RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 WFDC5Q8TCV5 224 aa7.55□□□□□ -1.2
YBX3-208ENST00000540447 ALKBH3Q96Q83 286 aaPredicted RBP7.55□□□□□ -1.2
YBX3-208ENST00000540447 WBP1LQ9NX94 342 aa7.55□□□□□ -1.2
YBX3-208ENST00000540447 J3KRW8 73 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 MLNRO43193 412 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 PGLYRP1O75594 196 aaPredicted RBP7.54□□□□□ -1.2
YBX3-208ENST00000540447 OR9G9P0C7N8 305 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 MEIG1Q5JSS6 88 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 CXorf67Q86X51 503 aaPredicted RBP7.54□□□□□ -1.2
YBX3-208ENST00000540447 LRTM2Q8N967 370 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 OR13H1Q8NG92 308 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 INSL6Q9Y581 213 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 PRSS27Q9BQR3 290 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 TTC3P53804 2025 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 LRRC37A3O60309 1634 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 TRAV12-3A0A0B4J271 114 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 TMEM8BA6NDV4 472 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 SCRG1O75711 98 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 C3AR1Q16581 482 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 FBXW9Q5XUX1 488 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 SRSF8Q9BRL6 282 aaKnown RBP7.54□□□□□ -1.2
YBX3-208ENST00000540447 EGLN1Q9GZT9 426 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 TRIP11Q15643 1979 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 H3BRM9 83 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 LYZL6O75951 148 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 IGHV3-13P01766 116 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 IGHV3-7P01780 117 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 CACNG7P62955 275 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 GUSBP1Q15486 140 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 MRPL43Q8N983 215 aaKnown RBP7.54□□□□□ -1.2
YBX3-208ENST00000540447 ZPLD1Q8TCW7 415 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 ARFGEF2Q9Y6D5 1785 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 C17orf51A8MQB3 221 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 PRSS12P56730 875 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 ZNF415Q09FC8 603 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 DEFB115Q30KQ5 88 aa7.54□□□□□ -1.2
YBX3-208ENST00000540447 C6orf106Q9H6K1 298 aaPredicted RBP7.54□□□□□ -1.2
YBX3-208ENST00000540447 C9orf118A6NHY6 69 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 ZGLP1P0C6A0 271 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 DLX6P56179 175 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 KIR3DL3Q8N743 410 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 ZNF441Q8N8Z8 693 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 TRBV20OR9-2A0A075B6H5 130 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 A0A1W2PQM1 296 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 K7EP34 96 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 SYNGR1O43759 233 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 CXCL13O43927 109 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 MRPS11P82912 194 aaKnown RBP7.53□□□□□ -1.2
YBX3-208ENST00000540447 NUP205Q92621 2012 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 H0YIZ8 118 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 CCL25O15444 150 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 DPM2O94777 84 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 ZNF32P17041 273 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 POU2AF1Q16633 256 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 RBPMS2Q6ZRY4 209 aaKnown RBP7.53□□□□□ -1.2
YBX3-208ENST00000540447 MVB12AQ96EY5 273 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 C3P01024 1663 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 A0A1W2PRE2 83 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 PRRT4C9JH25 899 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 TMEM101Q96IK0 257 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 UPK3AO75631 287 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 FCN3O75636 299 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 RPL8P62917 257 aaKnown RBP7.53□□□□□ -1.2
YBX3-208ENST00000540447 SYT8Q8NBV8 401 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 NPCDR1Q9BY65 106 aa7.53□□□□□ -1.2
YBX3-208ENST00000540447 ALG1L2C9J202 215 aa7.52□□□□□ -1.2
YBX3-208ENST00000540447 TRACP01848 142 aa7.52□□□□□ -1.2
YBX3-208ENST00000540447 PRDX2P32119 198 aa7.52□□□□□ -1.2
YBX3-208ENST00000540447 TNXAQ16473 311 aa7.52□□□□□ -1.2
YBX3-208ENST00000540447 RASL11AQ6T310 242 aa7.52□□□□□ -1.2
YBX3-208ENST00000540447 FGFRL1Q8N441 504 aa7.52□□□□□ -1.2
YBX3-208ENST00000540447 ZNF703Q9H7S9 590 aaPredicted RBP7.52□□□□□ -1.2
YBX3-208ENST00000540447 CYTL1Q9NRR1 136 aa7.52□□□□□ -1.2
YBX3-208ENST00000540447 ZNF646O15015 1829 aaPredicted RBP7.52□□□□□ -1.21
YBX3-208ENST00000540447 A0A1B0GUT8 65 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 A0A1B0GX78 115 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 SHISA8B8ZZ34 492 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 ANOS1P23352 680 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 FOXL1Q12952 345 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 UNC119Q13432 240 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 ZNF56Q15929 161 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 OR51G1Q8NGK1 321 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 MESP1Q9BRJ9 268 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 NUP188Q5SRE5 1749 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 HIGD1CA8MV81 97 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 ZG16O60844 167 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 CD160O95971 181 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 PLAUP00749 431 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 CD46P15529 392 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 YPEL5P62699 121 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 ATXN8Q156A1 80 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 GAGE2AQ6NT46 116 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 UBR1Q8IWV7 1749 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 F8W1H4 67 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 IGFBP2P18065 325 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 EVI2AP22794 236 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 DPTQ07507 201 aa7.52□□□□□ -1.21
YBX3-208ENST00000540447 FAM53AQ6NSI3 398 aaPredicted RBP7.52□□□□□ -1.21
YBX3-208ENST00000540447 ZNF764Q96H86 408 aaPredicted RBP7.52□□□□□ -1.21
YBX3-208ENST00000540447 C19orf24Q9BVV8 132 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms