RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 CEACAM8P31997 349 aaPredicted RBP12.88□□□□□ -0.35
BRF1-212ENST00000547562 HNF4GQ14541 408 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 ACSM6Q6P461 480 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 HEPN1Q6WQI6 88 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 CA5BP1Q8WTZ4 195 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 P2RX4Q99571 388 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 QTRT1Q9BXR0 403 aaKnown RBP12.88□□□□□ -0.35
BRF1-212ENST00000547562 SLC39A9Q9NUM3 307 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 VAX2Q9UIW0 290 aa12.88□□□□□ -0.35
BRF1-212ENST00000547562 M0R1X1 148 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 KLK10O43240 276 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 OR9G9P0C7N8 305 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 GATA4P43694 442 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 ZNF134P52741 427 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 PMS2P11Q13670 270 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 VWC2Q2TAL6 325 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 AARDQ4LEZ3 155 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 LHX4Q969G2 390 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 OR6C3Q9NZP0 311 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 ZFHX2Q9C0A1 2572 aaPredicted RBP12.87□□□□□ -0.35
BRF1-212ENST00000547562 MAP1BP46821 2468 aaKnown RBP12.87□□□□□ -0.35
BRF1-212ENST00000547562 A0A1W2PPE3 182 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 FAM90A9PA6NNJ1 464 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 IFNA1P01562 189 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 OR2B8PP59922 312 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 RPS16P62249 146 aaKnown RBP12.87□□□□□ -0.35
BRF1-212ENST00000547562 GNB2P62879 340 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 RPL39P5Q59GN2 51 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 IFI27L2Q9H2X8 130 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 SIRT7Q9NRC8 400 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 CALYQ9NYX4 217 aa12.87□□□□□ -0.35
BRF1-212ENST00000547562 ZMAT5Q9UDW3 170 aaKnown RBP12.87□□□□□ -0.35
BRF1-212ENST00000547562 TET2Q6N021 2002 aaPredicted RBP12.86□□□□□ -0.35
BRF1-212ENST00000547562 RAI1Q7Z5J4 1906 aaPredicted RBP12.86□□□□□ -0.35
BRF1-212ENST00000547562 TFF3Q07654 80 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 KRTCAP3Q53RY4 240 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 FAM201AQ5SY85 155 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 C1QL4Q86Z23 238 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 FAM57AQ8TBR7 257 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 FAM222BQ8WU58 562 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 C12orf57Q99622 126 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 NCOR1P1Q9H4R4 102 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 CXorf65A6NEN9 183 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 B4DEV8 164 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 UBE2CO00762 179 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 RBFOX2O43251 390 aaKnown RBP eCLIP12.86□□□□□ -0.35
BRF1-212ENST00000547562 EIF3GO75821 320 aaKnown RBP eCLIP12.86□□□□□ -0.35
BRF1-212ENST00000547562 IGHV3-7P01780 117 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 MBP02144 154 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 CGB3P0DN86 165 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 CGB7P0DN87 165 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 FAM27E3Q08E93 113 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 C22orf34Q6ZV56 151 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 Q8TCH9 128 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 NPCDR1Q9BY65 106 aa12.86□□□□□ -0.35
BRF1-212ENST00000547562 C15orf62A8K5M9 175 aa12.85□□□□□ -0.35
BRF1-212ENST00000547562 A8MXE2 369 aa12.85□□□□□ -0.35
BRF1-212ENST00000547562 IFNA17P01571 189 aa12.85□□□□□ -0.35
BRF1-212ENST00000547562 SELLP14151 372 aa12.85□□□□□ -0.35
BRF1-212ENST00000547562 MDKP21741 143 aaPredicted RBP12.85□□□□□ -0.35
BRF1-212ENST00000547562 SELENOVP59797 346 aa12.85□□□□□ -0.35
BRF1-212ENST00000547562 PNRC1Q12796 327 aaPredicted RBP12.85□□□□□ -0.35
BRF1-212ENST00000547562 ELOBQ15370 118 aa12.85□□□□□ -0.35
BRF1-212ENST00000547562 PRAMEF5Q5TYX0 476 aa12.85□□□□□ -0.35
BRF1-212ENST00000547562 PRSS33Q8NF86 280 aa12.85□□□□□ -0.35
BRF1-212ENST00000547562 FAM234AQ9H0X4 552 aa12.85□□□□□ -0.35
BRF1-212ENST00000547562 GCM1Q9NP62 436 aa12.85□□□□□ -0.35
BRF1-212ENST00000547562 CTXND1A0A1B0GTU2 59 aa12.84□□□□□ -0.35
BRF1-212ENST00000547562 BMP5P22003 454 aa12.84□□□□□ -0.35
BRF1-212ENST00000547562 C17orf58Q2M2W7 97 aa12.84□□□□□ -0.35
BRF1-212ENST00000547562 FFAR4Q5NUL3 377 aa12.84□□□□□ -0.35
BRF1-212ENST00000547562 RBMS3Q6XE24 437 aaKnown RBP12.84□□□□□ -0.35
BRF1-212ENST00000547562 SSX9Q7RTT3 188 aa12.84□□□□□ -0.35
BRF1-212ENST00000547562 OR10G9Q8NGN4 311 aa12.84□□□□□ -0.35
BRF1-212ENST00000547562 OR10G7Q8NGN6 311 aa12.84□□□□□ -0.35
BRF1-212ENST00000547562 SLC25A22Q9H936 323 aa12.84□□□□□ -0.35
BRF1-212ENST00000547562 RNF7Q9UBF6 113 aa12.84□□□□□ -0.35
BRF1-212ENST00000547562 IL19Q9UHD0 177 aa12.84□□□□□ -0.35
BRF1-212ENST00000547562 ANKRD11Q6UB99 2663 aaPredicted RBP12.84□□□□□ -0.35
BRF1-212ENST00000547562 LY86O95711 162 aa12.84□□□□□ -0.35
BRF1-212ENST00000547562 IGHV1-46P01743 117 aa12.84□□□□□ -0.35
BRF1-212ENST00000547562 PLA2G5P39877 138 aa12.84□□□□□ -0.35
BRF1-212ENST00000547562 TNFAIP6P98066 277 aaPredicted RBP12.84□□□□□ -0.35
BRF1-212ENST00000547562 ZNF343Q6P1L6 599 aa12.84□□□□□ -0.35
BRF1-212ENST00000547562 OR4A16Q8NH70 328 aa12.84□□□□□ -0.35
BRF1-212ENST00000547562 Q8WTZ3 238 aa12.84□□□□□ -0.35
BRF1-212ENST00000547562 DYSFO75923 2080 aa12.84□□□□□ -0.35
BRF1-212ENST00000547562 ZGRF1Q86YA3 2104 aa12.84□□□□□ -0.35
BRF1-212ENST00000547562 ITGB1BP1O14713 200 aa12.83□□□□□ -0.35
BRF1-212ENST00000547562 SLC31A2O15432 143 aa12.83□□□□□ -0.35
BRF1-212ENST00000547562 IGHV2-5P01817 119 aa12.83□□□□□ -0.35
BRF1-212ENST00000547562 CD40P25942 277 aa12.83□□□□□ -0.35
BRF1-212ENST00000547562 MEOX2P50222 304 aa12.83□□□□□ -0.35
BRF1-212ENST00000547562 RAB7AP51149 207 aa12.83□□□□□ -0.35
BRF1-212ENST00000547562 ERVFRD-1P60508 538 aa12.83□□□□□ -0.35
BRF1-212ENST00000547562 SPCS3P61009 180 aa12.83□□□□□ -0.35
BRF1-212ENST00000547562 ERVK-16P61578 105 aa12.83□□□□□ -0.35
BRF1-212ENST00000547562 ZNF709Q8N972 641 aa12.83□□□□□ -0.35
BRF1-212ENST00000547562 SDSLQ96GA7 329 aa12.83□□□□□ -0.35
BRF1-212ENST00000547562 S1PR3Q99500 378 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms