RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 HIST1H2BBP33778 126 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 ATP5G3P48201 142 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 HIST1H2BDP58876 126 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 ERVFC1-1P60608 527 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 HIST1H2BCP62807 126 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 ELOBQ15370 118 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 HIST2H2BEQ16778 126 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.94□□□□□ -0.5
CACNB3-209ENST00000548860 HIST1H2BHQ93079 126 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 CCL13Q99616 98 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 HIST1H2BNQ99877 126 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 HIST1H2BMQ99879 126 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 TMEM147Q9BVK8 224 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 DCAF16Q9NXF7 216 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 CEACAM18A8MTB9 384 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 H3BTX0 84 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 MRGPRGQ86SM5 289 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 ZNF525Q8N782 197 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 TMEM56Q96MV1 263 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 TMEM56-RWDD3S4R434 201 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 MARCH11A6NNE9 402 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 HIST1H3AP68431 136 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 SLC35E3Q7Z769 313 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 H1FOOQ8IZA3 346 aaPredicted RBP11.94□□□□□ -0.5
CACNB3-209ENST00000548860 OR2T10Q8NGZ9 312 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 IMMP2LQ96T52 175 aa11.94□□□□□ -0.5
CACNB3-209ENST00000548860 CHD3Q12873 2000 aaKnown RBP11.93□□□□□ -0.5
CACNB3-209ENST00000548860 GALR2O43603 387 aaPredicted RBP11.93□□□□□ -0.5
CACNB3-209ENST00000548860 SOD3P08294 240 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 PLGLAQ15195 96 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 NMSQ5H8A3 153 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 ZNF324BQ6AW86 544 aaPredicted RBP11.93□□□□□ -0.5
CACNB3-209ENST00000548860 NEIL1Q96FI4 390 aaPredicted RBP11.93□□□□□ -0.5
CACNB3-209ENST00000548860 MALRD1Q5VYJ5 2156 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 A0A1B0GUS0 222 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 KLK10O43240 276 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 NAPSAO96009 420 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 COL8A2P25067 703 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 KRTDAPP60985 99 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 TMEM42Q69YG0 159 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 FAM214BQ7L5A3 538 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 SGMS2Q8NHU3 365 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 SARAFQ96BY9 339 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 UHRF2Q96PU4 802 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 OR2V2Q96R30 315 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 DERL1Q9BUN8 251 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 WDR61Q9GZS3 305 aaKnown RBP11.93□□□□□ -0.5
CACNB3-209ENST00000548860 ZNRD1Q9P1U0 126 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 LOC102723971A0A1B0GUV8 181 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 SEC14L6B5MCN3 397 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 SMPD2O60906 423 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 TCF23Q7RTU1 214 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 RPP25LQ8N5L8 163 aaKnown RBP11.93□□□□□ -0.5
CACNB3-209ENST00000548860 NAT8Q9UHE5 227 aa11.93□□□□□ -0.5
CACNB3-209ENST00000548860 FOXI3A8MTJ6 420 aaPredicted RBP11.92□□□□□ -0.5
CACNB3-209ENST00000548860 ETV2O00321 342 aaPredicted RBP11.92□□□□□ -0.5
CACNB3-209ENST00000548860 CYB5R3P00387 301 aaPredicted RBP11.92□□□□□ -0.5
CACNB3-209ENST00000548860 PMCHP20382 165 aa11.92□□□□□ -0.5
CACNB3-209ENST00000548860 PYY3Q5JQD4 70 aa11.92□□□□□ -0.5
CACNB3-209ENST00000548860 SSX7Q7RTT5 188 aa11.92□□□□□ -0.5
CACNB3-209ENST00000548860 ZPBPQ9BS86 351 aa11.92□□□□□ -0.5
CACNB3-209ENST00000548860 DYNLRB1Q9NP97 96 aa11.92□□□□□ -0.5
CACNB3-209ENST00000548860 A0A1B0GV90 55 aa11.92□□□□□ -0.5
CACNB3-209ENST00000548860 IFNL4K9M1U5 179 aa11.92□□□□□ -0.5
CACNB3-209ENST00000548860 SLC17A3O00476 420 aa11.92□□□□□ -0.5
CACNB3-209ENST00000548860 FXYD3Q14802 87 aa11.92□□□□□ -0.5
CACNB3-209ENST00000548860 PCSK4Q6UW60 755 aa11.92□□□□□ -0.5
CACNB3-209ENST00000548860 ITLN1Q8WWA0 313 aa11.92□□□□□ -0.5
CACNB3-209ENST00000548860 RYDENQ9NUL5 291 aaKnown RBP11.92□□□□□ -0.5
CACNB3-209ENST00000548860 LOC400499M0QZD8 3231 aa11.92□□□□□ -0.5
CACNB3-209ENST00000548860 OOEPA6NGQ2 149 aa11.92□□□□□ -0.5
CACNB3-209ENST00000548860 LYL1P12980 280 aa11.92□□□□□ -0.5
CACNB3-209ENST00000548860 MRPL54Q6P161 138 aaKnown RBP11.92□□□□□ -0.5
CACNB3-209ENST00000548860 NUP210LQ5VU65 1888 aa11.92□□□□□ -0.5
CACNB3-209ENST00000548860 CECR9P0C854 216 aa11.91□□□□□ -0.5
CACNB3-209ENST00000548860 CD1BP29016 333 aa11.91□□□□□ -0.5
CACNB3-209ENST00000548860 PAX9P55771 341 aa11.91□□□□□ -0.5
CACNB3-209ENST00000548860 TOMM20LQ6UXN7 152 aa11.91□□□□□ -0.5
CACNB3-209ENST00000548860 HEPN1Q6WQI6 88 aa11.91□□□□□ -0.5
CACNB3-209ENST00000548860 Q8IYB0 196 aa11.91□□□□□ -0.5
CACNB3-209ENST00000548860 SSC4DQ8WTU2 575 aa11.91□□□□□ -0.5
CACNB3-209ENST00000548860 M0R296 226 aa11.91□□□□□ -0.5
CACNB3-209ENST00000548860 DKK1O94907 266 aa11.91□□□□□ -0.5
CACNB3-209ENST00000548860 P2RY6Q15077 328 aa11.91□□□□□ -0.5
CACNB3-209ENST00000548860 BLNKQ8WV28 456 aa11.91□□□□□ -0.5
CACNB3-209ENST00000548860 BCL2L2Q92843 193 aaPredicted RBP11.91□□□□□ -0.5
CACNB3-209ENST00000548860 CXXC4Q9H2H0 198 aa11.91□□□□□ -0.5
CACNB3-209ENST00000548860 TUBA4BQ9H853 241 aa11.91□□□□□ -0.5
CACNB3-209ENST00000548860 IGKV1-39P01597 117 aa11.91□□□□□ -0.5
CACNB3-209ENST00000548860 IGKV1D-39P04432 117 aa11.91□□□□□ -0.5
CACNB3-209ENST00000548860 PSG5Q15238 335 aa11.91□□□□□ -0.5
CACNB3-209ENST00000548860 STUMQ69YW2 141 aa11.91□□□□□ -0.5
CACNB3-209ENST00000548860 METTL1Q9UBP6 276 aaKnown RBP11.91□□□□□ -0.5
CACNB3-209ENST00000548860 ANAPC10Q9UM13 185 aa11.91□□□□□ -0.5
CACNB3-209ENST00000548860 A8MXE2 369 aa11.9□□□□□ -0.5
CACNB3-209ENST00000548860 CDX1P47902 265 aaPredicted RBP11.9□□□□□ -0.5
CACNB3-209ENST00000548860 OR51M1Q9H341 326 aa11.9□□□□□ -0.5
CACNB3-209ENST00000548860 TRAV3A0A0B4J244 114 aa11.9□□□□□ -0.5
CACNB3-209ENST00000548860 NDUFA2O43678 99 aa11.9□□□□□ -0.5
CACNB3-209ENST00000548860 C1QTNF9P0C862 333 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms