RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 MEF2DQ14814 521 aa11.44□□□□□ -0.58
DDX54-203ENST00000546869 C9orf152Q5JTZ5 239 aa11.44□□□□□ -0.58
DDX54-203ENST00000546869 LINC00299Q6ZSB3 139 aa11.44□□□□□ -0.58
DDX54-203ENST00000546869 KCTD9Q7L273 389 aa11.44□□□□□ -0.58
DDX54-203ENST00000546869 LHFPL1Q86WI0 220 aa11.44□□□□□ -0.58
DDX54-203ENST00000546869 FOXRED2Q8IWF2 684 aa11.44□□□□□ -0.58
DDX54-203ENST00000546869 CHPT1Q8WUD6 406 aa11.44□□□□□ -0.58
DDX54-203ENST00000546869 RBMXL1Q96E39 390 aaKnown RBP11.44□□□□□ -0.58
DDX54-203ENST00000546869 GON7Q9BXV9 100 aa11.44□□□□□ -0.58
DDX54-203ENST00000546869 BATF3Q9NR55 127 aa11.44□□□□□ -0.58
DDX54-203ENST00000546869 AP4M1O00189 453 aa11.43□□□□□ -0.58
DDX54-203ENST00000546869 RBFOX2O43251 390 aaKnown RBP eCLIP11.43□□□□□ -0.58
DDX54-203ENST00000546869 CRYGBP07316 175 aa11.43□□□□□ -0.58
DDX54-203ENST00000546869 VSIG10L2P0DP72 767 aa11.43□□□□□ -0.58
DDX54-203ENST00000546869 BRWD1-AS2P59051 145 aa11.43□□□□□ -0.58
DDX54-203ENST00000546869 RNASE12Q5GAN4 147 aaKnown RBP11.43□□□□□ -0.58
DDX54-203ENST00000546869 SPANXN2Q5MJ10 180 aa11.43□□□□□ -0.58
DDX54-203ENST00000546869 AADACL3Q5VUY0 350 aa11.43□□□□□ -0.58
DDX54-203ENST00000546869 STEAP1BQ6NZ63 245 aa11.43□□□□□ -0.58
DDX54-203ENST00000546869 CMTM1Q8IZ96 169 aa11.43□□□□□ -0.58
DDX54-203ENST00000546869 TCTEX1D1Q8N7M0 179 aa11.43□□□□□ -0.58
DDX54-203ENST00000546869 DEDD2Q8WXF8 326 aa11.43□□□□□ -0.58
DDX54-203ENST00000546869 THAP7Q9BT49 309 aaPredicted RBP11.43□□□□□ -0.58
DDX54-203ENST00000546869 RSRP1Q9BUV0 290 aa11.43□□□□□ -0.58
DDX54-203ENST00000546869 TINAGL1Q9GZM7 467 aaPredicted RBP11.43□□□□□ -0.58
DDX54-203ENST00000546869 IGHV7-81A0A0B4J1V7 117 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 ANKRD20A5PA0PJZ0 165 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 LINC01548A6NM66 108 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 SRRM4A7MD48 611 aaKnown RBP11.42□□□□□ -0.58
DDX54-203ENST00000546869 M0QYG6 137 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 GPR31O00270 319 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 FCGR3BO75015 233 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 RAB3DO95716 219 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 CRIP2P52943 208 aaPredicted RBP11.42□□□□□ -0.58
DDX54-203ENST00000546869 CATR1Q13166 79 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 TMEM95Q3KNT9 176 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 ZNF562Q6V9R5 426 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 CENPVQ7Z7K6 275 aaPredicted RBP11.42□□□□□ -0.58
DDX54-203ENST00000546869 SLC38A6Q8IZM9 456 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 STPG2Q8N412 459 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 TEX45Q8NA69 505 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 OR4S2Q8NH73 311 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 TERB2Q8NHR7 220 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 SGMS2Q8NHU3 365 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 CD300LFQ8TDQ1 290 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 TCTEX1D2Q8WW35 142 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 ZNF486Q96H40 463 aaPredicted RBP11.42□□□□□ -0.58
DDX54-203ENST00000546869 HSPB9Q9BQS6 159 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 FXYD6Q9H0Q3 95 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 OR51J1Q9H342 316 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 FBXL15Q9H469 300 aa11.42□□□□□ -0.58
DDX54-203ENST00000546869 METTL1Q9UBP6 276 aaKnown RBP11.42□□□□□ -0.58
DDX54-203ENST00000546869 SHOXO15266 292 aa11.41□□□□□ -0.58
DDX54-203ENST00000546869 PGLYRP1O75594 196 aaPredicted RBP11.41□□□□□ -0.58
DDX54-203ENST00000546869 ZNF735P0CB33 412 aa11.41□□□□□ -0.58
DDX54-203ENST00000546869 AKAIN1P0CW23 69 aa11.41□□□□□ -0.58
DDX54-203ENST00000546869 UBE2KP61086 200 aa11.41□□□□□ -0.58
DDX54-203ENST00000546869 SRSF4Q08170 494 aaKnown RBP11.41□□□□□ -0.58
DDX54-203ENST00000546869 ZNF79Q15937 498 aa11.41□□□□□ -0.58
DDX54-203ENST00000546869 PPP1R27Q86WC6 154 aa11.41□□□□□ -0.58
DDX54-203ENST00000546869 Q8N402 240 aa11.41□□□□□ -0.58
DDX54-203ENST00000546869 COMMD1Q8N668 190 aa11.41□□□□□ -0.58
DDX54-203ENST00000546869 OR5AU1Q8NGC0 362 aa11.41□□□□□ -0.58
DDX54-203ENST00000546869 OR4D10Q8NGI6 311 aa11.41□□□□□ -0.58
DDX54-203ENST00000546869 HARBI1Q96MB7 349 aa11.41□□□□□ -0.58
DDX54-203ENST00000546869 AIFM2Q9BRQ8 373 aa11.41□□□□□ -0.58
DDX54-203ENST00000546869 FAM212BQ9NTI7 297 aaPredicted RBP11.41□□□□□ -0.58
DDX54-203ENST00000546869 DISC1C4P0D8 188 aa11.4□□□□□ -0.58
DDX54-203ENST00000546869 FCN1O00602 326 aa11.4□□□□□ -0.58
DDX54-203ENST00000546869 TNFSF12O43508 249 aa11.4□□□□□ -0.58
DDX54-203ENST00000546869 CRYZL1O95825 349 aa11.4□□□□□ -0.58
DDX54-203ENST00000546869 HPRT1P00492 218 aa11.4□□□□□ -0.58
DDX54-203ENST00000546869 S100GP29377 79 aa11.4□□□□□ -0.58
DDX54-203ENST00000546869 ECI1P42126 302 aa11.4□□□□□ -0.58
DDX54-203ENST00000546869 SLC35B1P78383 322 aa11.4□□□□□ -0.58
DDX54-203ENST00000546869 CX3CL1P78423 397 aa11.4□□□□□ -0.58
DDX54-203ENST00000546869 CD83Q01151 205 aa11.4□□□□□ -0.58
DDX54-203ENST00000546869 PLGLAQ15195 96 aa11.4□□□□□ -0.58
DDX54-203ENST00000546869 SURF2Q15527 256 aaPredicted RBP11.4□□□□□ -0.58
DDX54-203ENST00000546869 VMA21Q3ZAQ7 101 aa11.4□□□□□ -0.58
DDX54-203ENST00000546869 PYDC2Q56P42 97 aa11.4□□□□□ -0.58
DDX54-203ENST00000546869 CADM3Q8N126 398 aa11.4□□□□□ -0.58
DDX54-203ENST00000546869 GDPD1Q8N9F7 314 aa11.4□□□□□ -0.58
DDX54-203ENST00000546869 SLC2A8Q9NY64 477 aa11.4□□□□□ -0.58
DDX54-203ENST00000546869 DNHD1Q96M86 4753 aa11.4□□□□□ -0.58
DDX54-203ENST00000546869 ANK2Q01484 3957 aa11.4□□□□□ -0.59
DDX54-203ENST00000546869 PSMB11A5LHX3 300 aa11.39□□□□□ -0.59
DDX54-203ENST00000546869 SLC25A17O43808 307 aa11.39□□□□□ -0.59
DDX54-203ENST00000546869 FBXO24O75426 580 aa11.39□□□□□ -0.59
DDX54-203ENST00000546869 HRASP01112 189 aa11.39□□□□□ -0.59
DDX54-203ENST00000546869 F2RP25116 425 aa11.39□□□□□ -0.59
DDX54-203ENST00000546869 AP3S2P59780 193 aa11.39□□□□□ -0.59
DDX54-203ENST00000546869 RND3P61587 244 aa11.39□□□□□ -0.59
DDX54-203ENST00000546869 ZNF45Q02386 682 aa11.39□□□□□ -0.59
DDX54-203ENST00000546869 CFHR3Q02985 330 aa11.39□□□□□ -0.59
DDX54-203ENST00000546869 SPAG16Q8N0X2 631 aa11.39□□□□□ -0.59
DDX54-203ENST00000546869 POC5Q8NA72 575 aa11.39□□□□□ -0.59
DDX54-203ENST00000546869 OR4C16Q8NGL9 310 aa11.39□□□□□ -0.59
DDX54-203ENST00000546869 VSTM2AQ8TAG5 236 aa11.39□□□□□ -0.59
DDX54-203ENST00000546869 ZFAND1Q8TCF1 268 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms