RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 PITPNAQ00169 270 aa15.35■□□□□ 0.05
CHD4-213ENST00000545584 CDNFQ49AH0 187 aa15.35■□□□□ 0.05
CHD4-213ENST00000545584 TMEM177Q53S58 311 aa15.35■□□□□ 0.05
CHD4-213ENST00000545584 NR2C2APQ86WQ0 139 aa15.35■□□□□ 0.05
CHD4-213ENST00000545584 H1FOOQ8IZA3 346 aaPredicted RBP15.35■□□□□ 0.05
CHD4-213ENST00000545584 OR5T1Q8NG75 326 aa15.35■□□□□ 0.05
CHD4-213ENST00000545584 OR6Q1Q8NGQ2 317 aa15.35■□□□□ 0.05
CHD4-213ENST00000545584 SMAD5-AS1Q9Y6J3 95 aa15.35■□□□□ 0.05
CHD4-213ENST00000545584 SORL1Q92673 2214 aa15.34■□□□□ 0.05
CHD4-213ENST00000545584 A0A0G2JLM5 398 aa15.34■□□□□ 0.05
CHD4-213ENST00000545584 CTXN2P0C2S0 81 aa15.34■□□□□ 0.05
CHD4-213ENST00000545584 VMA21Q3ZAQ7 101 aa15.34■□□□□ 0.05
CHD4-213ENST00000545584 OR4C12Q96R67 309 aa15.34■□□□□ 0.05
CHD4-213ENST00000545584 ST6GALNAC5Q9BVH7 336 aa15.34■□□□□ 0.05
CHD4-213ENST00000545584 DAPK2Q9UIK4 370 aa15.34■□□□□ 0.05
CHD4-213ENST00000545584 U3KQK5 164 aa15.34■□□□□ 0.05
CHD4-213ENST00000545584 CRYGBP07316 175 aa15.33■□□□□ 0.04
CHD4-213ENST00000545584 PJVKQ0ZLH3 352 aa15.33■□□□□ 0.04
CHD4-213ENST00000545584 HACD4Q5VWC8 232 aa15.33■□□□□ 0.04
CHD4-213ENST00000545584 ACSM6Q6P461 480 aa15.33■□□□□ 0.04
CHD4-213ENST00000545584 C5orf30Q96GV9 206 aa15.33■□□□□ 0.04
CHD4-213ENST00000545584 ELOVL1Q9BW60 279 aa15.33■□□□□ 0.04
CHD4-213ENST00000545584 DCSTAMPQ9H295 470 aa15.33■□□□□ 0.04
CHD4-213ENST00000545584 RANGRFQ9HD47 186 aaPredicted RBP15.33■□□□□ 0.04
CHD4-213ENST00000545584 ELF5Q9UKW6 265 aaPredicted RBP15.33■□□□□ 0.04
CHD4-213ENST00000545584 RRP15Q9Y3B9 282 aaKnown RBP15.33■□□□□ 0.04
CHD4-213ENST00000545584 COL7A1Q02388 2944 aa15.32■□□□□ 0.04
CHD4-213ENST00000545584 IGKV1D-8A0A087WSZ0 117 aa15.32■□□□□ 0.04
CHD4-213ENST00000545584 CRYZL1O95825 349 aa15.32■□□□□ 0.04
CHD4-213ENST00000545584 ZP3P21754 424 aa15.32■□□□□ 0.04
CHD4-213ENST00000545584 DUTP33316 252 aaKnown RBP15.32■□□□□ 0.04
CHD4-213ENST00000545584 GNG2P59768 71 aa15.32■□□□□ 0.04
CHD4-213ENST00000545584 TEX45Q8NA69 505 aa15.32■□□□□ 0.04
CHD4-213ENST00000545584 PHB2Q99623 299 aa15.32■□□□□ 0.04
CHD4-213ENST00000545584 SRRM4A7MD48 611 aaKnown RBP15.31■□□□□ 0.04
CHD4-213ENST00000545584 J3QRK9 145 aa15.31■□□□□ 0.04
CHD4-213ENST00000545584 UBE2KP61086 200 aa15.31■□□□□ 0.04
CHD4-213ENST00000545584 SSBP2P81877 361 aaPredicted RBP15.31■□□□□ 0.04
CHD4-213ENST00000545584 SFXN4Q6P4A7 337 aa15.31■□□□□ 0.04
CHD4-213ENST00000545584 ZNF645Q8N7E2 425 aa15.31■□□□□ 0.04
CHD4-213ENST00000545584 OSR1Q8TAX0 266 aaPredicted RBP15.31■□□□□ 0.04
CHD4-213ENST00000545584 DDB2Q92466 427 aa15.31■□□□□ 0.04
CHD4-213ENST00000545584 ASCL2Q99929 193 aa15.31■□□□□ 0.04
CHD4-213ENST00000545584 OR2W1Q9Y3N9 320 aa15.31■□□□□ 0.04
CHD4-213ENST00000545584 CREBL2O60519 120 aaPredicted RBP15.3■□□□□ 0.04
CHD4-213ENST00000545584 SLC22A5O76082 557 aa15.3■□□□□ 0.04
CHD4-213ENST00000545584 GP9P14770 177 aa15.3■□□□□ 0.04
CHD4-213ENST00000545584 SPNP16150 400 aa15.3■□□□□ 0.04
CHD4-213ENST00000545584 CD36P16671 472 aa15.3■□□□□ 0.04
CHD4-213ENST00000545584 AADACP22760 399 aa15.3■□□□□ 0.04
CHD4-213ENST00000545584 TNXAQ16473 311 aa15.3■□□□□ 0.04
CHD4-213ENST00000545584 CNIH2Q6PI25 160 aa15.3■□□□□ 0.04
CHD4-213ENST00000545584 ZNF773Q6PK81 442 aa15.3■□□□□ 0.04
CHD4-213ENST00000545584 LGALS14Q8TCE9 139 aa15.3■□□□□ 0.04
CHD4-213ENST00000545584 NUDCD2Q8WVJ2 157 aa15.3■□□□□ 0.04
CHD4-213ENST00000545584 DCUN1D5Q9BTE7 237 aa15.3■□□□□ 0.04
CHD4-213ENST00000545584 COA4Q9NYJ1 87 aa15.3■□□□□ 0.04
CHD4-213ENST00000545584 PRELID3BQ9Y3B1 194 aa15.3■□□□□ 0.04
CHD4-213ENST00000545584 TMEM235A6NFC5 223 aa15.29■□□□□ 0.04
CHD4-213ENST00000545584 LINC00473A8K010 186 aa15.29■□□□□ 0.04
CHD4-213ENST00000545584 MPPED1O15442 326 aa15.29■□□□□ 0.04
CHD4-213ENST00000545584 ACTL6BO94805 426 aa15.29■□□□□ 0.04
CHD4-213ENST00000545584 BRI3O95415 125 aa15.29■□□□□ 0.04
CHD4-213ENST00000545584 NFYAP23511 347 aaPredicted RBP15.29■□□□□ 0.04
CHD4-213ENST00000545584 PRSS8Q16651 343 aa15.29■□□□□ 0.04
CHD4-213ENST00000545584 ACOT12Q8WYK0 555 aa15.29■□□□□ 0.04
CHD4-213ENST00000545584 TINAGL1Q9GZM7 467 aaPredicted RBP15.29■□□□□ 0.04
CHD4-213ENST00000545584 OR51E2Q9H255 320 aa15.29■□□□□ 0.04
CHD4-213ENST00000545584 MRPS7Q9Y2R9 242 aaKnown RBP15.29■□□□□ 0.04
CHD4-213ENST00000545584 ANKRD34BA5PLL1 514 aa15.28■□□□□ 0.04
CHD4-213ENST00000545584 MSGN1A6NI15 193 aa15.28■□□□□ 0.04
CHD4-213ENST00000545584 SDC2P34741 201 aa15.28■□□□□ 0.04
CHD4-213ENST00000545584 SCAND1P57086 179 aa15.28■□□□□ 0.04
CHD4-213ENST00000545584 MXD1Q05195 221 aa15.28■□□□□ 0.04
CHD4-213ENST00000545584 KCTD9Q7L273 389 aa15.28■□□□□ 0.04
CHD4-213ENST00000545584 ANKRD13BQ86YJ7 626 aa15.28■□□□□ 0.04
CHD4-213ENST00000545584 USMG5Q96IX5 58 aa15.28■□□□□ 0.04
CHD4-213ENST00000545584 RSRP1Q9BUV0 290 aa15.28■□□□□ 0.04
CHD4-213ENST00000545584 RHBDL2Q9NX52 303 aa15.28■□□□□ 0.04
CHD4-213ENST00000545584 FCGR3BO75015 233 aa15.27■□□□□ 0.04
CHD4-213ENST00000545584 TUSC2O75896 110 aa15.27■□□□□ 0.04
CHD4-213ENST00000545584 HLA-DQB1P01920 261 aa15.27■□□□□ 0.04
CHD4-213ENST00000545584 APELAP0DMC3 54 aa15.27■□□□□ 0.04
CHD4-213ENST00000545584 IDO2Q6ZQW0 420 aa15.27■□□□□ 0.04
CHD4-213ENST00000545584 SRSF12Q8WXF0 261 aaKnown RBP15.27■□□□□ 0.04
CHD4-213ENST00000545584 ANXA10Q9UJ72 324 aa15.27■□□□□ 0.04
CHD4-213ENST00000545584 RBMX2Q9Y388 322 aaKnown RBP15.27■□□□□ 0.04
CHD4-213ENST00000545584 ETV7Q9Y603 341 aa15.27■□□□□ 0.04
CHD4-213ENST00000545584 LOC100506127A0A0U1RQW1 187 aa15.26■□□□□ 0.03
CHD4-213ENST00000545584 OR9G9P0C7N8 305 aa15.26■□□□□ 0.03
CHD4-213ENST00000545584 CDK10Q15131 360 aa15.26■□□□□ 0.03
CHD4-213ENST00000545584 TATDN3Q17R31 274 aa15.26■□□□□ 0.03
CHD4-213ENST00000545584 IDNKQ5T6J7 187 aa15.26■□□□□ 0.03
CHD4-213ENST00000545584 MMD2Q8IY49 270 aa15.26■□□□□ 0.03
CHD4-213ENST00000545584 PEF1Q9UBV8 284 aaKnown RBP15.26■□□□□ 0.03
CHD4-213ENST00000545584 DNAH9Q9NYC9 4486 aa15.25■□□□□ 0.03
CHD4-213ENST00000545584 SAA1P0DJI8 122 aaPredicted RBP15.25■□□□□ 0.03
CHD4-213ENST00000545584 NEDD8Q15843 81 aa15.25■□□□□ 0.03
CHD4-213ENST00000545584 MRGPRG-AS1Q2M3A8 158 aa15.25■□□□□ 0.03
CHD4-213ENST00000545584 OR2B11Q5JQS5 317 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms