RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 KLK15Q9H2R5 256 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 ZNF230Q9UIE0 474 aaPredicted RBP9.13□□□□□ -0.95
SRP54-203ENST00000553544 ELF5Q9UKW6 265 aaPredicted RBP9.13□□□□□ -0.95
SRP54-203ENST00000553544 VSIG4Q9Y279 399 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 FBXO7Q9Y3I1 522 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 WSB1Q9Y6I7 421 aa9.13□□□□□ -0.95
SRP54-203ENST00000553544 TRAV41A0A0B4J266 112 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 H7C2Y5 167 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 I3L521 148 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 OVOL1O14753 267 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 BET1O15155 118 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 IGKV1-16P04430 117 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 TFAP2AP05549 437 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 CTXN2P0C2S0 81 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 OR8U9P0C7N5 309 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 EGR2P11161 476 aaPredicted RBP9.12□□□□□ -0.95
SRP54-203ENST00000553544 SNRPBP14678 240 aaKnown RBP9.12□□□□□ -0.95
SRP54-203ENST00000553544 RPL5P46777 297 aaKnown RBP9.12□□□□□ -0.95
SRP54-203ENST00000553544 RORCP51449 518 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 LSM3P62310 102 aaKnown RBP9.12□□□□□ -0.95
SRP54-203ENST00000553544 CX3CL1P78423 397 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 RUNX1Q01196 453 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 PSG5Q15238 335 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 CDNFQ49AH0 187 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 HACD4Q5VWC8 232 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 PDPNQ86YL7 162 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 ZNF491Q8N8L2 437 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 OR10J5Q8NHC4 309 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 DCUN1D4Q92564 292 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 C5orf30Q96GV9 206 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 RNF167Q9H6Y7 350 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 PARP11Q9NR21 331 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 NUBP2Q9Y5Y2 271 aa9.12□□□□□ -0.95
SRP54-203ENST00000553544 SMIM31A0A1B0GVY4 71 aa9.11□□□□□ -0.95
SRP54-203ENST00000553544 SOX15O60248 233 aa9.11□□□□□ -0.95
SRP54-203ENST00000553544 SPDEFO95238 335 aa9.11□□□□□ -0.95
SRP54-203ENST00000553544 CLEC2LP0C7M8 214 aa9.11□□□□□ -0.95
SRP54-203ENST00000553544 CBX5P45973 191 aa9.11□□□□□ -0.95
SRP54-203ENST00000553544 RAB9AP51151 201 aa9.11□□□□□ -0.95
SRP54-203ENST00000553544 ZNF562Q6V9R5 426 aa9.11□□□□□ -0.95
SRP54-203ENST00000553544 H1FOOQ8IZA3 346 aaPredicted RBP9.11□□□□□ -0.95
SRP54-203ENST00000553544 OR6Q1Q8NGQ2 317 aa9.11□□□□□ -0.95
SRP54-203ENST00000553544 GINS4Q9BRT9 223 aa9.11□□□□□ -0.95
SRP54-203ENST00000553544 OR2D2Q9H210 308 aa9.11□□□□□ -0.95
SRP54-203ENST00000553544 SDHAF2Q9NX18 166 aa9.11□□□□□ -0.95
SRP54-203ENST00000553544 M0R1X1 148 aa9.1□□□□□ -0.95
SRP54-203ENST00000553544 RPS19P39019 145 aaKnown RBP9.1□□□□□ -0.95
SRP54-203ENST00000553544 ALDH3B2P48448 385 aa9.1□□□□□ -0.95
SRP54-203ENST00000553544 VBP1P61758 197 aa9.1□□□□□ -0.95
SRP54-203ENST00000553544 NCS1P62166 190 aa9.1□□□□□ -0.95
SRP54-203ENST00000553544 AKIRIN2Q53H80 203 aa9.1□□□□□ -0.95
SRP54-203ENST00000553544 TMEM69Q5SWH9 247 aa9.1□□□□□ -0.95
SRP54-203ENST00000553544 ASPHD1Q5U4P2 390 aa9.1□□□□□ -0.95
SRP54-203ENST00000553544 GPR107Q5VW38 600 aa9.1□□□□□ -0.95
SRP54-203ENST00000553544 TCTEX1D1Q8N7M0 179 aa9.1□□□□□ -0.95
SRP54-203ENST00000553544 C15orf40Q8WUR7 153 aa9.1□□□□□ -0.95
SRP54-203ENST00000553544 FLYWCH2Q96CP2 140 aaKnown RBP9.1□□□□□ -0.95
SRP54-203ENST00000553544 OR5B12Q96R08 314 aa9.1□□□□□ -0.95
SRP54-203ENST00000553544 TSNAXQ99598 290 aaKnown RBP9.1□□□□□ -0.95
SRP54-203ENST00000553544 GNB4Q9HAV0 340 aa9.1□□□□□ -0.95
SRP54-203ENST00000553544 SLC35D1Q9NTN3 355 aa9.1□□□□□ -0.95
SRP54-203ENST00000553544 METTL1Q9UBP6 276 aaKnown RBP9.1□□□□□ -0.95
SRP54-203ENST00000553544 ADAM30Q9UKF2 790 aa9.1□□□□□ -0.95
SRP54-203ENST00000553544 TNCP24821 2201 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 STARD9Q9P2P6 4700 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 TMEM235A6NFC5 223 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 A8MZ25 164 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 XRCC3O43542 346 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 IGLV2-23P01705 113 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 APOA1P02647 267 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 APOA2P02652 100 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 IFNA6P05013 189 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 CRYGBP07316 175 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 IGHV4-30-4P0DP06 118 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 LGALS7P47929 136 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 TMBIM6P55061 237 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 RPS16P62249 146 aaKnown RBP9.09□□□□□ -0.95
SRP54-203ENST00000553544 GNB1P62873 340 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 SSBP2P81877 361 aaPredicted RBP9.09□□□□□ -0.95
SRP54-203ENST00000553544 TAGLNQ01995 201 aaKnown RBP9.09□□□□□ -0.95
SRP54-203ENST00000553544 TMEM267Q0VDI3 215 aaPredicted RBP9.09□□□□□ -0.95
SRP54-203ENST00000553544 PLGLAQ15195 96 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 SAMD12Q8N8I0 201 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 OR5H6Q8NGV6 325 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 IL17DQ8TAD2 202 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 DDB2Q92466 427 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 DLX4Q92988 240 aaPredicted RBP9.09□□□□□ -0.95
SRP54-203ENST00000553544 SLC25A38Q96DW6 304 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 TPSG1Q9NRR2 321 aa9.09□□□□□ -0.95
SRP54-203ENST00000553544 RBM7Q9Y580 266 aaKnown RBP9.09□□□□□ -0.95
SRP54-203ENST00000553544 TRAV18A0A075B6X5 111 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 A0A1W2PN81 502 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 ARPC1BO15143 372 aaKnown RBP9.08□□□□□ -0.96
SRP54-203ENST00000553544 SLC25A17O43808 307 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 SSX5O60225 188 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 SLC22A5O76082 557 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 CA2P00918 260 aa9.08□□□□□ -0.96
SRP54-203ENST00000553544 ZNF182P17025 639 aaPredicted RBP9.08□□□□□ -0.96
SRP54-203ENST00000553544 DUTP33316 252 aaKnown RBP9.08□□□□□ -0.96
SRP54-203ENST00000553544 CHRNA7P36544 502 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms