RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 SEC22CQ9BRL7 303 aa7.51□□□□□ -1.21
DDX55-208ENST00000541259 MARVELD1Q9BSK0 173 aa7.51□□□□□ -1.21
DDX55-208ENST00000541259 MEGF9Q9H1U4 602 aa7.51□□□□□ -1.21
DDX55-208ENST00000541259 NAA60Q9H7X0 242 aa7.51□□□□□ -1.21
DDX55-208ENST00000541259 FAM96BQ9Y3D0 163 aa7.51□□□□□ -1.21
DDX55-208ENST00000541259 CUBNO60494 3623 aa7.51□□□□□ -1.21
DDX55-208ENST00000541259 A0A0B4J293 547 aa7.5□□□□□ -1.21
DDX55-208ENST00000541259 TEX13DA0A0J9YY54 714 aaPredicted RBP7.5□□□□□ -1.21
DDX55-208ENST00000541259 C3orf85A0A1B0GTC6 90 aa7.5□□□□□ -1.21
DDX55-208ENST00000541259 OOSP1A8MZH6 123 aa7.5□□□□□ -1.21
DDX55-208ENST00000541259 H0YJW9 148 aa7.5□□□□□ -1.21
DDX55-208ENST00000541259 RAMP3O60896 148 aa7.5□□□□□ -1.21
DDX55-208ENST00000541259 FCGR3BO75015 233 aa7.5□□□□□ -1.21
DDX55-208ENST00000541259 PEX14O75381 377 aa7.5□□□□□ -1.21
DDX55-208ENST00000541259 MECP2P51608 486 aaKnown RBP7.5□□□□□ -1.21
DDX55-208ENST00000541259 BPIFB3P59826 476 aa7.5□□□□□ -1.21
DDX55-208ENST00000541259 SLC9A3R2Q15599 337 aa7.5□□□□□ -1.21
DDX55-208ENST00000541259 ZNF585BQ52M93 769 aa7.5□□□□□ -1.21
DDX55-208ENST00000541259 TMEM128Q5BJH2 165 aa7.5□□□□□ -1.21
DDX55-208ENST00000541259 KCTD9Q7L273 389 aa7.5□□□□□ -1.21
DDX55-208ENST00000541259 SPAG16Q8N0X2 631 aa7.5□□□□□ -1.21
DDX55-208ENST00000541259 OR8H3Q8N146 312 aa7.5□□□□□ -1.21
DDX55-208ENST00000541259 CCDC71LQ8N9Z2 235 aa7.5□□□□□ -1.21
DDX55-208ENST00000541259 OR5AN1Q8NGI8 311 aa7.5□□□□□ -1.21
DDX55-208ENST00000541259 WDR89Q96FK6 387 aaPredicted RBP7.5□□□□□ -1.21
DDX55-208ENST00000541259 SLC35D1Q9NTN3 355 aa7.5□□□□□ -1.21
DDX55-208ENST00000541259 C9orf170A2RU37 121 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 FAM90A9PA6NNJ1 464 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 H7C2Y5 167 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 TXNL1O43396 289 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 SFT2D2O95562 160 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 IGKV1-39P01597 117 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 IGKV1-16P04430 117 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 IGKV1D-39P04432 117 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 SNRNP70P08621 437 aaKnown RBP7.49□□□□□ -1.21
DDX55-208ENST00000541259 FBP1P09467 338 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 OR5AC1P0C628 307 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 HNF1AP20823 631 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 S100GP29377 79 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 LPAR6P43657 344 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 TAS2R31P59538 309 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 UBE2MP61081 183 aaKnown RBP7.49□□□□□ -1.21
DDX55-208ENST00000541259 CATR1Q13166 79 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 DHRS2Q13268 280 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 HABP2Q14520 560 aaPredicted RBP7.49□□□□□ -1.21
DDX55-208ENST00000541259 HNF4GQ14541 408 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 TMEM187Q14656 261 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 ANKRD55Q3KP44 614 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 C4orf46Q504U0 113 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 CCDC144NLQ6NUI1 221 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 SGPP2Q8IWX5 399 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 LHFPL5Q8TAF8 219 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 PIFOQ8TCI5 191 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 CASTOR1Q8WTX7 329 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 GLYATL2Q8WU03 294 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 ADTRPQ96IZ2 230 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 SSX3Q99909 188 aa7.49□□□□□ -1.21
DDX55-208ENST00000541259 ALX4Q9H161 411 aaPredicted RBP7.49□□□□□ -1.21
DDX55-208ENST00000541259 SRRM4A7MD48 611 aaKnown RBP7.48□□□□□ -1.21
DDX55-208ENST00000541259 RNF212BA8MTL3 300 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 H0Y980 276 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 VENTXO95231 258 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 CRYZL1O95825 349 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 DHFRP00374 187 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 IFNA2P01563 188 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 IGKV1D-33P01593 117 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 IGKV1-33P01594 117 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 IGHV4-59P01825 116 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 HLA-AP01891 365 aaKnown RBP7.48□□□□□ -1.21
DDX55-208ENST00000541259 APOA2P02652 100 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 IL5P05113 134 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 RPA2P15927 270 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 CNTFRP26992 372 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 CD1BP29016 333 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 RAG2P55895 527 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 LIN54Q6MZP7 749 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 Q6ZS46 218 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 LYG2Q86SG7 212 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 TEX29Q8N6K0 151 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 SIGLECL1Q8N7X8 197 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 MINDY2Q8NBR6 621 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 GALNT14Q96FL9 552 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 EAF1Q96JC9 268 aaPredicted RBP7.48□□□□□ -1.21
DDX55-208ENST00000541259 TMEM222Q9H0R3 208 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 LIN7CQ9NUP9 197 aaKnown RBP7.48□□□□□ -1.21
DDX55-208ENST00000541259 PRELID3BQ9Y3B1 194 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 WASHC3Q9Y3C0 194 aa7.48□□□□□ -1.21
DDX55-208ENST00000541259 A0A0A6YYJ9 748 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 VGLL3A8MV65 326 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 H3BUX3 64 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 S1PR2O95136 353 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 SRD5A1P18405 259 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 UCP1P25874 307 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 BRS3P32247 399 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 MC5RP33032 325 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 KIR2DS2P43631 304 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 IER3P46695 156 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 DYNLT3P51808 116 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 F2RL1P55085 397 aa7.47□□□□□ -1.21
DDX55-208ENST00000541259 RPS16P62249 146 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms