RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 ZNF439Q8NDP4 499 aa8.4□□□□□ -1.06
SPARC-209ENST00000539687 BPIFCQ8NFQ6 507 aa8.4□□□□□ -1.06
SPARC-209ENST00000539687 OR10P1Q8NGE3 313 aa8.4□□□□□ -1.06
SPARC-209ENST00000539687 DTD1Q8TEA8 209 aa8.4□□□□□ -1.06
SPARC-209ENST00000539687 NEU4Q8WWR8 484 aaPredicted RBP8.4□□□□□ -1.06
SPARC-209ENST00000539687 TNFRSF14Q92956 283 aa8.4□□□□□ -1.06
SPARC-209ENST00000539687 C5orf30Q96GV9 206 aa8.4□□□□□ -1.06
SPARC-209ENST00000539687 LINC00052Q96N35 136 aa8.4□□□□□ -1.06
SPARC-209ENST00000539687 RBKSQ9H477 322 aa8.4□□□□□ -1.06
SPARC-209ENST00000539687 TREM1Q9NP99 234 aa8.4□□□□□ -1.06
SPARC-209ENST00000539687 TIMM9Q9Y5J7 89 aa8.4□□□□□ -1.06
SPARC-209ENST00000539687 TENM4Q6N022 2769 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 A0A1B0GW64 132 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 hCG_1809904A0A1W2PP81 198 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 A0A1W2PPE2 198 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 A0A1W2PR64 198 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 A0A1W2PRV1 198 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 LINC00473A8K010 186 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 CEBPZOSA8MTT3 80 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 J3QKU1 62 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 TNFRSF13BO14836 293 aaPredicted RBP8.39□□□□□ -1.07
SPARC-209ENST00000539687 TMEM50AO95807 157 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 MBP02144 154 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 APOA2P02652 100 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 RBP4P02753 201 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 NFYBP25208 207 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 HOXA4Q00056 320 aaPredicted RBP8.39□□□□□ -1.07
SPARC-209ENST00000539687 ZNF616Q08AN1 781 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 TUSC1Q2TAM9 212 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 MST1LQ2TV78 715 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 CT45A1Q5HYN5 189 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 OR2B11Q5JQS5 317 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 SPANXN5Q5MJ07 72 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 NCR3LG1Q68D85 454 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 LURAP1LQ8IV03 231 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 LYG1Q8N1E2 194 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 ZNF843Q8N446 348 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 LINC00311Q8N616 119 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 TMEM217Q8N7C4 229 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 CT45A3Q8NHU0 189 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 LINC01560Q8TB33 94 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 DDB2Q92466 427 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 TMEM186Q96B77 213 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 RBMXL1Q96E39 390 aaKnown RBP8.39□□□□□ -1.07
SPARC-209ENST00000539687 TIMD4Q96H15 378 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 TMEM147Q9BVK8 224 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 GGACTQ9BVM4 153 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 SEC11CQ9BY50 192 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 UNKLQ9H9P5 680 aaKnown RBP8.39□□□□□ -1.07
SPARC-209ENST00000539687 FKBP11Q9NYL4 201 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 CARHSP1Q9Y2V2 147 aaKnown RBP8.39□□□□□ -1.07
SPARC-209ENST00000539687 KPTNQ9Y664 436 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 MAST4O15021 2626 aa8.39□□□□□ -1.07
SPARC-209ENST00000539687 URB1O60287 2271 aaKnown RBP8.38□□□□□ -1.07
SPARC-209ENST00000539687 A0A087X0M5 115 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 SAA2-SAA4A0A096LPE2 208 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 A0A1B0GX30 115 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 RNF223E7ERA6 249 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 PPIHO43447 177 aaKnown RBP8.38□□□□□ -1.07
SPARC-209ENST00000539687 NXPH3O95157 252 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 GOSR1O95249 250 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 SNAPINO95295 136 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 IFNA17P01571 189 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 SAA2P0DJI9 122 aaPredicted RBP8.38□□□□□ -1.07
SPARC-209ENST00000539687 IAPPP10997 89 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 GNB2P62879 340 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 SLC38A11Q08AI6 406 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 LRRC75BQ2VPJ9 315 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 C4orf17Q53FE4 359 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 TMEM182Q6ZP80 229 aaPredicted RBP8.38□□□□□ -1.07
SPARC-209ENST00000539687 ZNF833PQ6ZTB9 187 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 TCF23Q7RTU1 214 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 OSR1Q8TAX0 266 aaPredicted RBP8.38□□□□□ -1.07
SPARC-209ENST00000539687 ZNF596Q8TC21 504 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 SUN5Q8TC36 379 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 BSCL2Q96G97 398 aaPredicted RBP8.38□□□□□ -1.07
SPARC-209ENST00000539687 ZNF251Q9BRH9 671 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 ENY2Q9NPA8 101 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 KCNIP2Q9NS61 270 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 CBLN4Q9NTU7 201 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 UQCC1Q9NVA1 299 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 PRNDQ9UKY0 176 aa8.38□□□□□ -1.07
SPARC-209ENST00000539687 C17orf112F2Z3M2 114 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 F8W036 122 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 RNASEK-C17orf49H0YIS7 233 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 H3BP45 60 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 DVL1O14640 695 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 MPDU1O75352 247 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 APOC3P02656 99 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 METTL15P1P0C7V9 234 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 SELLP14151 372 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 SNCAP37840 140 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 RAB13P51153 203 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 ZNF134P52741 427 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 BRWD1-AS2P59051 145 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 RAB11AP62491 216 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 TMEM267Q0VDI3 215 aaPredicted RBP8.37□□□□□ -1.07
SPARC-209ENST00000539687 RPL39P5Q59GN2 51 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 C10orf91Q5T1B1 145 aa8.37□□□□□ -1.07
SPARC-209ENST00000539687 CLEC9AQ6UXN8 241 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms