RNA–Protein interactions for RNA: ENST00000536843.5

CHFR-213, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,424 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-213ENST00000536843 CRYAAP02489 173 aa13.15□□□□□ -0.3
CHFR-213ENST00000536843 LIFP15018 202 aa13.15□□□□□ -0.3
CHFR-213ENST00000536843 SSR4P51571 173 aa13.15□□□□□ -0.3
CHFR-213ENST00000536843 CLDN15P56746 228 aa13.15□□□□□ -0.3
CHFR-213ENST00000536843 PMP22Q01453 160 aa13.15□□□□□ -0.3
CHFR-213ENST00000536843 TRIP6Q15654 476 aaKnown RBP13.15□□□□□ -0.3
CHFR-213ENST00000536843 TRIM61Q5EBN2 209 aa13.15□□□□□ -0.3
CHFR-213ENST00000536843 OR56B2PQ8NGI1 322 aa13.15□□□□□ -0.3
CHFR-213ENST00000536843 UCN2Q96RP3 112 aa13.15□□□□□ -0.3
CHFR-213ENST00000536843 OR2W1Q9Y3N9 320 aa13.15□□□□□ -0.3
CHFR-213ENST00000536843 TNRC6BQ9UPQ9 1833 aaKnown RBP13.15□□□□□ -0.3
CHFR-213ENST00000536843 TRBV20OR9-2A0A075B6H5 130 aa13.14□□□□□ -0.31
CHFR-213ENST00000536843 PGPEP1LA6NFU8 196 aa13.14□□□□□ -0.31
CHFR-213ENST00000536843 FCN1O00602 326 aa13.14□□□□□ -0.31
CHFR-213ENST00000536843 DHHO43323 396 aa13.14□□□□□ -0.31
CHFR-213ENST00000536843 ATP5G3P48201 142 aa13.14□□□□□ -0.31
CHFR-213ENST00000536843 PRSS12P56730 875 aa13.14□□□□□ -0.31
CHFR-213ENST00000536843 ZNF324BQ6AW86 544 aaPredicted RBP13.14□□□□□ -0.31
CHFR-213ENST00000536843 ZDHHC23Q8IYP9 409 aa13.14□□□□□ -0.31
CHFR-213ENST00000536843 PNKDQ8N490 385 aa13.14□□□□□ -0.31
CHFR-213ENST00000536843 ZNF611Q8N823 705 aa13.14□□□□□ -0.31
CHFR-213ENST00000536843 ZIC4Q8N9L1 334 aa13.14□□□□□ -0.31
CHFR-213ENST00000536843 GNB4Q9HAV0 340 aa13.14□□□□□ -0.31
CHFR-213ENST00000536843 ZNF391Q9UJN7 358 aa13.14□□□□□ -0.31
CHFR-213ENST00000536843 CBY3A6NI87 242 aa13.14□□□□□ -0.31
CHFR-213ENST00000536843 WDR1O75083 606 aa13.14□□□□□ -0.31
CHFR-213ENST00000536843 RPS19BP1Q86WX3 136 aaKnown RBP13.14□□□□□ -0.31
CHFR-213ENST00000536843 TMEM105Q8N8V8 129 aa13.14□□□□□ -0.31
CHFR-213ENST00000536843 KCNS1Q96KK3 526 aa13.14□□□□□ -0.31
CHFR-213ENST00000536843 VPS25Q9BRG1 176 aa13.14□□□□□ -0.31
CHFR-213ENST00000536843 TRAV34A0A0B4J273 112 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 M0QZ24 198 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 SYNGR3O43761 229 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 CDC34P49427 236 aaPredicted RBP13.13□□□□□ -0.31
CHFR-213ENST00000536843 PRRX1P54821 245 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 LGALS4P56470 323 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 DSCR4P56555 118 aaPredicted RBP13.13□□□□□ -0.31
CHFR-213ENST00000536843 RHOGP84095 191 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 KRTCAP3Q53RY4 240 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 OR10J3Q5JRS4 329 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 PLCXD3Q63HM9 321 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 OR2Y1Q8NGV0 311 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 SH2D2AQ9NP31 389 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 hCG_38984A0A1B0GV85 526 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 A0A1W2PR80 420 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 TNFSF11O14788 317 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 TMEM11P17152 192 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 AMTP48728 403 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 HLA-DRB5Q30154 266 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 FAM27BQ5VT28 67 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 RDH5Q92781 318 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 UHRF2Q96PU4 802 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 TXNDC17Q9BRA2 123 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 NPCDR1Q9BY65 106 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 CSTL1Q9H114 145 aa13.13□□□□□ -0.31
CHFR-213ENST00000536843 SDK2Q58EX2 2172 aa13.12□□□□□ -0.31
CHFR-213ENST00000536843 IGLC7A0M8Q6 106 aa13.12□□□□□ -0.31
CHFR-213ENST00000536843 DPRXA6NFQ7 191 aa13.12□□□□□ -0.31
CHFR-213ENST00000536843 DUSP3P51452 185 aaPredicted RBP13.12□□□□□ -0.31
CHFR-213ENST00000536843 SAXO1Q8IYX7 474 aa13.12□□□□□ -0.31
CHFR-213ENST00000536843 LOXL4Q96JB6 756 aa13.12□□□□□ -0.31
CHFR-213ENST00000536843 SFXN3Q9BWM7 321 aa13.12□□□□□ -0.31
CHFR-213ENST00000536843 GNB1LQ9BYB4 327 aa13.12□□□□□ -0.31
CHFR-213ENST00000536843 SEPSECSQ9HD40 501 aaKnown RBP13.12□□□□□ -0.31
CHFR-213ENST00000536843 A0A0J9YW62 118 aa13.12□□□□□ -0.31
CHFR-213ENST00000536843 NPIPA2E9PIF3 369 aa13.12□□□□□ -0.31
CHFR-213ENST00000536843 NPIPA3F8WFD2 350 aa13.12□□□□□ -0.31
CHFR-213ENST00000536843 CLDN1O95832 211 aa13.12□□□□□ -0.31
CHFR-213ENST00000536843 C3orf79P0CE67 100 aa13.12□□□□□ -0.31
CHFR-213ENST00000536843 OCIAD2Q56VL3 154 aa13.12□□□□□ -0.31
CHFR-213ENST00000536843 APOBEC3DQ96AK3 386 aaPredicted RBP13.12□□□□□ -0.31
CHFR-213ENST00000536843 QTRT1Q9BXR0 403 aaKnown RBP13.12□□□□□ -0.31
CHFR-213ENST00000536843 MRPL27Q9P0M9 148 aaKnown RBP13.12□□□□□ -0.31
CHFR-213ENST00000536843 RTTNQ86VV8 2226 aa13.12□□□□□ -0.31
CHFR-213ENST00000536843 A0A1W2PS18 150 aa13.11□□□□□ -0.31
CHFR-213ENST00000536843 RNF212BA8MTL3 300 aa13.11□□□□□ -0.31
CHFR-213ENST00000536843 SNURFLB1AK76 121 aa13.11□□□□□ -0.31
CHFR-213ENST00000536843 IER3P46695 156 aa13.11□□□□□ -0.31
CHFR-213ENST00000536843 RPL19P84098 196 aaKnown RBP13.11□□□□□ -0.31
CHFR-213ENST00000536843 TFF3Q07654 80 aa13.11□□□□□ -0.31
CHFR-213ENST00000536843 VWC2Q2TAL6 325 aa13.11□□□□□ -0.31
CHFR-213ENST00000536843 ZNF585BQ52M93 769 aa13.11□□□□□ -0.31
CHFR-213ENST00000536843 PEAR1Q5VY43 1037 aaPredicted RBP13.11□□□□□ -0.31
CHFR-213ENST00000536843 RAB1CQ92928 201 aa13.11□□□□□ -0.31
CHFR-213ENST00000536843 CST9LQ9H4G1 147 aa13.11□□□□□ -0.31
CHFR-213ENST00000536843 PMS2P5A8MQ11 134 aa13.11□□□□□ -0.31
CHFR-213ENST00000536843 FOLR3P41439 243 aa13.11□□□□□ -0.31
CHFR-213ENST00000536843 KRTAP27-1Q3LI81 207 aa13.11□□□□□ -0.31
CHFR-213ENST00000536843 BATF2Q8N1L9 274 aa13.11□□□□□ -0.31
CHFR-213ENST00000536843 OR1L1Q8NH94 360 aa13.11□□□□□ -0.31
CHFR-213ENST00000536843 OR1F12Q8NHA8 337 aa13.11□□□□□ -0.31
CHFR-213ENST00000536843 SRXN1Q9BYN0 137 aa13.11□□□□□ -0.31
CHFR-213ENST00000536843 ERRFI1Q9UJM3 462 aaPredicted RBP13.11□□□□□ -0.31
CHFR-213ENST00000536843 BDP1A6H8Y1 2624 aa13.1□□□□□ -0.31
CHFR-213ENST00000536843 A0A0G2JMM0 328 aa13.1□□□□□ -0.31
CHFR-213ENST00000536843 ZNF816-ZNF321PA0A0X1KG74 233 aa13.1□□□□□ -0.31
CHFR-213ENST00000536843 A0A1W2PPB8 328 aa13.1□□□□□ -0.31
CHFR-213ENST00000536843 A0A1W2PRS3 328 aa13.1□□□□□ -0.31
CHFR-213ENST00000536843 OR5B21A6NL26 309 aa13.1□□□□□ -0.31
CHFR-213ENST00000536843 KIR3DP1A8MWS1 328 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms