RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 ELK1P19419 428 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 CD33P20138 364 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 MC5RP33032 325 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 CHRNA7P36544 502 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 TALDO1P37837 337 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 MYCNOSP40205 109 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 RFX2P48378 723 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 SERPINB10P48595 397 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 RAB9AP51151 201 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 LUMP51884 338 aaPredicted RBP3.91□□□□□ -1.78
USH1C-210ENST00000534556 SLURP1P55000 103 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 SCAND1P57086 179 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 TAS2R20P59543 309 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 GNG2P59768 71 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 RPS16P62249 146 aaKnown RBP3.91□□□□□ -1.78
USH1C-210ENST00000534556 EGFEM1PQ0D2K5 195 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 KIR2DS1Q14954 304 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 SPCS2Q15005 226 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 ECSCRQ19T08 205 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 CNIH2Q6PI25 160 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 ZNF562Q6V9R5 426 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 PPP1R27Q86WC6 154 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 ANKRD13BQ86YJ7 626 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 PDPNQ86YL7 162 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 VKORC1L1Q8N0U8 176 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 COMMD1Q8N668 190 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 SAMD12Q8N8I0 201 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 BEST4Q8NFU0 473 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 OR5T1Q8NG75 326 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 MS4A10Q96PG2 267 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 DCSTAMPQ9H295 470 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 GHITMQ9H3K2 345 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 ZFP57Q9NU63 452 aa3.91□□□□□ -1.78
USH1C-210ENST00000534556 RBMX2Q9Y388 322 aaKnown RBP3.91□□□□□ -1.78
USH1C-210ENST00000534556 A0A0A6YYH2 397 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 A6NJ64 397 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 NUDT19A8MXV4 375 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 TNFSF12O43508 249 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 FCGR3BO75015 233 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 RBBP9O75884 186 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 SPDEFO95238 335 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 TRBV12-3P01733 135 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 IGHV3-11P01762 117 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 PF4P02776 101 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 PRH1P02810 166 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 IL6RP08887 468 aaPredicted RBP3.9□□□□□ -1.79
USH1C-210ENST00000534556 SAA1P0DJI8 122 aaPredicted RBP3.9□□□□□ -1.79
USH1C-210ENST00000534556 EDN2P20800 178 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 GNRHRP30968 328 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 FCGR2CP31995 323 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 SLC35B1P78383 322 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 PITPNAQ00169 270 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 RUNX1Q01196 453 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 ZNF45Q02386 682 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 FXYD3Q14802 87 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 AKIRIN2Q53H80 203 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 CXorf66Q5JRM2 361 aaPredicted RBP3.9□□□□□ -1.79
USH1C-210ENST00000534556 UBE2NLQ5JXB2 153 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 GPR107Q5VW38 600 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 UNQ5815/PRO19632Q6UWF5 114 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 ZNF818PQ6ZRF7 136 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 OVCH2Q7RTZ1 564 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 PUSL1Q8N0Z8 303 aaKnown RBP3.9□□□□□ -1.79
USH1C-210ENST00000534556 MFSD4AQ8N468 514 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 ZNF645Q8N7E2 425 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 OR11H1Q8NG94 326 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 OR5AP2Q8NGF4 316 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 GRPEL2Q8TAA5 225 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 GPX8Q8TED1 209 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 SECTM1Q8WVN6 248 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 C4orf3Q8WVX3 66 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 DCUN1D4Q92564 292 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 ARPC1AQ92747 370 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 DLX4Q92988 240 aaPredicted RBP3.9□□□□□ -1.79
USH1C-210ENST00000534556 FLYWCH2Q96CP2 140 aaKnown RBP3.9□□□□□ -1.79
USH1C-210ENST00000534556 RHOVQ96L33 236 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 UBE2E2Q96LR5 201 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 HARBI1Q96MB7 349 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 TSNAXQ99598 290 aaKnown RBP3.9□□□□□ -1.79
USH1C-210ENST00000534556 RNF5Q99942 180 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 GINS4Q9BRT9 223 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 FXYD6Q9H0Q3 95 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 ZNF430Q9H8G1 570 aaPredicted RBP3.9□□□□□ -1.79
USH1C-210ENST00000534556 NECAP2Q9NVZ3 263 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 TAS2R8Q9NYW2 309 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 COMMD3Q9UBI1 195 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 FOXA2Q9Y261 457 aaPredicted RBP3.9□□□□□ -1.79
USH1C-210ENST00000534556 DMRT1Q9Y5R6 373 aa3.9□□□□□ -1.79
USH1C-210ENST00000534556 DYNC2H1Q8NCM8 4307 aaKnown RBP3.89□□□□□ -1.79
USH1C-210ENST00000534556 HMX3A6NHT5 357 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 MSGN1A6NI15 193 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 TEX22C9J3V5 150 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 SULT1C2O00338 296 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 CTDSP2O14595 271 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 SHOXO15266 292 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 PPYP01298 95 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 APOA2P02652 100 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 PMP2P02689 132 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 OR5H8P0DN80 308 aa3.89□□□□□ -1.79
USH1C-210ENST00000534556 VDAC1P21796 283 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms