RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 WISP2O76076 250 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 CD99P14209 185 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 UBE2NP61088 152 aaKnown RBP10.26□□□□□ -0.77
NPC1-202ENST00000540608 LBHQ53QV2 105 aaPredicted RBP10.26□□□□□ -0.77
NPC1-202ENST00000540608 WDR31Q8NA23 367 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 HSD17B10Q99714 261 aaKnown RBP10.26□□□□□ -0.77
NPC1-202ENST00000540608 PRRC2CQ9Y520 2896 aaKnown RBP10.26□□□□□ -0.77
NPC1-202ENST00000540608 LOC400499M0QZD8 3231 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 KNTC1P50748 2209 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 ZNF891A8MT65 544 aaPredicted RBP10.26□□□□□ -0.77
NPC1-202ENST00000540608 TMPRSS2O15393 492 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 SPINK9Q5DT21 86 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 ATP1A1-AS1Q5TC04 95 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 Q6ZR03 302 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 PRR7Q8TB68 274 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 MRGPRDQ8TDS7 321 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 TMEM18Q96B42 140 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 OBP2BQ9NPH6 170 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 WDR83OSQ9Y284 106 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 LINC00473A8K010 186 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 C15orf62A8K5M9 175 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 CCKARP32238 428 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 GABRA2P47869 451 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 TGFBR3Q03167 851 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 ACP7Q6ZNF0 438 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 ZNF826PQ6ZT77 177 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 LINC01551Q86U37 167 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 KLF14Q8TD94 323 aaPredicted RBP10.26□□□□□ -0.77
NPC1-202ENST00000540608 RAB1CQ92928 201 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 LURAP1Q96LR2 239 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 IMMP2LQ96T52 175 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 SPRR3Q9UBC9 169 aa10.26□□□□□ -0.77
NPC1-202ENST00000540608 CDX4O14627 284 aaPredicted RBP10.25□□□□□ -0.77
NPC1-202ENST00000540608 SOX15O60248 233 aa10.25□□□□□ -0.77
NPC1-202ENST00000540608 DEFA4P12838 97 aa10.25□□□□□ -0.77
NPC1-202ENST00000540608 IGHV1-2P23083 117 aa10.25□□□□□ -0.77
NPC1-202ENST00000540608 CD1BP29016 333 aa10.25□□□□□ -0.77
NPC1-202ENST00000540608 CHRNA7P36544 502 aa10.25□□□□□ -0.77
NPC1-202ENST00000540608 MPV17P39210 176 aa10.25□□□□□ -0.77
NPC1-202ENST00000540608 TAS2R60P59551 318 aa10.25□□□□□ -0.77
NPC1-202ENST00000540608 GNB1P62873 340 aa10.25□□□□□ -0.77
NPC1-202ENST00000540608 RNFT1Q5M7Z0 435 aa10.25□□□□□ -0.77
NPC1-202ENST00000540608 BTF3L4Q96K17 158 aa10.25□□□□□ -0.77
NPC1-202ENST00000540608 C2orf88Q9BSF0 95 aa10.25□□□□□ -0.77
NPC1-202ENST00000540608 TRGV5A0A0B4J1U4 118 aa10.25□□□□□ -0.77
NPC1-202ENST00000540608 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.25□□□□□ -0.77
NPC1-202ENST00000540608 MARCH11A6NNE9 402 aa10.25□□□□□ -0.77
NPC1-202ENST00000540608 ZNF705GA8MUZ8 300 aaPredicted RBP10.25□□□□□ -0.77
NPC1-202ENST00000540608 LINC00205P59089 165 aa10.25□□□□□ -0.77
NPC1-202ENST00000540608 DHRS13Q6UX07 377 aa10.25□□□□□ -0.77
NPC1-202ENST00000540608 CXorf67Q86X51 503 aaPredicted RBP10.25□□□□□ -0.77
NPC1-202ENST00000540608 OR5T1Q8NG75 326 aa10.25□□□□□ -0.77
NPC1-202ENST00000540608 GMPPAQ96IJ6 420 aaPredicted RBP10.25□□□□□ -0.77
NPC1-202ENST00000540608 QTRT1Q9BXR0 403 aaKnown RBP10.25□□□□□ -0.77
NPC1-202ENST00000540608 KCNIP2Q9NS61 270 aa10.25□□□□□ -0.77
NPC1-202ENST00000540608 DIDO1Q9BTC0 2240 aaKnown RBP10.24□□□□□ -0.77
NPC1-202ENST00000540608 SP9P0CG40 484 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 RNF224P0DH78 156 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 CD46P15529 392 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 CNN1P51911 297 aaKnown RBP10.24□□□□□ -0.77
NPC1-202ENST00000540608 FOXL1Q12952 345 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 Q3ZCU0 254 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 FAM78BQ5VT40 261 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 BEND2Q8NDZ0 799 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 CXXC4Q9H2H0 198 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 WASF3Q9UPY6 502 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 F6UZH7 168 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 TNFSF15O95150 251 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 CRYAAP02489 173 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 IL3RAP26951 378 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 CD82P27701 267 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 SSTR5P35346 364 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 RPL15P61313 204 aaKnown RBP10.24□□□□□ -0.77
NPC1-202ENST00000540608 PRSS8Q16651 343 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 AARDQ4LEZ3 155 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 INO80CQ6PI98 192 aaPredicted RBP10.24□□□□□ -0.77
NPC1-202ENST00000540608 TMEM144Q7Z5S9 345 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 R3HDM4Q96D70 268 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 NDUFAF3Q9BU61 184 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 PSG11Q9UQ72 335 aa10.24□□□□□ -0.77
NPC1-202ENST00000540608 ASPMQ8IZT6 3477 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 TRAV38-1A0A0B4J264 116 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 A0A1W2PPV4 95 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 IFNL4K9M1U5 179 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 MPDU1O75352 247 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 NDUFB4O95168 129 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 OR9G9P0C7N8 305 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 ATP5G3P48201 142 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 HOXA4Q00056 320 aaPredicted RBP10.23□□□□□ -0.77
NPC1-202ENST00000540608 FOXF2Q12947 444 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 GCSAMLQ5JQS6 135 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 CST9LP1Q5W188 147 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 GBGT1Q8N5D6 347 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 OR13A1Q8NGR1 328 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 MISP3Q96FF7 219 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 USF3Q68DE3 2245 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 DOCK11Q5JSL3 2073 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 IGHV3-43A0A0B4J1X8 118 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 FAM90A9PA6NNJ1 464 aa10.23□□□□□ -0.77
NPC1-202ENST00000540608 ST8SIA5O15466 376 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms