RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 GRPEL2Q8TAA5 225 aa5.83□□□□□ -1.48
NEK3-201ENST00000550331 ISOC1Q96CN7 298 aa5.83□□□□□ -1.48
NEK3-201ENST00000550331 HDHD3Q9BSH5 251 aaPredicted RBP5.83□□□□□ -1.48
NEK3-201ENST00000550331 RSRP1Q9BUV0 290 aa5.83□□□□□ -1.48
NEK3-201ENST00000550331 EDA2RQ9HAV5 297 aa5.83□□□□□ -1.48
NEK3-201ENST00000550331 PLGRKTQ9HBL7 147 aa5.83□□□□□ -1.48
NEK3-201ENST00000550331 RDH8Q9NYR8 311 aa5.83□□□□□ -1.48
NEK3-201ENST00000550331 LSM2Q9Y333 95 aaKnown RBP5.83□□□□□ -1.48
NEK3-201ENST00000550331 IGKV1-6A0A0C4DH72 117 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 ERICH4A6NGS2 130 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 TRDCB7Z8K6 153 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 H0Y980 276 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 M0R1X1 148 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 ARL6IP5O75915 188 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 CNIH1O95406 144 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 DIRAS3O95661 229 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 CRYGBP07316 175 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 AADACP22760 399 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 PSMA1P25786 263 aaKnown RBP5.82□□□□□ -1.48
NEK3-201ENST00000550331 LGALS7P47929 136 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 VEGFCP49767 419 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 TMEM50BP56557 158 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 KLF5Q13887 457 aaPredicted RBP5.82□□□□□ -1.48
NEK3-201ENST00000550331 RCN1Q15293 331 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 P2RY14Q15391 338 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 MED22Q15528 200 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 TRAM1Q15629 374 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 RAB11BQ15907 218 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 HAPLN4Q86UW8 402 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 UFD1Q92890 307 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 ARHGAP5-AS1Q96IT6 56 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 CMSS1Q9BQ75 279 aaKnown RBP5.82□□□□□ -1.48
NEK3-201ENST00000550331 SPATA25Q9BR10 227 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 VCXQ9H320 206 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 ZNF355PQ9NSJ1 428 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 SLC35D1Q9NTN3 355 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 SIGLEC8Q9NYZ4 499 aa5.82□□□□□ -1.48
NEK3-201ENST00000550331 FABP7O15540 132 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 OR2A4O95047 310 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 IGLV2-23P01705 113 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 LINC00310P59036 64 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 LINC00205P59089 165 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 TPBGQ13641 420 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 IRF3Q14653 427 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 PLAC9Q5JTB6 97 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 LIPKQ5VXJ0 399 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 ZNF343Q6P1L6 599 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 IL34Q6ZMJ4 242 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 TMEM91Q6ZNR0 172 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 OR5T1Q8NG75 326 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 OR56B1Q8NGI3 324 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 OR4A4PQ8NGN8 299 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 TMEM203Q969S6 136 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 USMG5Q96IX5 58 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 HARBI1Q96MB7 349 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 GFI1Q99684 422 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 THAP7Q9BT49 309 aaPredicted RBP5.81□□□□□ -1.48
NEK3-201ENST00000550331 CABLES2Q9BTV7 478 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 PECRQ9BY49 303 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 TINAGL1Q9GZM7 467 aaPredicted RBP5.81□□□□□ -1.48
NEK3-201ENST00000550331 SDHAF2Q9NX18 166 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 SCN3BQ9NY72 215 aa5.81□□□□□ -1.48
NEK3-201ENST00000550331 PEF1Q9UBV8 284 aaKnown RBP5.81□□□□□ -1.48
NEK3-201ENST00000550331 TRBV6-7A0A0A0MS04 114 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 PTGES3LE9PB15 166 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 SHOXO15266 292 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 JTBO76095 146 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 IFNA6P05013 189 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 RRASP10301 218 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 ATF4P18848 351 aaPredicted RBP5.8□□□□□ -1.48
NEK3-201ENST00000550331 PSMD7P51665 324 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 SYNJ2BPP57105 145 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 MRPS15P82914 257 aaKnown RBP5.8□□□□□ -1.48
NEK3-201ENST00000550331 PJVKQ0ZLH3 352 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 MLLT11Q13015 90 aaPredicted RBP5.8□□□□□ -1.48
NEK3-201ENST00000550331 CBX3Q13185 183 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 DYRK1AQ13627 763 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 HAGHQ16775 308 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 TATDN3Q17R31 274 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 RTL8BQ17RB0 113 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 RPEL1Q2QD12 228 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 TMEM177Q53S58 311 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 LCN12Q6JVE5 192 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 GTSCR1Q86UQ5 136 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 Q8N402 240 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 TEX45Q8NA69 505 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 OR10J5Q8NHC4 309 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 FAM3DQ96BQ1 224 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 ADTRPQ96IZ2 230 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 CENPOQ9BU64 300 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 OR2D2Q9H210 308 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 COA4Q9NYJ1 87 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 PEMTQ9UBM1 199 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 KCNK7Q9Y2U2 307 aa5.8□□□□□ -1.48
NEK3-201ENST00000550331 AK6Q9Y3D8 172 aaKnown RBP5.8□□□□□ -1.48
NEK3-201ENST00000550331 A0A0B4J203 849 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 ANKRD34BA5PLL1 514 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 FAM223BA6NKX1 122 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 BET1O15155 118 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 DENRO43583 198 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms