RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 FGF8P55075 233 aaPredicted RBP12.15□□□□□ -0.46
CDCA3-207ENST00000538862 NCMAPQ5T1S8 102 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 OR8G2PQ6IF36 304 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 FAM180AQ6UWF9 173 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 ACP7Q6ZNF0 438 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 C5orf30Q96GV9 206 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 TMEM147Q9BVK8 224 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 CTDSP1Q9GZU7 261 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 DIDO1Q9BTC0 2240 aaKnown RBP12.15□□□□□ -0.46
CDCA3-207ENST00000538862 UBE2L5PA0A1B0GUS4 154 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 RAB29O14966 203 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 CYB5BO43169 146 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 WISP2O76076 250 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 CLDN14O95500 239 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 KRASP01116 189 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 MBP02144 154 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 G6PCP35575 357 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 RPL30P62888 115 aaKnown RBP12.15□□□□□ -0.46
CDCA3-207ENST00000538862 AESQ08117 197 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 C1orf162Q8NEQ5 155 aaPredicted RBP12.15□□□□□ -0.46
CDCA3-207ENST00000538862 OR52L2PQ8NGH6 319 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 LURAP1Q96LR2 239 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 CIB3Q96Q77 187 aaPredicted RBP12.15□□□□□ -0.46
CDCA3-207ENST00000538862 AGMATQ9BSE5 352 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 DOK5Q9P104 306 aa12.15□□□□□ -0.46
CDCA3-207ENST00000538862 SPTBN1Q01082 2364 aaKnown RBP12.14□□□□□ -0.47
CDCA3-207ENST00000538862 IGHV3-64DA0A0J9YX35 117 aa12.14□□□□□ -0.47
CDCA3-207ENST00000538862 ODAMA1E959 279 aa12.14□□□□□ -0.47
CDCA3-207ENST00000538862 CEBPZOSA8MTT3 80 aa12.14□□□□□ -0.47
CDCA3-207ENST00000538862 ZNF737O75373 536 aa12.14□□□□□ -0.47
CDCA3-207ENST00000538862 RAB4AP20338 218 aa12.14□□□□□ -0.47
CDCA3-207ENST00000538862 KITLGP21583 273 aa12.14□□□□□ -0.47
CDCA3-207ENST00000538862 ZNF66Q6ZN08 573 aa12.14□□□□□ -0.47
CDCA3-207ENST00000538862 C1orf87Q8N0U7 546 aa12.14□□□□□ -0.47
CDCA3-207ENST00000538862 GCNT2Q8N0V5 402 aa12.14□□□□□ -0.47
CDCA3-207ENST00000538862 RPP25LQ8N5L8 163 aaKnown RBP12.14□□□□□ -0.47
CDCA3-207ENST00000538862 LHX4Q969G2 390 aa12.14□□□□□ -0.47
CDCA3-207ENST00000538862 COQ2Q96H96 371 aa12.14□□□□□ -0.47
CDCA3-207ENST00000538862 TRIB1Q96RU8 372 aa12.14□□□□□ -0.47
CDCA3-207ENST00000538862 PMS2P5A8MQ11 134 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 PRSS47A8MTI9 375 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 WNT9BO14905 357 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 S1PR2O95136 353 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 RNF224P0DH78 156 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 COX5AP20674 150 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 HOXC12P31275 282 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 ELLP55199 621 aaPredicted RBP12.13□□□□□ -0.47
CDCA3-207ENST00000538862 NDUFA6P56556 154 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 TAS2R60P59551 318 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 ZNF816Q0VGE8 651 aaPredicted RBP12.13□□□□□ -0.47
CDCA3-207ENST00000538862 SSX2Q16385 188 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 WDR25Q64LD2 544 aaPredicted RBP12.13□□□□□ -0.47
CDCA3-207ENST00000538862 ZNF826PQ6ZT77 177 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 FAM210BQ96KR6 192 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 USP9YO00507 2555 aaPredicted RBP12.13□□□□□ -0.47
CDCA3-207ENST00000538862 GTF3C1Q12789 2109 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 C17orf98A8MV24 154 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 HIST1H2BKO60814 126 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 YIF1AO95070 293 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 HIST1H2BJP06899 126 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 HIST1H2BOP23527 126 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 HIST1H2BBP33778 126 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 HIST1H2BDP58876 126 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 BRWD1-AS2P59051 145 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 HIST1H2BCP62807 126 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 PAX5Q02548 391 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 HIST2H2BEQ16778 126 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.13□□□□□ -0.47
CDCA3-207ENST00000538862 TRAT1Q6PIZ9 186 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 WDR82Q6UXN9 313 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 ZNF808Q8N4W9 903 aaPredicted RBP12.13□□□□□ -0.47
CDCA3-207ENST00000538862 WDR31Q8NA23 367 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 OR10P1Q8NGE3 313 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 MRGPRDQ8TDS7 321 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 HIST1H2BHQ93079 126 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 HSD17B10Q99714 261 aaKnown RBP12.13□□□□□ -0.47
CDCA3-207ENST00000538862 HIST1H2BNQ99877 126 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 HIST1H2BMQ99879 126 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 MIOXQ9UGB7 285 aa12.13□□□□□ -0.47
CDCA3-207ENST00000538862 CHD3Q12873 2000 aaKnown RBP12.13□□□□□ -0.47
CDCA3-207ENST00000538862 ICE1Q9Y2F5 2266 aa12.12□□□□□ -0.47
CDCA3-207ENST00000538862 TRBV24-1A0A075B6N3 115 aa12.12□□□□□ -0.47
CDCA3-207ENST00000538862 CTXND1A0A1B0GTU2 59 aa12.12□□□□□ -0.47
CDCA3-207ENST00000538862 SEC14L6B5MCN3 397 aa12.12□□□□□ -0.47
CDCA3-207ENST00000538862 SLC31A2O15432 143 aa12.12□□□□□ -0.47
CDCA3-207ENST00000538862 IGKV1D-33P01593 117 aa12.12□□□□□ -0.47
CDCA3-207ENST00000538862 IGKV1-33P01594 117 aa12.12□□□□□ -0.47
CDCA3-207ENST00000538862 OPN1MWP04001 364 aa12.12□□□□□ -0.47
CDCA3-207ENST00000538862 OPN1MW2P0DN77 364 aa12.12□□□□□ -0.47
CDCA3-207ENST00000538862 OPN1MW3P0DN78 364 aa12.12□□□□□ -0.47
CDCA3-207ENST00000538862 GABRA2P47869 451 aa12.12□□□□□ -0.47
CDCA3-207ENST00000538862 VWC2Q2TAL6 325 aa12.12□□□□□ -0.47
CDCA3-207ENST00000538862 SMIM21Q3B7S5 101 aa12.12□□□□□ -0.47
CDCA3-207ENST00000538862 H2BFWTQ7Z2G1 175 aa12.12□□□□□ -0.47
CDCA3-207ENST00000538862 CXorf67Q86X51 503 aaPredicted RBP12.12□□□□□ -0.47
CDCA3-207ENST00000538862 C1orf174Q8IYL3 243 aa12.12□□□□□ -0.47
CDCA3-207ENST00000538862 DTD1Q8TEA8 209 aa12.12□□□□□ -0.47
CDCA3-207ENST00000538862 GAR1Q9NY12 217 aaKnown RBP12.12□□□□□ -0.47
CDCA3-207ENST00000538862 NAT8Q9UHE5 227 aa12.12□□□□□ -0.47
CDCA3-207ENST00000538862 USF3Q68DE3 2245 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms