RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 PFN1P07737 140 aaKnown RBP3.32□□□□□ -1.88
HCFC2-204ENST00000550335 PTHLHP12272 177 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 GADD45AP24522 165 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 PSMA1P25786 263 aaKnown RBP3.32□□□□□ -1.88
HCFC2-204ENST00000550335 EMP2P54851 167 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 ENDOGQ14249 297 aaKnown RBP3.32□□□□□ -1.88
HCFC2-204ENST00000550335 TBC1D28Q2M2D7 210 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 CENPWQ5EE01 88 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 BRMS1LQ5PSV4 323 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 DNLZQ5SXM8 178 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 C16orf47Q6ZP98 133 aaPredicted RBP3.32□□□□□ -1.88
HCFC2-204ENST00000550335 Q6ZS52 159 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 ZFP82Q8N141 532 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 TMEM35BQ8NCS4 154 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 TSTD1Q8NFU3 115 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 STOML3Q8TAV4 291 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 TMA16Q96EY4 203 aaKnown RBP3.32□□□□□ -1.88
HCFC2-204ENST00000550335 TRAPPC1Q9Y5R8 145 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 PATJQ8NI35 1801 aa3.32□□□□□ -1.88
HCFC2-204ENST00000550335 F5P12259 2224 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 FANCMQ8IYD8 2048 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 HELZP42694 1942 aaKnown RBP3.31□□□□□ -1.88
HCFC2-204ENST00000550335 IGHV3OR16-8A0A075B7F1 116 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 A6NED7 52 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 F5H768 121 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 POP7O75817 140 aaKnown RBP3.31□□□□□ -1.88
HCFC2-204ENST00000550335 ARL6IP5O75915 188 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 APOEP02649 317 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 COX5BP10606 129 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 CD99P14209 185 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 ZNF14P17017 642 aaPredicted RBP3.31□□□□□ -1.88
HCFC2-204ENST00000550335 RPL14P50914 215 aaKnown RBP3.31□□□□□ -1.88
HCFC2-204ENST00000550335 GABARAPL2P60520 117 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 C4orf26Q17RF5 130 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 TMEM69Q5SWH9 247 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 LDLRAD2Q5SZI1 272 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 MRPL2Q5T653 305 aaKnown RBP3.31□□□□□ -1.88
HCFC2-204ENST00000550335 KPRPQ5T749 579 aaPredicted RBP3.31□□□□□ -1.88
HCFC2-204ENST00000550335 SPINT4Q6UDR6 99 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 SPNS3Q6ZMD2 512 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 DOLPP1Q86YN1 238 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 ZNF680Q8NEM1 530 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 OR1P1Q8NH06 330 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 OR4A5Q8NH83 315 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 CYGBQ8WWM9 190 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 BCL2L14Q9BZR8 327 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 USE1Q9NZ43 259 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 MUC6Q6W4X9 2439 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 CACNA1HO95180 2353 aa3.31□□□□□ -1.88
HCFC2-204ENST00000550335 ZNF638Q14966 1978 aaKnown RBP3.31□□□□□ -1.88
HCFC2-204ENST00000550335 IGHV3-21A0A0B4J1V1 117 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 A0A0B4J2C4 111 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 F5H5T6 163 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 BIRC5O15392 142 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 E2F6O75461 281 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 IGKV1D-33P01593 117 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 IGKV1-33P01594 117 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 CALB1P05937 261 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 OCM2P0CE71 109 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 HIST1H1CP16403 213 aaKnown RBP3.3□□□□□ -1.88
HCFC2-204ENST00000550335 CFL1P23528 166 aaKnown RBP3.3□□□□□ -1.88
HCFC2-204ENST00000550335 CNTFRP26992 372 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 CRABP2P29373 138 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 GABRA3P34903 492 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 EVI2BP34910 448 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 TGFBR2P37173 567 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 DEFA6Q01524 100 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 CLEC12BQ2HXU8 276 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 PDZD11Q5EBL8 140 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 SYPL2Q5VXT5 272 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 PTRHD1Q6GMV3 140 aaKnown RBP3.3□□□□□ -1.88
HCFC2-204ENST00000550335 PAGE2Q7Z2X7 111 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 MTERF4Q7Z6M4 381 aaKnown RBP3.3□□□□□ -1.88
HCFC2-204ENST00000550335 TAC4Q86UU9 113 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 NT5DC3Q86UY8 548 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 PHF13Q86YI8 300 aaPredicted RBP3.3□□□□□ -1.88
HCFC2-204ENST00000550335 DEFB106AQ8N104 65 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 C2orf73Q8N5S3 287 aaPredicted RBP3.3□□□□□ -1.88
HCFC2-204ENST00000550335 YIPF5Q969M3 257 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 TAMM41Q96BW9 452 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 PPCDCQ96CD2 204 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 ARL6Q9H0F7 186 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 GLS2Q9UI32 602 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 POLR3HQ9Y535 204 aaPredicted RBP3.3□□□□□ -1.88
HCFC2-204ENST00000550335 SNX10Q9Y5X0 201 aa3.3□□□□□ -1.88
HCFC2-204ENST00000550335 NUP205Q92621 2012 aa3.29□□□□□ -1.88
HCFC2-204ENST00000550335 IGHV3-43A0A0B4J1X8 118 aa3.29□□□□□ -1.88
HCFC2-204ENST00000550335 TINCRA0A1B0GVN0 87 aa3.29□□□□□ -1.88
HCFC2-204ENST00000550335 OR5H14A6NHG9 310 aa3.29□□□□□ -1.88
HCFC2-204ENST00000550335 SIGLEC16A6NMB1 481 aa3.29□□□□□ -1.88
HCFC2-204ENST00000550335 ZNF729A6NN14 1252 aaPredicted RBP3.29□□□□□ -1.88
HCFC2-204ENST00000550335 C10orf142B7Z368 130 aa3.29□□□□□ -1.88
HCFC2-204ENST00000550335 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.29□□□□□ -1.88
HCFC2-204ENST00000550335 GYPCP04921 128 aa3.29□□□□□ -1.88
HCFC2-204ENST00000550335 CELP19835 753 aa3.29□□□□□ -1.88
HCFC2-204ENST00000550335 AGTR1P30556 359 aa3.29□□□□□ -1.88
HCFC2-204ENST00000550335 MAGEA2P43356 314 aa3.29□□□□□ -1.88
HCFC2-204ENST00000550335 KLF3P57682 345 aaPredicted RBP3.29□□□□□ -1.88
HCFC2-204ENST00000550335 BIKQ13323 160 aa3.29□□□□□ -1.88
HCFC2-204ENST00000550335 MED21Q13503 144 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms