RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 FCGR2CP31995 323 aa10.26□□□□□ -0.77
PRKDC-206ENST00000536429 CRIP2P52943 208 aaPredicted RBP10.26□□□□□ -0.77
PRKDC-206ENST00000536429 PDLIM3Q53GG5 364 aaPredicted RBP10.26□□□□□ -0.77
PRKDC-206ENST00000536429 OR2B11Q5JQS5 317 aa10.26□□□□□ -0.77
PRKDC-206ENST00000536429 MYOZ3Q8TDC0 251 aa10.26□□□□□ -0.77
PRKDC-206ENST00000536429 ABHD5Q8WTS1 349 aa10.26□□□□□ -0.77
PRKDC-206ENST00000536429 P2RX4Q99571 388 aa10.26□□□□□ -0.77
PRKDC-206ENST00000536429 GNB4Q9HAV0 340 aa10.26□□□□□ -0.77
PRKDC-206ENST00000536429 ANAPC10Q9UM13 185 aa10.26□□□□□ -0.77
PRKDC-206ENST00000536429 NUBP2Q9Y5Y2 271 aa10.26□□□□□ -0.77
PRKDC-206ENST00000536429 A0A1W2PN81 502 aa10.25□□□□□ -0.77
PRKDC-206ENST00000536429 SHOXO15266 292 aa10.25□□□□□ -0.77
PRKDC-206ENST00000536429 CHRNA7P36544 502 aa10.25□□□□□ -0.77
PRKDC-206ENST00000536429 LGALS7P47929 136 aa10.25□□□□□ -0.77
PRKDC-206ENST00000536429 RORCP51449 518 aa10.25□□□□□ -0.77
PRKDC-206ENST00000536429 BRWD1-AS2P59051 145 aa10.25□□□□□ -0.77
PRKDC-206ENST00000536429 GNB1P62873 340 aa10.25□□□□□ -0.77
PRKDC-206ENST00000536429 RTL8BQ17RB0 113 aa10.25□□□□□ -0.77
PRKDC-206ENST00000536429 ZNF562Q6V9R5 426 aa10.25□□□□□ -0.77
PRKDC-206ENST00000536429 IDO2Q6ZQW0 420 aa10.25□□□□□ -0.77
PRKDC-206ENST00000536429 GPR141Q7Z602 305 aa10.25□□□□□ -0.77
PRKDC-206ENST00000536429 PPP1R27Q86WC6 154 aa10.25□□□□□ -0.77
PRKDC-206ENST00000536429 LFNGQ8NES3 379 aa10.25□□□□□ -0.77
PRKDC-206ENST00000536429 GRPEL2Q8TAA5 225 aa10.25□□□□□ -0.77
PRKDC-206ENST00000536429 ARPC1AQ92747 370 aa10.25□□□□□ -0.77
PRKDC-206ENST00000536429 ADTRPQ96IZ2 230 aa10.25□□□□□ -0.77
PRKDC-206ENST00000536429 CCL28Q9NRJ3 127 aa10.25□□□□□ -0.77
PRKDC-206ENST00000536429 NECAP2Q9NVZ3 263 aa10.25□□□□□ -0.77
PRKDC-206ENST00000536429 MRPS7Q9Y2R9 242 aaKnown RBP10.25□□□□□ -0.77
PRKDC-206ENST00000536429 CCL24O00175 119 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 TNFSF12O43508 249 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 FCGR3BO75015 233 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 PPYP01298 95 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 APOA1P02647 267 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 MYCNOSP40205 109 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 CBX5P45973 191 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 CDX1P47902 265 aaPredicted RBP10.24□□□□□ -0.77
PRKDC-206ENST00000536429 RFX2P48378 723 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 RAB9AP51151 201 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 FXYD4P59646 89 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 TAGLNQ01995 201 aaKnown RBP10.24□□□□□ -0.77
PRKDC-206ENST00000536429 FXYD3Q14802 87 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 SPCS2Q15005 226 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 CDK10Q15131 360 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 KCTD9Q7L273 389 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 SNX29P2Q8IUI4 249 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 ZNF491Q8N8L2 437 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 OR5AP2Q8NGF4 316 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 SECTM1Q8WVN6 248 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 OR5B12Q96R08 314 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 IFT46Q9NQC8 304 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 TAS2R8Q9NYW2 309 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 FOXA2Q9Y261 457 aaPredicted RBP10.24□□□□□ -0.77
PRKDC-206ENST00000536429 TGP01266 2768 aa10.24□□□□□ -0.77
PRKDC-206ENST00000536429 DNAH9Q9NYC9 4486 aa10.23□□□□□ -0.77
PRKDC-206ENST00000536429 PMP2P02689 132 aa10.23□□□□□ -0.77
PRKDC-206ENST00000536429 RRASP10301 218 aa10.23□□□□□ -0.77
PRKDC-206ENST00000536429 ZNF182P17025 639 aaPredicted RBP10.23□□□□□ -0.77
PRKDC-206ENST00000536429 NAT1P18440 290 aa10.23□□□□□ -0.77
PRKDC-206ENST00000536429 PRSS3P35030 304 aa10.23□□□□□ -0.77
PRKDC-206ENST00000536429 ASPHD1Q5U4P2 390 aa10.23□□□□□ -0.77
PRKDC-206ENST00000536429 FOXB2Q5VYV0 432 aa10.23□□□□□ -0.77
PRKDC-206ENST00000536429 TMEM65Q6PI78 240 aa10.23□□□□□ -0.77
PRKDC-206ENST00000536429 UNQ5815/PRO19632Q6UWF5 114 aa10.23□□□□□ -0.77
PRKDC-206ENST00000536429 OVCH2Q7RTZ1 564 aa10.23□□□□□ -0.77
PRKDC-206ENST00000536429 CLVS1Q8IUQ0 354 aaPredicted RBP10.23□□□□□ -0.77
PRKDC-206ENST00000536429 LYSMD2Q8IV50 215 aa10.23□□□□□ -0.77
PRKDC-206ENST00000536429 VKORC1L1Q8N0U8 176 aa10.23□□□□□ -0.77
PRKDC-206ENST00000536429 MFSD4AQ8N468 514 aa10.23□□□□□ -0.77
PRKDC-206ENST00000536429 GPX8Q8TED1 209 aa10.23□□□□□ -0.77
PRKDC-206ENST00000536429 C4orf3Q8WVX3 66 aa10.23□□□□□ -0.77
PRKDC-206ENST00000536429 TCTEX1D2Q8WW35 142 aa10.23□□□□□ -0.77
PRKDC-206ENST00000536429 ACOT12Q8WYK0 555 aa10.23□□□□□ -0.77
PRKDC-206ENST00000536429 ALX4Q9H161 411 aaPredicted RBP10.23□□□□□ -0.77
PRKDC-206ENST00000536429 EHFQ9NZC4 300 aa10.23□□□□□ -0.77
PRKDC-206ENST00000536429 I3L521 148 aa10.22□□□□□ -0.77
PRKDC-206ENST00000536429 SLC22A5O76082 557 aa10.22□□□□□ -0.77
PRKDC-206ENST00000536429 SAA1P0DJI8 122 aaPredicted RBP10.22□□□□□ -0.77
PRKDC-206ENST00000536429 APELAP0DMC3 54 aa10.22□□□□□ -0.77
PRKDC-206ENST00000536429 HLA-DMAP28067 261 aa10.22□□□□□ -0.77
PRKDC-206ENST00000536429 SLC6A1P30531 599 aa10.22□□□□□ -0.77
PRKDC-206ENST00000536429 RAB25P57735 213 aa10.22□□□□□ -0.77
PRKDC-206ENST00000536429 UBE2KP61086 200 aa10.22□□□□□ -0.77
PRKDC-206ENST00000536429 CBX3Q13185 183 aa10.22□□□□□ -0.77
PRKDC-206ENST00000536429 ACTBL2Q562R1 376 aa10.22□□□□□ -0.77
PRKDC-206ENST00000536429 RNASE12Q5GAN4 147 aaKnown RBP10.22□□□□□ -0.77
PRKDC-206ENST00000536429 GIMAP1Q8WWP7 306 aa10.22□□□□□ -0.77
PRKDC-206ENST00000536429 RCC1LQ96I51 464 aaKnown RBP10.22□□□□□ -0.77
PRKDC-206ENST00000536429 UBE2E2Q96LR5 201 aa10.22□□□□□ -0.77
PRKDC-206ENST00000536429 CMTM3Q96MX0 182 aa10.22□□□□□ -0.77
PRKDC-206ENST00000536429 MS4A10Q96PG2 267 aa10.22□□□□□ -0.77
PRKDC-206ENST00000536429 DCUN1D5Q9BTE7 237 aa10.22□□□□□ -0.77
PRKDC-206ENST00000536429 SLC5A7Q9GZV3 580 aa10.22□□□□□ -0.77
PRKDC-206ENST00000536429 FAM25AB3EWG3 89 aa10.21□□□□□ -0.77
PRKDC-206ENST00000536429 FAM25CB3EWG5 89 aa10.21□□□□□ -0.77
PRKDC-206ENST00000536429 FAM25GB3EWG6 89 aa10.21□□□□□ -0.77
PRKDC-206ENST00000536429 RAMP3O60896 148 aa10.21□□□□□ -0.77
PRKDC-206ENST00000536429 CNIH1O95406 144 aa10.21□□□□□ -0.77
PRKDC-206ENST00000536429 HOXD3P31249 432 aaPredicted RBP10.21□□□□□ -0.77
PRKDC-206ENST00000536429 KRTAP10-11P60412 298 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms