RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 TMEM38BQ9NVV0 291 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 RAB22AQ9UL26 194 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 YTHDF2Q9Y5A9 579 aaKnown RBP3.2□□□□□ -1.9
YBX3-210ENST00000540975 GLI3P10071 1580 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 UBR2Q8IWV8 1755 aa3.2□□□□□ -1.9
YBX3-210ENST00000540975 TCRBV9S1A1TA0A576 114 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 TMEM72A0PK05 275 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 FAM159BA6NKW6 160 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 MFSD11O43934 449 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 OR7C2O60412 319 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 ALOX12BO75342 701 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 PIAS1O75925 651 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 MPC2O95563 127 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 CLIC3O95833 236 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 IGKV1-17P01599 117 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 HLA-DQB1P01920 261 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 CRYBA1P05813 215 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 UBBP0CG47 229 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 LIMS3P0CW19 117 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 LIMS4P0CW20 117 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 OR5H8P0DN80 308 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 OR13C7P0DN81 318 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 CD79AP11912 226 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 HLA-EP13747 358 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 FGF7P21781 194 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 RPS3P23396 243 aaKnown RBP eCLIP3.19□□□□□ -1.9
YBX3-210ENST00000540975 MYL9P24844 172 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 S100A2P29034 98 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 DLX6P56179 175 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 ZNF121P58317 390 aaPredicted RBP3.19□□□□□ -1.9
YBX3-210ENST00000540975 SNRPFP62306 86 aaKnown RBP3.19□□□□□ -1.9
YBX3-210ENST00000540975 OR5I1Q13606 314 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 FZD2Q14332 565 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 EDDM3AQ14507 147 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 QPRTQ15274 297 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 FAM74A1Q5RGS3 127 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 COL5A1-AS1Q5SY13 56 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 LDLRAD2Q5SZI1 272 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 GLYATQ6IB77 296 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 EPGNQ6UW88 154 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 TOMM20LQ6UXN7 152 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 WDR82Q6UXN9 313 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 Q6ZT83 130 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 MBOAT2Q6ZWT7 520 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 MUC15Q8N387 334 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 ZNF615Q8N8J6 731 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 VN1R2Q8NFZ6 395 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 OR8D4Q8NGM9 314 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 OR13C6PQ8NH95 151 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 PLPPR1Q8TBJ4 325 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 GPR119Q8TDV5 335 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 EEF1AKMT1Q8WVE0 214 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 PTX4Q96A99 478 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 RCN3Q96D15 328 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 IMP4Q96G21 291 aaKnown RBP3.19□□□□□ -1.9
YBX3-210ENST00000540975 DNAJC30Q96LL9 226 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 RDH12Q96NR8 316 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 FAIM2Q9BWQ8 316 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 TAPBPLQ9BX59 468 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 PRO1933Q9H354 126 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 NMRAL1Q9HBL8 299 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 RETNQ9HD89 108 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 ENY2Q9NPA8 101 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 SPANXB1Q9NS25 103 aaPredicted RBP3.19□□□□□ -1.9
YBX3-210ENST00000540975 MARCOQ9UEW3 520 aaPredicted RBP3.19□□□□□ -1.9
YBX3-210ENST00000540975 HSPB8Q9UJY1 196 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 RFNGQ9Y644 331 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 V9GYH0 126 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 V9GYS6 101 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 DUOX1Q9NRD9 1551 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 COL18A1P39060 1754 aa3.19□□□□□ -1.9
YBX3-210ENST00000540975 TRAV30A0A087WSZ9 112 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 A0A087WUJ7 227 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 A0A087WX48 190 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 TRAV39A0A0B4J263 110 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 GLYATL1P3A0A0U1RQE8 302 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 PNMA8CA0A1B0GUJ8 204 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 TMEM218A2RU14 115 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 OR5H1A6NKK0 313 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 AIPO00170 330 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 HMGB3O15347 200 aaKnown RBP3.18□□□□□ -1.9
YBX3-210ENST00000540975 RDH16O75452 317 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 DIRAS1O95057 198 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 CFDP00746 253 aaPredicted RBP3.18□□□□□ -1.9
YBX3-210ENST00000540975 SERPINE1P05121 402 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 FABP3P05413 133 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 NMBP08949 121 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 TLX1NBP0CAT3 122 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 NSG1P42857 185 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 UBE2AP49459 152 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 TAS2R31P59538 309 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 PAFAH1B2P68402 229 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 SLC35B1P78383 322 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 CDK6Q00534 326 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 PSG4Q00888 419 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 PLCXD2Q0VAA5 305 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 HTR4Q13639 388 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 SNRNP35Q16560 246 aaKnown RBP3.18□□□□□ -1.9
YBX3-210ENST00000540975 LRRC75BQ2VPJ9 315 aa3.18□□□□□ -1.9
YBX3-210ENST00000540975 CCSMST1Q4G0I0 132 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms