 PDS5BQ9NTI5 1447 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 XIRP1Q702N8 1843 aaKnown RBP2.65□□□□□ -1.99
TDP1-207ENST00000553617 NFASCO94856 1347 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 COL2A1P02458 1487 aaPredicted RBP2.65□□□□□ -1.99
TDP1-207ENST00000553617 ABCC10Q5T3U5 1492 aa2.65□□□□□ -1.99
TDP1-207ENST00000553617 MEGF6O75095 1541 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 MYH11P35749 1972 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 TRAV30A0A087WSZ9 112 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 LOC102724200A0A096LPH7 203 aaPredicted RBP2.64□□□□□ -1.99
TDP1-207ENST00000553617 LOC102725191A0A1B0GVB3 256 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 A0A1B0GW64 132 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 KNCNA6PVL3 124 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 H0Y9J4 135 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 H3BQF6 201 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 I3L521 148 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 MYL12BO14950 172 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 RBFOX2O43251 390 aaKnown RBP eCLIP2.64□□□□□ -1.99
TDP1-207ENST00000553617 SOD3P08294 240 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 SCTP09683 121 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 SMIM17P0DL12 118 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 ERGP11308 486 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 NTF3P20783 257 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 PSMB2P49721 201 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 TAF6P49848 677 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 CCL23P55773 120 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 CTBP2P56545 445 aa2.64□□□□□ -1.99
TDP1-207ENST00000553617 DEFA3P59666 94 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms