RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 C12orf57Q99622 126 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 ZNF251Q9BRH9 671 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 MAP1LC3BQ9GZQ8 125 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 SLC39A9Q9NUM3 307 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 OR6C3Q9NZP0 311 aa10.76□□□□□ -0.69
SHMT2-205ENST00000553474 IGLV3-9A0A075B6K5 115 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 CTXND1A0A1B0GTU2 59 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 UBE2L5PA0A1B0GUS4 154 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 PMS2P5A8MQ11 134 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 F2RL2O00254 374 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 IGHV2-5P01817 119 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 CRYABP02511 175 aaKnown RBP10.75□□□□□ -0.69
SHMT2-205ENST00000553474 KLF3P57682 345 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-205ENST00000553474 RELQ04864 619 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-205ENST00000553474 LY6DQ14210 128 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 ZNF726P1Q15940 193 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 TMEM30BQ3MIR4 351 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 FAM90A2PQ658T7 463 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 ADAM5Q6NVV9 412 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 Q6ZS92 163 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 ZNF808Q8N4W9 903 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-205ENST00000553474 IGKV1D-17A0A075B6S4 117 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 TMEM250H0YL14 139 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 MPDU1O75352 247 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 WISP2O76076 250 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 DUTP33316 252 aaKnown RBP10.75□□□□□ -0.69
SHMT2-205ENST00000553474 GPR12P47775 334 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 RAB7AP51149 207 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 NKX6-1P78426 367 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-205ENST00000553474 MORN2Q502X0 79 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 OR8G2PQ6IF36 304 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 SEM1Q6ZVN7 128 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-205ENST00000553474 OR13D1Q8NGV5 346 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 CA5BP1Q8WTZ4 195 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 S100PBPQ96BU1 408 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 GGACTQ9BVM4 153 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 SFXN3Q9BWM7 321 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 CTDSP1Q9GZU7 261 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 ZNF665Q9H7R5 613 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 MANBALQ9NQG1 85 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 PSG11Q9UQ72 335 aa10.75□□□□□ -0.69
SHMT2-205ENST00000553474 hCG_1809904A0A1W2PP81 198 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 A0A1W2PR64 198 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 A0A1W2PRV1 198 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 ZFP92A6NM28 416 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 LINC00473A8K010 186 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 AP4M1O00189 453 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 LHBP01229 141 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 S100A9P06702 114 aaKnown RBP10.74□□□□□ -0.69
SHMT2-205ENST00000553474 SELENOVP59797 346 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 RAB11AP62491 216 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 Q3ZCU0 254 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 C1orf185Q5T7R7 199 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 LCN15Q6UWW0 184 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 RPP25LQ8N5L8 163 aaKnown RBP10.74□□□□□ -0.69
SHMT2-205ENST00000553474 GCSAMQ8N6F7 178 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 RBMXL3Q8N7X1 1067 aaKnown RBP10.74□□□□□ -0.69
SHMT2-205ENST00000553474 ZNF709Q8N972 641 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 LHX4Q969G2 390 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 R3HDM4Q96D70 268 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 VSIRQ9H7M9 311 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 FZR1Q9UM11 496 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 SPTA1P02549 2419 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 NBEAQ8NFP9 2946 aa10.74□□□□□ -0.69
SHMT2-205ENST00000553474 DIDO1Q9BTC0 2240 aaKnown RBP10.73□□□□□ -0.69
SHMT2-205ENST00000553474 RBMXL2O75526 392 aaKnown RBP10.73□□□□□ -0.69
SHMT2-205ENST00000553474 CYB5R3P00387 301 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-205ENST00000553474 MDKP21741 143 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-205ENST00000553474 RND2P52198 227 aa10.73□□□□□ -0.69
SHMT2-205ENST00000553474 CEBPGP53567 150 aa10.73□□□□□ -0.69
SHMT2-205ENST00000553474 SPCS3P61009 180 aa10.73□□□□□ -0.69
SHMT2-205ENST00000553474 ELOBQ15370 118 aa10.73□□□□□ -0.69
SHMT2-205ENST00000553474 TMEM249Q2WGJ8 235 aa10.73□□□□□ -0.69
SHMT2-205ENST00000553474 KRTCAP3Q53RY4 240 aa10.73□□□□□ -0.69
SHMT2-205ENST00000553474 FAM222BQ8WU58 562 aa10.73□□□□□ -0.69
SHMT2-205ENST00000553474 MEGF10Q96KG7 1140 aa10.73□□□□□ -0.69
SHMT2-205ENST00000553474 DIRC2Q96SL1 478 aa10.73□□□□□ -0.69
SHMT2-205ENST00000553474 ACTR3CQ9C0K3 210 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-205ENST00000553474 SDF2L1Q9HCN8 221 aa10.73□□□□□ -0.69
SHMT2-205ENST00000553474 GNG12Q9UBI6 72 aa10.73□□□□□ -0.69
SHMT2-205ENST00000553474 METRNQ9UJH8 293 aa10.73□□□□□ -0.69
SHMT2-205ENST00000553474 SVILO95425 2214 aa10.73□□□□□ -0.69
SHMT2-205ENST00000553474 CEBPZOSA8MTT3 80 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 CLDN34H7C241 214 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 ST8SIA5O15466 376 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 ZG16O60844 167 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 EIF3GO75821 320 aaKnown RBP eCLIP10.72□□□□□ -0.69
SHMT2-205ENST00000553474 FGF7P21781 194 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 PSMB3P49720 205 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 ERVK-16P61578 105 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 MEF2BQ02080 365 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-205ENST00000553474 OR2B11Q5JQS5 317 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 BTNL3Q6UXE8 466 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 SSX8Q7RTT4 187 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 OR2V2Q96R30 315 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 CLN8Q9UBY8 286 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 DUSP13Q9UII6 198 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 HCFC1P51610 2035 aa10.72□□□□□ -0.69
SHMT2-205ENST00000553474 CYB5BO43169 146 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms