RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 MRPL33O75394 65 aaKnown RBP4.94□□□□□ -1.62
CHD4-206ENST00000536999 CLDN1O95832 211 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 HLA-DQA1P01909 254 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 OR10J4P0C629 311 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 AREGP15514 252 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 PTGDSP41222 190 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 DUSP3P51452 185 aaPredicted RBP4.94□□□□□ -1.62
CHD4-206ENST00000536999 KLF3P57682 345 aaPredicted RBP4.94□□□□□ -1.62
CHD4-206ENST00000536999 TAS2R45P59539 299 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 ERVK-16P61578 105 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 RHOBP62745 196 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 HTD2P86397 168 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 PSG4Q00888 419 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 TGFBR3Q03167 851 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 ZNF90Q03938 601 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 RSPO1Q2MKA7 263 aaPredicted RBP4.94□□□□□ -1.62
CHD4-206ENST00000536999 SNAI3Q3KNW1 292 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 PIGYQ3MUY2 71 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 ZNF542PQ5EBM4 170 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 FFAR4Q5NUL3 377 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 DCAF12Q5T6F0 453 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 TSPO2Q5TGU0 170 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 ZNF324BQ6AW86 544 aaPredicted RBP4.94□□□□□ -1.62
CHD4-206ENST00000536999 ZNF774Q6NX45 483 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 CRIP3Q6Q6R5 217 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 TMEM144Q7Z5S9 345 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 LINC01551Q86U37 167 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 GCNT2Q8N0V5 402 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 FAM58AQ8N1B3 248 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 FGFRL1Q8N441 504 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 ZNF645Q8N7E2 425 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 OR56B2PQ8NGI1 322 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 OR11L1Q8NGX0 322 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 SGMS2Q8NHU3 365 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 PPP1R35Q8TAP8 253 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 PLPPR1Q8TBJ4 325 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.94□□□□□ -1.62
CHD4-206ENST00000536999 BORCS7Q96B45 105 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 GALMQ96C23 342 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 BSCL2Q96G97 398 aaPredicted RBP4.94□□□□□ -1.62
CHD4-206ENST00000536999 SLC35E1Q96K37 410 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 ALKBH3Q96Q83 286 aaPredicted RBP4.94□□□□□ -1.62
CHD4-206ENST00000536999 TBX15Q96SF7 602 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 HDHD3Q9BSH5 251 aaPredicted RBP4.94□□□□□ -1.62
CHD4-206ENST00000536999 SOX7Q9BT81 388 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 RTL8AQ9BWD3 113 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 LIME1Q9H400 295 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 ZDHHC11Q9H8X9 412 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 ASCL3Q9NQ33 180 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 CCL28Q9NRJ3 127 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 IL36BQ9NZH7 164 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 ERRFI1Q9UJM3 462 aaPredicted RBP4.94□□□□□ -1.62
CHD4-206ENST00000536999 TRAPPC2LQ9UL33 140 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 ATXN7L1Q9ULK2 861 aaPredicted RBP4.94□□□□□ -1.62
CHD4-206ENST00000536999 SLC45A2Q9UMX9 530 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 MRPS16Q9Y3D3 137 aaKnown RBP4.94□□□□□ -1.62
CHD4-206ENST00000536999 TBL2Q9Y4P3 447 aaKnown RBP4.94□□□□□ -1.62
CHD4-206ENST00000536999 CHCHD2Q9Y6H1 151 aaPredicted RBP4.94□□□□□ -1.62
CHD4-206ENST00000536999 CACNA1CQ13936 2221 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 CELSR2Q9HCU4 2923 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 TMEM131Q92545 1883 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 MED13Q9UHV7 2174 aa4.94□□□□□ -1.62
CHD4-206ENST00000536999 SNRNP200O75643 2136 aaKnown RBP4.93□□□□□ -1.62
CHD4-206ENST00000536999 FREM3P0C091 2139 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 TMEM30CPA0ZSE6 113 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 OOEPA6NGQ2 149 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 LRRC3CA6NJW4 275 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 KIAA1324LA8MWY0 1029 aaPredicted RBP4.93□□□□□ -1.62
CHD4-206ENST00000536999 G3V3Y1 287 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 J3QT63 122 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 CDIPTO14735 213 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 RBFOX2O43251 390 aaKnown RBP eCLIP4.93□□□□□ -1.62
CHD4-206ENST00000536999 TNFSF15O95150 251 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 CTSBP07858 339 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 CELA2BP08218 269 aaPredicted RBP4.93□□□□□ -1.62
CHD4-206ENST00000536999 ADH4P08319 380 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 ZNF32P17041 273 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 PMCHP20382 165 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 RPL29P47914 159 aaKnown RBP4.93□□□□□ -1.62
CHD4-206ENST00000536999 OR1D5P58170 312 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 RPL15P61313 204 aaKnown RBP4.93□□□□□ -1.62
CHD4-206ENST00000536999 ERVS71-1P61550 626 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 RUNX1Q01196 453 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 ZFP36L1Q07352 338 aaKnown RBP4.93□□□□□ -1.62
CHD4-206ENST00000536999 GABRA6Q16445 453 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 TBR1Q16650 682 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 TMEM30BQ3MIR4 351 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 GFI1BQ5VTD9 330 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 OTPQ5XKR4 325 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 OR8G2PQ6IF36 304 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 H2BFWTQ7Z2G1 175 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 SMIM15Q7Z3B0 74 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 RPP25LQ8N5L8 163 aaKnown RBP4.93□□□□□ -1.62
CHD4-206ENST00000536999 ZNF738Q8NE65 137 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 SLC24A4Q8NFF2 622 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 DTD1Q8TEA8 209 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 SMIM12Q96EX1 92 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 TMEM208Q9BTX3 173 aa4.93□□□□□ -1.62
CHD4-206ENST00000536999 QTRT1Q9BXR0 403 aaKnown RBP4.93□□□□□ -1.62
CHD4-206ENST00000536999 SNHG12Q9BXW3 62 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms