RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 HSPB9Q9BQS6 159 aa19.38■□□□□ 0.69
NPAS3-206ENST00000548645 VAMP8Q9BV40 100 aa19.38■□□□□ 0.69
NPAS3-206ENST00000548645 DIDO1Q9BTC0 2240 aaKnown RBP19.37■□□□□ 0.69
NPAS3-206ENST00000548645 BRS3P32247 399 aa19.37■□□□□ 0.69
NPAS3-206ENST00000548645 TIMP3P35625 211 aa19.37■□□□□ 0.69
NPAS3-206ENST00000548645 TDRG1Q3Y452 100 aa19.37■□□□□ 0.69
NPAS3-206ENST00000548645 GCSAMLQ5JQS6 135 aa19.37■□□□□ 0.69
NPAS3-206ENST00000548645 Q8N7P7 452 aa19.37■□□□□ 0.69
NPAS3-206ENST00000548645 RTL8AQ9BWD3 113 aa19.37■□□□□ 0.69
NPAS3-206ENST00000548645 SH2D1BO14796 132 aa19.37■□□□□ 0.69
NPAS3-206ENST00000548645 CD1BP29016 333 aa19.37■□□□□ 0.69
NPAS3-206ENST00000548645 ZNF90Q03938 601 aa19.37■□□□□ 0.69
NPAS3-206ENST00000548645 POLDIP2Q9Y2S7 368 aa19.37■□□□□ 0.69
NPAS3-206ENST00000548645 CACNA1EQ15878 2313 aa19.36■□□□□ 0.69
NPAS3-206ENST00000548645 TRBV20OR9-2A0A075B6H5 130 aa19.36■□□□□ 0.69
NPAS3-206ENST00000548645 LHX2P50458 406 aa19.36■□□□□ 0.69
NPAS3-206ENST00000548645 SRYQ05066 204 aa19.36■□□□□ 0.69
NPAS3-206ENST00000548645 OR5AU1Q8NGC0 362 aa19.36■□□□□ 0.69
NPAS3-206ENST00000548645 GALMQ96C23 342 aa19.36■□□□□ 0.69
NPAS3-206ENST00000548645 LPAR2Q9HBW0 351 aa19.36■□□□□ 0.69
NPAS3-206ENST00000548645 PAM16Q9Y3D7 125 aa19.36■□□□□ 0.69
NPAS3-206ENST00000548645 C17orf98A8MV24 154 aa19.36■□□□□ 0.69
NPAS3-206ENST00000548645 SERF1AO75920 110 aa19.36■□□□□ 0.69
NPAS3-206ENST00000548645 EDDM3BP56851 147 aa19.36■□□□□ 0.69
NPAS3-206ENST00000548645 CBLN1P23435 193 aa19.35■□□□□ 0.69
NPAS3-206ENST00000548645 TNFSF10P50591 281 aa19.35■□□□□ 0.69
NPAS3-206ENST00000548645 EIF4EBP1Q13541 118 aaPredicted RBP19.35■□□□□ 0.69
NPAS3-206ENST00000548645 ESPL1Q14674 2120 aa19.35■□□□□ 0.69
NPAS3-206ENST00000548645 IGFBP7Q16270 282 aa19.35■□□□□ 0.69
NPAS3-206ENST00000548645 TCTEX1D1Q8N7M0 179 aa19.35■□□□□ 0.69
NPAS3-206ENST00000548645 SAP25Q8TEE9 199 aa19.35■□□□□ 0.69
NPAS3-206ENST00000548645 LINC00310P59036 64 aa19.35■□□□□ 0.69
NPAS3-206ENST00000548645 ERVK11-1P61568 191 aa19.35■□□□□ 0.69
NPAS3-206ENST00000548645 SPINK9Q5DT21 86 aa19.35■□□□□ 0.69
NPAS3-206ENST00000548645 C5orf30Q96GV9 206 aa19.35■□□□□ 0.69
NPAS3-206ENST00000548645 QTRT1Q9BXR0 403 aaKnown RBP19.35■□□□□ 0.69
NPAS3-206ENST00000548645 OR2J1Q9GZK6 312 aa19.35■□□□□ 0.69
NPAS3-206ENST00000548645 MRPL18Q9H0U6 180 aaKnown RBP19.35■□□□□ 0.69
NPAS3-206ENST00000548645 PINLYPA6NC86 204 aa19.34■□□□□ 0.69
NPAS3-206ENST00000548645 C15orf62A8K5M9 175 aa19.34■□□□□ 0.69
NPAS3-206ENST00000548645 NXPH2O95156 264 aa19.34■□□□□ 0.69
NPAS3-206ENST00000548645 TRIP6Q15654 476 aaKnown RBP19.34■□□□□ 0.69
NPAS3-206ENST00000548645 ARSJQ5FYB0 599 aaPredicted RBP19.34■□□□□ 0.69
NPAS3-206ENST00000548645 LRP11Q86VZ4 500 aa19.34■□□□□ 0.69
NPAS3-206ENST00000548645 BAGE3Q86Y29 109 aa19.34■□□□□ 0.69
NPAS3-206ENST00000548645 BAGE2Q86Y30 109 aa19.34■□□□□ 0.69
NPAS3-206ENST00000548645 SCCPDHQ8NBX0 429 aa19.34■□□□□ 0.69
NPAS3-206ENST00000548645 OCC1Q8TAD7 63 aa19.34■□□□□ 0.69
NPAS3-206ENST00000548645 VN1R17PQ8TDU5 208 aa19.34■□□□□ 0.69
NPAS3-206ENST00000548645 TAAR6Q96RI8 345 aa19.34■□□□□ 0.69
NPAS3-206ENST00000548645 IL36BQ9NZH7 164 aa19.34■□□□□ 0.69
NPAS3-206ENST00000548645 MPDU1O75352 247 aa19.34■□□□□ 0.69
NPAS3-206ENST00000548645 ZNF146Q15072 292 aa19.34■□□□□ 0.69
NPAS3-206ENST00000548645 APH1AQ96BI3 265 aa19.34■□□□□ 0.69
NPAS3-206ENST00000548645 CCL4P13236 92 aa19.33■□□□□ 0.69
NPAS3-206ENST00000548645 BRWD1-AS2P59051 145 aa19.33■□□□□ 0.69
NPAS3-206ENST00000548645 HLA-CQ95604 372 aa19.33■□□□□ 0.69
NPAS3-206ENST00000548645 SAMD10Q9BYL1 202 aa19.33■□□□□ 0.69
NPAS3-206ENST00000548645 NEURL1O76050 574 aa19.33■□□□□ 0.68
NPAS3-206ENST00000548645 ARL14EPLP0DKL9 152 aa19.33■□□□□ 0.68
NPAS3-206ENST00000548645 CDKN1AP38936 164 aa19.33■□□□□ 0.68
NPAS3-206ENST00000548645 CYB561P49447 251 aa19.33■□□□□ 0.68
NPAS3-206ENST00000548645 MCEMP1Q8IX19 187 aa19.33■□□□□ 0.68
NPAS3-206ENST00000548645 SPEM1Q8N4L4 309 aa19.33■□□□□ 0.68
NPAS3-206ENST00000548645 TMEM30CPA0ZSE6 113 aa19.32■□□□□ 0.68
NPAS3-206ENST00000548645 IFI44Q8TCB0 444 aa19.32■□□□□ 0.68
NPAS3-206ENST00000548645 NINJ1Q92982 152 aa19.32■□□□□ 0.68
NPAS3-206ENST00000548645 SCO2A0A1W2PP80 73 aa19.32■□□□□ 0.68
NPAS3-206ENST00000548645 CXorf1O96002 111 aa19.32■□□□□ 0.68
NPAS3-206ENST00000548645 IGHEP01854 428 aa19.32■□□□□ 0.68
NPAS3-206ENST00000548645 HNF1AP20823 631 aa19.32■□□□□ 0.68
NPAS3-206ENST00000548645 Q0VFX4 171 aa19.32■□□□□ 0.68
NPAS3-206ENST00000548645 BATFQ16520 125 aa19.32■□□□□ 0.68
NPAS3-206ENST00000548645 WDR86Q86TI4 376 aa19.32■□□□□ 0.68
NPAS3-206ENST00000548645 OR52L2PQ8NGH6 319 aa19.32■□□□□ 0.68
NPAS3-206ENST00000548645 BOKQ9UMX3 212 aaPredicted RBP19.32■□□□□ 0.68
NPAS3-206ENST00000548645 MUC3AQ02505 3323 aa19.32■□□□□ 0.68
NPAS3-206ENST00000548645 STAG3L2P0CL84 134 aa19.31■□□□□ 0.68
NPAS3-206ENST00000548645 STAG3L3P0CL85 134 aa19.31■□□□□ 0.68
NPAS3-206ENST00000548645 OPRK1P41145 380 aa19.31■□□□□ 0.68
NPAS3-206ENST00000548645 USF3Q68DE3 2245 aa19.31■□□□□ 0.68
NPAS3-206ENST00000548645 C12orf77C9JDV5 145 aa19.31■□□□□ 0.68
NPAS3-206ENST00000548645 THBS3P49746 956 aa19.31■□□□□ 0.68
NPAS3-206ENST00000548645 Q0VG73 95 aa19.31■□□□□ 0.68
NPAS3-206ENST00000548645 SPATA46Q5T0L3 261 aa19.31■□□□□ 0.68
NPAS3-206ENST00000548645 IL6RP08887 468 aaPredicted RBP19.31■□□□□ 0.68
NPAS3-206ENST00000548645 SELEP16581 610 aa19.31■□□□□ 0.68
NPAS3-206ENST00000548645 OTX2P32243 289 aa19.31■□□□□ 0.68
NPAS3-206ENST00000548645 PDLIM3Q53GG5 364 aaPredicted RBP19.3■□□□□ 0.68
NPAS3-206ENST00000548645 COL5A1-AS1Q5SY13 56 aa19.3■□□□□ 0.68
NPAS3-206ENST00000548645 OR1L6Q8NGR2 347 aa19.3■□□□□ 0.68
NPAS3-206ENST00000548645 PRO3102Q9H379 93 aa19.3■□□□□ 0.68
NPAS3-206ENST00000548645 A8MXE2 369 aa19.3■□□□□ 0.68
NPAS3-206ENST00000548645 FCN1O00602 326 aa19.3■□□□□ 0.68
NPAS3-206ENST00000548645 MT-CO3P00414 261 aa19.3■□□□□ 0.68
NPAS3-206ENST00000548645 MRPS11P82912 194 aaKnown RBP19.3■□□□□ 0.68
NPAS3-206ENST00000548645 WDR31Q8NA23 367 aa19.3■□□□□ 0.68
NPAS3-206ENST00000548645 MED12LQ86YW9 2145 aa19.3■□□□□ 0.68
NPAS3-206ENST00000548645 CFAP54Q96N23 3096 aa19.3■□□□□ 0.68
NPAS3-206ENST00000548645 OOEPA6NGQ2 149 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms