RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 CEMP1Q6PRD7 247 aaPredicted RBP5.44□□□□□ -1.54
ATXN3-219ENST00000553488 GLIPR1L1Q6UWM5 242 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 OR5T1Q8NG75 326 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 MUL1Q969V5 352 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 BANF2Q9H503 90 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 SLC2A8Q9NY64 477 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 KCNIP1Q9NZI2 227 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 PIPOXQ9P0Z9 390 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 HERC1Q15751 4861 aa5.44□□□□□ -1.54
ATXN3-219ENST00000553488 A0A0J9YWU9 116 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 MSGN1A6NI15 193 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 OR11H12B2RN74 326 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 H7C2Y5 167 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 ITGB1BP1O14713 200 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 GYG2O15488 501 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 AIREO43918 545 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 PDCD6O75340 191 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 LALBAP00709 142 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 ALPLP05186 524 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 CRYGBP07316 175 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 MC5RP33032 325 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 LINC00205P59089 165 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 RPS11P62280 158 aaKnown RBP eCLIP5.43□□□□□ -1.54
ATXN3-219ENST00000553488 TNFRSF9Q07011 255 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 PJVKQ0ZLH3 352 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 GPR176Q14439 515 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 MRGPRG-AS1Q2M3A8 158 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 DEFB114Q30KQ6 69 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 CCDC58Q4VC31 144 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 RPL22L1Q6P5R6 122 aaKnown RBP5.43□□□□□ -1.54
ATXN3-219ENST00000553488 ZNF880Q6PDB4 577 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 PQLC1Q8N2U9 271 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 ZNF383Q8NA42 475 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 CCDC197Q8NCU1 140 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 OR52I1Q8NGK6 324 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 GALMQ96C23 342 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 SMIM19Q96E16 107 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 ABHD14BQ96IU4 210 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 MYCBPQ99417 103 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-219ENST00000553488 SULT4A1Q9BR01 284 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 SELENOIQ9C0D9 397 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 ZNF355PQ9NSJ1 428 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 MRPS18AQ9NVS2 196 aaKnown RBP5.43□□□□□ -1.54
ATXN3-219ENST00000553488 PEMTQ9UBM1 199 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 LRP1BQ9NZR2 4599 aa5.43□□□□□ -1.54
ATXN3-219ENST00000553488 TRBV5-7A0A0A0MS05 114 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 SAC3D1A6NKF1 404 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 SNTNA6NMZ2 147 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 EI24O14681 340 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 BAG2O95816 211 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 NAPSAO96009 420 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 FCGR1AP12314 374 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 LGALS9CQ6DKI2 356 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 AWAT2Q6E213 333 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 LYG2Q86SG7 212 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 PDPNQ86YL7 162 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 JAGN1Q8N5M9 183 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 DRAXINQ8NBI3 349 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-219ENST00000553488 ADAD2Q8NCV1 583 aaKnown RBP5.42□□□□□ -1.54
ATXN3-219ENST00000553488 KCNG3Q8TAE7 436 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 CENPNQ96H22 339 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-219ENST00000553488 USMG5Q96IX5 58 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 PGLYRP3Q96LB9 341 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 TMEM68Q96MH6 324 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 TSNAXQ99598 290 aaKnown RBP5.42□□□□□ -1.54
ATXN3-219ENST00000553488 GGTLC1Q9BX51 225 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 AMBNQ9NP70 447 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 STEAP1Q9UHE8 339 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 ZNF230Q9UIE0 474 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-219ENST00000553488 AP4S1Q9Y587 144 aa5.42□□□□□ -1.54
ATXN3-219ENST00000553488 C2orf70A6NJV1 201 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 OGG1O15527 345 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 CRTAPO75718 401 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-219ENST00000553488 CAPGP40121 348 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 KIR2DS2P43631 304 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 ZNF45Q02386 682 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 EXOSC2Q13868 293 aaKnown RBP5.41□□□□□ -1.54
ATXN3-219ENST00000553488 SMN1Q16637 294 aaKnown RBP5.41□□□□□ -1.54
ATXN3-219ENST00000553488 TATDN3Q17R31 274 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 ZIK1Q3SY52 487 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-219ENST00000553488 Q499Y3 187 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 OR2G6Q5TZ20 316 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 TMEM61Q8N0U2 210 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 RHOXF1Q8NHV9 184 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 DYNLRB2Q8TF09 96 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 APH1BQ8WW43 257 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 IL1F10Q8WWZ1 152 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 SNAPC3Q92966 411 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 TRIM63Q969Q1 353 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 FAM46BQ96A09 425 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 C11orf54Q9H0W9 315 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-219ENST00000553488 COA4Q9NYJ1 87 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 OR1A1Q9P1Q5 309 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 C11orf21Q9P2W6 132 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 LRRC42Q9Y546 428 aa5.41□□□□□ -1.54
ATXN3-219ENST00000553488 APOBP04114 4563 aaKnown RBP5.41□□□□□ -1.54
ATXN3-219ENST00000553488 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.4□□□□□ -1.54
ATXN3-219ENST00000553488 TRBV6-6A0A0A6YYG2 114 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 TRBV9A0A0B4J1U6 114 aa5.4□□□□□ -1.54
ATXN3-219ENST00000553488 A0A0B4J203 849 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms