RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 RPL31P62899 125 aaKnown RBP16.8■□□□□ 0.28
HDAC4-215ENST00000543185 SAPCD1Q5SSQ6 148 aa16.8■□□□□ 0.28
HDAC4-215ENST00000543185 WDR54Q9H977 334 aa16.8■□□□□ 0.28
HDAC4-215ENST00000543185 GLI3P10071 1580 aa16.8■□□□□ 0.28
HDAC4-215ENST00000543185 NGFRP08138 427 aa16.8■□□□□ 0.28
HDAC4-215ENST00000543185 IFI6P09912 130 aa16.8■□□□□ 0.28
HDAC4-215ENST00000543185 TNFRSF9Q07011 255 aa16.8■□□□□ 0.28
HDAC4-215ENST00000543185 CA1P00915 261 aaPredicted RBP16.8■□□□□ 0.28
HDAC4-215ENST00000543185 ANOS1P23352 680 aa16.8■□□□□ 0.28
HDAC4-215ENST00000543185 F11RQ9Y624 299 aaKnown RBP16.8■□□□□ 0.28
HDAC4-215ENST00000543185 OR4C13Q8NGP0 309 aa16.79■□□□□ 0.28
HDAC4-215ENST00000543185 COX14Q96I36 57 aa16.79■□□□□ 0.28
HDAC4-215ENST00000543185 A0A1B0GWB2 263 aa16.79■□□□□ 0.28
HDAC4-215ENST00000543185 PDCD1Q15116 288 aa16.79■□□□□ 0.28
HDAC4-215ENST00000543185 DCAF12L2Q5VW00 463 aa16.79■□□□□ 0.28
HDAC4-215ENST00000543185 RABAC1Q9UI14 185 aa16.79■□□□□ 0.28
HDAC4-215ENST00000543185 COL18A1P39060 1754 aa16.79■□□□□ 0.28
HDAC4-215ENST00000543185 RNASE1P07998 156 aaKnown RBP16.79■□□□□ 0.28
HDAC4-215ENST00000543185 MMDQ15546 238 aa16.79■□□□□ 0.28
HDAC4-215ENST00000543185 LRTM2Q8N967 370 aa16.79■□□□□ 0.28
HDAC4-215ENST00000543185 OR51G1Q8NGK1 321 aa16.79■□□□□ 0.28
HDAC4-215ENST00000543185 PGLYRP4Q96LB8 373 aa16.79■□□□□ 0.28
HDAC4-215ENST00000543185 SPCS1Q9Y6A9 102 aa16.79■□□□□ 0.28
HDAC4-215ENST00000543185 FZR1Q9UM11 496 aa16.79■□□□□ 0.28
HDAC4-215ENST00000543185 PLXNA2O75051 1894 aa16.79■□□□□ 0.28
HDAC4-215ENST00000543185 HOXD4P09016 255 aaPredicted RBP16.79■□□□□ 0.28
HDAC4-215ENST00000543185 CCL7P80098 99 aa16.79■□□□□ 0.28
HDAC4-215ENST00000543185 ZNF418Q8TF45 676 aaPredicted RBP16.79■□□□□ 0.28
HDAC4-215ENST00000543185 TBL2Q9Y4P3 447 aaKnown RBP16.79■□□□□ 0.28
HDAC4-215ENST00000543185 A0A1W2PPC1 479 aa16.79■□□□□ 0.28
HDAC4-215ENST00000543185 C7orf71A4D174 169 aa16.79■□□□□ 0.28
HDAC4-215ENST00000543185 SRSF5Q13243 272 aaKnown RBP16.79■□□□□ 0.28
HDAC4-215ENST00000543185 RSPO2Q6UXX9 243 aaPredicted RBP16.79■□□□□ 0.28
HDAC4-215ENST00000543185 LINC01555Q8NAE3 123 aa16.79■□□□□ 0.28
HDAC4-215ENST00000543185 TMIGD3P0DMS9 266 aaPredicted RBP16.78■□□□□ 0.28
HDAC4-215ENST00000543185 ANAPC13Q9BS18 74 aa16.78■□□□□ 0.28
HDAC4-215ENST00000543185 ZSWIM8A7E2V4 1837 aa16.78■□□□□ 0.28
HDAC4-215ENST00000543185 C21orf140B9A014 251 aa16.78■□□□□ 0.28
HDAC4-215ENST00000543185 MT-CO3P00414 261 aa16.78■□□□□ 0.28
HDAC4-215ENST00000543185 LTBP4Q8N2S1 1624 aa16.78■□□□□ 0.28
HDAC4-215ENST00000543185 TUBA4BQ9H853 241 aa16.78■□□□□ 0.28
HDAC4-215ENST00000543185 ZNF658BQ4V348 819 aaPredicted RBP16.78■□□□□ 0.28
HDAC4-215ENST00000543185 FMC1Q96HJ9 113 aa16.78■□□□□ 0.28
HDAC4-215ENST00000543185 SDHCQ99643 169 aaPredicted RBP16.78■□□□□ 0.28
HDAC4-215ENST00000543185 WNK1Q9H4A3 2382 aa16.78■□□□□ 0.28
HDAC4-215ENST00000543185 TNFSF14O43557 240 aa16.78■□□□□ 0.28
HDAC4-215ENST00000543185 FAM106CPP0CH98 169 aa16.78■□□□□ 0.28
HDAC4-215ENST00000543185 FAM27BQ5VT28 67 aa16.78■□□□□ 0.28
HDAC4-215ENST00000543185 IMMP2LQ96T52 175 aa16.78■□□□□ 0.28
HDAC4-215ENST00000543185 HTN1P15515 57 aa16.78■□□□□ 0.28
HDAC4-215ENST00000543185 NUDT10Q8NFP7 164 aa16.78■□□□□ 0.28
HDAC4-215ENST00000543185 PRR13Q9NZ81 148 aa16.78■□□□□ 0.28
HDAC4-215ENST00000543185 A8MXK9 166 aa16.77■□□□□ 0.28
HDAC4-215ENST00000543185 ZIC1Q15915 447 aa16.77■□□□□ 0.28
HDAC4-215ENST00000543185 GPR82Q96P67 336 aa16.77■□□□□ 0.28
HDAC4-215ENST00000543185 RND3P61587 244 aa16.77■□□□□ 0.28
HDAC4-215ENST00000543185 TRBV5-5A0A0J9YX44 114 aa16.77■□□□□ 0.28
HDAC4-215ENST00000543185 MRPL52Q86TS9 123 aaKnown RBP16.77■□□□□ 0.28
HDAC4-215ENST00000543185 C8orf88P0DMB2 117 aa16.77■□□□□ 0.27
HDAC4-215ENST00000543185 MS4A5Q9H3V2 200 aa16.77■□□□□ 0.27
HDAC4-215ENST00000543185 TMEM252Q8N6L7 170 aa16.77■□□□□ 0.27
HDAC4-215ENST00000543185 ZNF146Q15072 292 aa16.76■□□□□ 0.27
HDAC4-215ENST00000543185 ANAPC1Q9H1A4 1944 aa16.76■□□□□ 0.27
HDAC4-215ENST00000543185 OR4X2Q8NGF9 303 aa16.76■□□□□ 0.27
HDAC4-215ENST00000543185 SSBP4Q9BWG4 385 aaPredicted RBP16.76■□□□□ 0.27
HDAC4-215ENST00000543185 LPAR2Q9HBW0 351 aa16.76■□□□□ 0.27
HDAC4-215ENST00000543185 C5orf30Q96GV9 206 aa16.76■□□□□ 0.27
HDAC4-215ENST00000543185 FAM157AC9JC47 383 aa16.76■□□□□ 0.27
HDAC4-215ENST00000543185 FAM216AQ8WUB2 273 aa16.76■□□□□ 0.27
HDAC4-215ENST00000543185 NEU1Q99519 415 aa16.76■□□□□ 0.27
HDAC4-215ENST00000543185 GDF9O60383 454 aa16.76■□□□□ 0.27
HDAC4-215ENST00000543185 MRPS18BQ9Y676 258 aaKnown RBP16.76■□□□□ 0.27
HDAC4-215ENST00000543185 OPN3Q9H1Y3 402 aaPredicted RBP16.76■□□□□ 0.27
HDAC4-215ENST00000543185 EDIL3O43854 480 aa16.76■□□□□ 0.27
HDAC4-215ENST00000543185 NUDT11Q96G61 164 aa16.76■□□□□ 0.27
HDAC4-215ENST00000543185 CD200R1LQ6Q8B3 271 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 APCDD1LQ8NCL9 501 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 H0YL77 283 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 MPZL1O95297 269 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 FAM71F2Q6NXP2 309 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 PRSS27Q9BQR3 290 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 HCFC1P51610 2035 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 ECSCRQ19T08 205 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 SIGMAR1Q99720 223 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 RIF1Q5UIP0 2472 aaKnown RBP16.75■□□□□ 0.27
HDAC4-215ENST00000543185 TTC9CQ8N5M4 171 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 RUNX1Q01196 453 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 FBXW9Q5XUX1 488 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 CBLN3Q6UW01 205 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 OR2K2Q8NGT1 345 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 ARHGAP21Q5T5U3 1957 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 TMSB15BA0A087X1C1 80 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 ODAMA1E959 279 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 IGHV4-34P06331 123 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 SNRPD3P62318 126 aaKnown RBP16.75■□□□□ 0.27
HDAC4-215ENST00000543185 ZP4Q12836 540 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 MEIG1Q5JSS6 88 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 FLRT3Q9NZU0 649 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 GPR132Q9UNW8 380 aa16.75■□□□□ 0.27
HDAC4-215ENST00000543185 MGST2Q99735 147 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms