RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 SNAPC3Q92966 411 aa5.19□□□□□ -1.58
SNHG1-212ENST00000539975 RBM14Q96PK6 669 aaKnown RBP5.19□□□□□ -1.58
SNHG1-212ENST00000539975 TSNAXQ99598 290 aaKnown RBP5.19□□□□□ -1.58
SNHG1-212ENST00000539975 RNF5Q99942 180 aa5.19□□□□□ -1.58
SNHG1-212ENST00000539975 PRRT1Q99946 306 aa5.19□□□□□ -1.58
SNHG1-212ENST00000539975 AGMATQ9BSE5 352 aa5.19□□□□□ -1.58
SNHG1-212ENST00000539975 C19orf24Q9BVV8 132 aa5.19□□□□□ -1.58
SNHG1-212ENST00000539975 GON7Q9BXV9 100 aa5.19□□□□□ -1.58
SNHG1-212ENST00000539975 MRPL20Q9BYC9 149 aaKnown RBP5.19□□□□□ -1.58
SNHG1-212ENST00000539975 RANBP3Q9H6Z4 567 aaPredicted RBP5.19□□□□□ -1.58
SNHG1-212ENST00000539975 ESM1Q9NQ30 184 aa5.19□□□□□ -1.58
SNHG1-212ENST00000539975 SLC35D1Q9NTN3 355 aa5.19□□□□□ -1.58
SNHG1-212ENST00000539975 SDHAF2Q9NX18 166 aa5.19□□□□□ -1.58
SNHG1-212ENST00000539975 C14orf166Q9Y224 244 aaKnown RBP5.19□□□□□ -1.58
SNHG1-212ENST00000539975 MOB4Q9Y3A3 225 aa5.19□□□□□ -1.58
SNHG1-212ENST00000539975 CSPG4Q6UVK1 2322 aa5.19□□□□□ -1.58
SNHG1-212ENST00000539975 MED13LQ71F56 2210 aa5.19□□□□□ -1.58
SNHG1-212ENST00000539975 M0QYG6 137 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 CREBL2O60519 120 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-212ENST00000539975 ACTL6BO94805 426 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 ATG12O94817 140 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 CT45A6P0DMU7 189 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 CT45A5P0DMU8 189 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 CT45A7P0DMV0 189 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 HKR1P10072 659 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 CD40LGP29965 261 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 ETV6P41212 452 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 LGALS7P47929 136 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 DGCR2P98153 550 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 DIAPH2-AS1Q14236 149 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 MSMO1Q15800 293 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 KRTAP21-3Q3LHN1 58 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 PRR31Q5SQ13 230 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 UTF1Q5T230 341 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 AADACL3Q5VUY0 350 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 LIN54Q6MZP7 749 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 FAM53AQ6NSI3 398 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-212ENST00000539975 Q6ZPA2 131 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 CCDC190Q86UF4 302 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 LYSMD2Q8IV50 215 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 FOXRED2Q8IWF2 684 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 ODF3L1Q8IXM7 274 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 SLC38A6Q8IZM9 456 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 CCDC71LQ8N9Z2 235 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 OR4S2Q8NH73 311 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 TERB2Q8NHR7 220 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 MOB3AQ96BX8 217 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 CYYR1Q96J86 154 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 NABP2Q9BQ15 211 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 SPATA25Q9BR10 227 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 PARP12Q9H0J9 701 aaKnown RBP5.18□□□□□ -1.58
SNHG1-212ENST00000539975 PTTG2Q9NZH5 202 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 COPZ2Q9P299 210 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 ANAPC10Q9UM13 185 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 RBMX2Q9Y388 322 aaKnown RBP5.18□□□□□ -1.58
SNHG1-212ENST00000539975 CELSR1Q9NYQ6 3014 aa5.18□□□□□ -1.58
SNHG1-212ENST00000539975 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.17□□□□□ -1.583e-19■■■■■ 82.1
SNHG1-212ENST00000539975 PIGBOS1A0A0B4J2F0 54 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 C9orf118A6NHY6 69 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 FAM90A9PA6NNJ1 464 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 H0YJW9 148 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 GPR31O00270 319 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 NBR2O15453 112 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 FGF16O43320 207 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 KCNAB3O43448 404 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 TNFSF12O43508 249 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 FCGR3BO75015 233 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 NDUFA7O95182 113 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 HRASP01112 189 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 SERPINE2P07093 398 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 VDAC2P45880 294 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-212ENST00000539975 UCP3P55916 312 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 ERVK-16P61578 105 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 SLC35B1P78383 322 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 SRSF2Q01130 221 aaKnown RBP5.17□□□□□ -1.58
SNHG1-212ENST00000539975 EBI3Q14213 229 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 HABP2Q14520 560 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-212ENST00000539975 VMA21Q3ZAQ7 101 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 LDLRAD2Q5SZI1 272 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 GLDNQ6ZMI3 551 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-212ENST00000539975 SLC35E3Q7Z769 313 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 CENPVQ7Z7K6 275 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-212ENST00000539975 TCTEX1D1Q8N7M0 179 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-212ENST00000539975 OR5AN1Q8NGI8 311 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 VSTM2AQ8TAG5 236 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 OSR1Q8TAX0 266 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-212ENST00000539975 PIFOQ8TCI5 191 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 ABHD5Q8WTS1 349 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 CFHR4Q92496 578 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 ZNF486Q96H40 463 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-212ENST00000539975 C20orf173Q96LM9 149 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 WDR12Q9GZL7 423 aaKnown RBP5.17□□□□□ -1.58
SNHG1-212ENST00000539975 CCL28Q9NRJ3 127 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 LIN7CQ9NUP9 197 aaKnown RBP5.17□□□□□ -1.58
SNHG1-212ENST00000539975 KCNIP3Q9Y2W7 256 aa5.17□□□□□ -1.58
SNHG1-212ENST00000539975 IGKV1D-13A0A0B4J2D9 117 aa5.16□□□□□ -1.58
SNHG1-212ENST00000539975 TEX13DA0A0J9YY54 714 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-212ENST00000539975 ANKRD20A5PA0PJZ0 165 aa5.16□□□□□ -1.58
SNHG1-212ENST00000539975 TMEM89A2RUT3 159 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms