RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 GIMAP1Q8WWP7 306 aa9.28□□□□□ -0.92
YBX3-217ENST00000546164 HARBI1Q96MB7 349 aa9.28□□□□□ -0.92
YBX3-217ENST00000546164 HSD17B10Q99714 261 aaKnown RBP9.28□□□□□ -0.92
YBX3-217ENST00000546164 BCL7BQ9BQE9 202 aa9.28□□□□□ -0.92
YBX3-217ENST00000546164 FBXO7Q9Y3I1 522 aa9.28□□□□□ -0.92
YBX3-217ENST00000546164 NUBP2Q9Y5Y2 271 aa9.28□□□□□ -0.92
YBX3-217ENST00000546164 WSB1Q9Y6I7 421 aa9.28□□□□□ -0.92
YBX3-217ENST00000546164 SMIM31A0A1B0GVY4 71 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 SRRM4A7MD48 611 aaKnown RBP9.27□□□□□ -0.93
YBX3-217ENST00000546164 G3V4G9 280 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 J3QRK9 145 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 SHOXO15266 292 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 WIPF1O43516 503 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 CA2P00918 260 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 PPYP01298 95 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 ELK1P19419 428 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 AADACP22760 399 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 PRSS3P35030 304 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 MYCNOSP40205 109 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 TMEM267Q0VDI3 215 aaPredicted RBP9.27□□□□□ -0.93
YBX3-217ENST00000546164 CDK10Q15131 360 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 AKIRIN2Q53H80 203 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 MZT2AQ6P582 158 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 ZNF66Q6ZN08 573 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 LCNL1Q6ZST4 164 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 C18orf65Q6ZTR6 163 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 C8orf86Q6ZUL3 223 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 KCTD9Q7L273 389 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 LINC00482Q8N8I6 264 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 ZBTB34Q8NCN2 500 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 KLHL30-AS1Q8NEE0 82 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 OSR1Q8TAX0 266 aaPredicted RBP9.27□□□□□ -0.93
YBX3-217ENST00000546164 GPX8Q8TED1 209 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 P2RX4Q99571 388 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 SCPEP1Q9HB40 452 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 IFT46Q9NQC8 304 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 TPSG1Q9NRR2 321 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 ADAM30Q9UKF2 790 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 FOXA2Q9Y261 457 aaPredicted RBP9.27□□□□□ -0.93
YBX3-217ENST00000546164 PRELID3BQ9Y3B1 194 aa9.27□□□□□ -0.93
YBX3-217ENST00000546164 MEIS3P1A6NDR6 274 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 NUDT19A8MXV4 375 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 SOX15O60248 233 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 HPGDSO60760 199 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 TPPPO94811 219 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 CRYZL1O95825 349 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 CD33P20138 364 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 RPL5P46777 297 aaKnown RBP9.26□□□□□ -0.93
YBX3-217ENST00000546164 TMBIM6P55061 237 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 TAS2R46P59540 309 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 UBE2KP61086 200 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 RPL30P62888 115 aaKnown RBP9.26□□□□□ -0.93
YBX3-217ENST00000546164 SSBP2P81877 361 aaPredicted RBP9.26□□□□□ -0.93
YBX3-217ENST00000546164 DYRK1AQ13627 763 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 KIAA0141Q14154 515 aaPredicted RBP9.26□□□□□ -0.93
YBX3-217ENST00000546164 ECSCRQ19T08 205 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 DHRS11Q6UWP2 260 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 C1QL4Q86Z23 238 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 MRPL41Q8IXM3 137 aaKnown RBP9.26□□□□□ -0.93
YBX3-217ENST00000546164 TEX45Q8NA69 505 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 RAB2BQ8WUD1 216 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 C4orf3Q8WVX3 66 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 ARPC1AQ92747 370 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 RCC1LQ96I51 464 aaKnown RBP9.26□□□□□ -0.93
YBX3-217ENST00000546164 UBE2E2Q96LR5 201 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 KLK15Q9H2R5 256 aa9.26□□□□□ -0.93
YBX3-217ENST00000546164 MRPS7Q9Y2R9 242 aaKnown RBP9.26□□□□□ -0.93
YBX3-217ENST00000546164 TNCP24821 2201 aa9.25□□□□□ -0.93
YBX3-217ENST00000546164 SULT1C2O00338 296 aa9.25□□□□□ -0.93
YBX3-217ENST00000546164 ARPC1BO15143 372 aaKnown RBP9.25□□□□□ -0.93
YBX3-217ENST00000546164 DUS4LO95620 317 aaKnown RBP9.25□□□□□ -0.93
YBX3-217ENST00000546164 FCER2P06734 321 aa9.25□□□□□ -0.93
YBX3-217ENST00000546164 RAB9AP51151 201 aa9.25□□□□□ -0.93
YBX3-217ENST00000546164 RUNX1Q01196 453 aa9.25□□□□□ -0.93
YBX3-217ENST00000546164 FXYD3Q14802 87 aa9.25□□□□□ -0.93
YBX3-217ENST00000546164 MRGPRG-AS1Q2M3A8 158 aa9.25□□□□□ -0.93
YBX3-217ENST00000546164 VMA21Q3ZAQ7 101 aa9.25□□□□□ -0.93
YBX3-217ENST00000546164 OXLD1Q5BKU9 147 aa9.25□□□□□ -0.93
YBX3-217ENST00000546164 PYHIN1Q6K0P9 492 aa9.25□□□□□ -0.93
YBX3-217ENST00000546164 TMEM65Q6PI78 240 aa9.25□□□□□ -0.93
YBX3-217ENST00000546164 CLVS1Q8IUQ0 354 aaPredicted RBP9.25□□□□□ -0.93
YBX3-217ENST00000546164 MFSD4AQ8N468 514 aa9.25□□□□□ -0.93
YBX3-217ENST00000546164 ZNF491Q8N8L2 437 aa9.25□□□□□ -0.93
YBX3-217ENST00000546164 OR5M8Q8NGP6 311 aa9.25□□□□□ -0.93
YBX3-217ENST00000546164 RAX2Q96IS3 184 aa9.25□□□□□ -0.93
YBX3-217ENST00000546164 TMEM68Q96MH6 324 aa9.25□□□□□ -0.93
YBX3-217ENST00000546164 CLCC1Q96S66 551 aa9.25□□□□□ -0.93
YBX3-217ENST00000546164 CCL28Q9NRJ3 127 aa9.25□□□□□ -0.93
YBX3-217ENST00000546164 A0A1W2PN81 502 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 CCL24O00175 119 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 RBFOX2O43251 390 aaKnown RBP eCLIP9.24□□□□□ -0.93
YBX3-217ENST00000546164 FCGR3BO75015 233 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 CHRNA7P36544 502 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 KIR2DS2P43631 304 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 BRWD1-AS2P59051 145 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 PJVKQ0ZLH3 352 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 FHL3Q13643 280 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 SPCS2Q15005 226 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 PRSS8Q16651 343 aa9.24□□□□□ -0.93
YBX3-217ENST00000546164 PDLIM3Q53GG5 364 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms