RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 CHRNA7P36544 502 aa12.4□□□□□ -0.42
DDX54-204ENST00000546898 TAS2R20P59543 309 aa12.4□□□□□ -0.42
DDX54-204ENST00000546898 OVCH2Q7RTZ1 564 aa12.4□□□□□ -0.42
DDX54-204ENST00000546898 OR5M8Q8NGP6 311 aa12.4□□□□□ -0.42
DDX54-204ENST00000546898 ARPC1AQ92747 370 aa12.4□□□□□ -0.42
DDX54-204ENST00000546898 SNAPC3Q92966 411 aa12.4□□□□□ -0.42
DDX54-204ENST00000546898 RAX2Q96IS3 184 aa12.4□□□□□ -0.42
DDX54-204ENST00000546898 MCRIP2Q9BUT9 160 aaKnown RBP12.4□□□□□ -0.42
DDX54-204ENST00000546898 IFT46Q9NQC8 304 aa12.4□□□□□ -0.42
DDX54-204ENST00000546898 TPSG1Q9NRR2 321 aa12.4□□□□□ -0.42
DDX54-204ENST00000546898 VSIG4Q9Y279 399 aa12.4□□□□□ -0.42
DDX54-204ENST00000546898 MRPS7Q9Y2R9 242 aaKnown RBP12.4□□□□□ -0.42
DDX54-204ENST00000546898 PRELID3BQ9Y3B1 194 aa12.4□□□□□ -0.42
DDX54-204ENST00000546898 TNCP24821 2201 aa12.39□□□□□ -0.43
DDX54-204ENST00000546898 DNAH3Q8TD57 4116 aa12.39□□□□□ -0.43
DDX54-204ENST00000546898 PRKDCP78527 4128 aaKnown RBP12.39□□□□□ -0.43
DDX54-204ENST00000546898 J3QRK9 145 aa12.39□□□□□ -0.43
DDX54-204ENST00000546898 CCL24O00175 119 aa12.39□□□□□ -0.43
DDX54-204ENST00000546898 CRYZL1O95825 349 aa12.39□□□□□ -0.43
DDX54-204ENST00000546898 IGLV2-14P01704 120 aa12.39□□□□□ -0.43
DDX54-204ENST00000546898 APOA1P02647 267 aa12.39□□□□□ -0.43
DDX54-204ENST00000546898 EGR2P11161 476 aaPredicted RBP12.39□□□□□ -0.43
DDX54-204ENST00000546898 PTHLHP12272 177 aa12.39□□□□□ -0.43
DDX54-204ENST00000546898 RAB9AP51151 201 aa12.39□□□□□ -0.43
DDX54-204ENST00000546898 RUNX1Q01196 453 aa12.39□□□□□ -0.43
DDX54-204ENST00000546898 VMA21Q3ZAQ7 101 aa12.39□□□□□ -0.43
DDX54-204ENST00000546898 ZNF491Q8N8L2 437 aa12.39□□□□□ -0.43
DDX54-204ENST00000546898 OR5AP2Q8NGF4 316 aa12.39□□□□□ -0.43
DDX54-204ENST00000546898 HSD17B10Q99714 261 aaKnown RBP12.39□□□□□ -0.43
DDX54-204ENST00000546898 COMMD3Q9UBI1 195 aa12.39□□□□□ -0.43
DDX54-204ENST00000546898 ANAPC10Q9UM13 185 aa12.39□□□□□ -0.43
DDX54-204ENST00000546898 A3GALT2U3KPV4 340 aa12.39□□□□□ -0.43
DDX54-204ENST00000546898 SOX15O60248 233 aa12.38□□□□□ -0.43
DDX54-204ENST00000546898 EIF4EP06730 217 aaKnown RBP12.38□□□□□ -0.43
DDX54-204ENST00000546898 FCGR2CP31995 323 aa12.38□□□□□ -0.43
DDX54-204ENST00000546898 RORCP51449 518 aa12.38□□□□□ -0.43
DDX54-204ENST00000546898 UBE2KP61086 200 aa12.38□□□□□ -0.43
DDX54-204ENST00000546898 FHL3Q13643 280 aa12.38□□□□□ -0.43
DDX54-204ENST00000546898 KIAA0141Q14154 515 aaPredicted RBP12.38□□□□□ -0.43
DDX54-204ENST00000546898 FXYD3Q14802 87 aa12.38□□□□□ -0.43
DDX54-204ENST00000546898 CDK10Q15131 360 aa12.38□□□□□ -0.43
DDX54-204ENST00000546898 CTF1Q16619 201 aa12.38□□□□□ -0.43
DDX54-204ENST00000546898 DEFB136Q30KP8 78 aa12.38□□□□□ -0.43
DDX54-204ENST00000546898 ACTBL2Q562R1 376 aa12.38□□□□□ -0.43
DDX54-204ENST00000546898 FOXB2Q5VYV0 432 aa12.38□□□□□ -0.43
DDX54-204ENST00000546898 UNQ5815/PRO19632Q6UWF5 114 aa12.38□□□□□ -0.43
DDX54-204ENST00000546898 ZNF66Q6ZN08 573 aa12.38□□□□□ -0.43
DDX54-204ENST00000546898 TEX45Q8NA69 505 aa12.38□□□□□ -0.43
DDX54-204ENST00000546898 LFNGQ8NES3 379 aa12.38□□□□□ -0.43
DDX54-204ENST00000546898 AP3S1Q92572 193 aa12.38□□□□□ -0.43
DDX54-204ENST00000546898 FAM103A1Q9BTL3 118 aaKnown RBP12.38□□□□□ -0.43
DDX54-204ENST00000546898 NAA50Q9GZZ1 169 aaKnown RBP12.38□□□□□ -0.43
DDX54-204ENST00000546898 KLK15Q9H2R5 256 aa12.38□□□□□ -0.43
DDX54-204ENST00000546898 SMIM31A0A1B0GVY4 71 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 SRRM4A7MD48 611 aaKnown RBP12.37□□□□□ -0.43
DDX54-204ENST00000546898 ARPC1BO15143 372 aaKnown RBP12.37□□□□□ -0.43
DDX54-204ENST00000546898 CREBL2O60519 120 aaPredicted RBP12.37□□□□□ -0.43
DDX54-204ENST00000546898 FCGR3BO75015 233 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 CNIH1O95406 144 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 PPYP01298 95 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 AADACP22760 399 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 CD40LGP29965 261 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 PRSS3P35030 304 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 ALDH3B2P48448 385 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 SSBP2P81877 361 aaPredicted RBP12.37□□□□□ -0.43
DDX54-204ENST00000546898 EIF4EBP1Q13541 118 aaPredicted RBP12.37□□□□□ -0.43
DDX54-204ENST00000546898 GPR107Q5VW38 600 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 GPR141Q7Z602 305 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 ZBTB34Q8NCN2 500 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 OR4S2Q8NH73 311 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 GRPEL2Q8TAA5 225 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 DPF1Q92782 380 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 TMEM68Q96MH6 324 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 DUX3Q96PT4 197 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 SLA2Q9H6Q3 261 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 GNB4Q9HAV0 340 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 TGP01266 2768 aa12.37□□□□□ -0.43
DDX54-204ENST00000546898 MEIS3P1A6NDR6 274 aa12.36□□□□□ -0.43
DDX54-204ENST00000546898 H3BUA1 57 aa12.36□□□□□ -0.43
DDX54-204ENST00000546898 I3L521 148 aa12.36□□□□□ -0.43
DDX54-204ENST00000546898 NAT1P18440 290 aa12.36□□□□□ -0.43
DDX54-204ENST00000546898 KIR2DS2P43631 304 aa12.36□□□□□ -0.43
DDX54-204ENST00000546898 TAS2R46P59540 309 aa12.36□□□□□ -0.43
DDX54-204ENST00000546898 GNB1P62873 340 aa12.36□□□□□ -0.43
DDX54-204ENST00000546898 RPL30P62888 115 aaKnown RBP12.36□□□□□ -0.43
DDX54-204ENST00000546898 MZT2AQ6P582 158 aa12.36□□□□□ -0.43
DDX54-204ENST00000546898 SECTM1Q8WVN6 248 aa12.36□□□□□ -0.43
DDX54-204ENST00000546898 TCTEX1D2Q8WW35 142 aa12.36□□□□□ -0.43
DDX54-204ENST00000546898 GIMAP1Q8WWP7 306 aa12.36□□□□□ -0.43
DDX54-204ENST00000546898 BORCS5Q969J3 196 aa12.36□□□□□ -0.43
DDX54-204ENST00000546898 SCPEP1Q9HB40 452 aa12.36□□□□□ -0.43
DDX54-204ENST00000546898 FCER2P06734 321 aa12.35□□□□□ -0.43
DDX54-204ENST00000546898 OR8U8P0C7N1 319 aa12.35□□□□□ -0.43
DDX54-204ENST00000546898 ZNF182P17025 639 aaPredicted RBP12.35□□□□□ -0.43
DDX54-204ENST00000546898 RAB25P57735 213 aa12.35□□□□□ -0.43
DDX54-204ENST00000546898 PJVKQ0ZLH3 352 aa12.35□□□□□ -0.43
DDX54-204ENST00000546898 MFSD4AQ8N468 514 aa12.35□□□□□ -0.43
DDX54-204ENST00000546898 OR11H1Q8NG94 326 aa12.35□□□□□ -0.43
DDX54-204ENST00000546898 DCUN1D5Q9BTE7 237 aa12.35□□□□□ -0.43
DDX54-204ENST00000546898 CCL28Q9NRJ3 127 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms