RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 EBAG9O00559 213 aa13.65□□□□□ -0.22
UBXN1-216ENST00000533908 BET1O15155 118 aa13.65□□□□□ -0.22
UBXN1-216ENST00000533908 SHOXO15266 292 aa13.65□□□□□ -0.22
UBXN1-216ENST00000533908 PRH1P02810 166 aa13.65□□□□□ -0.22
UBXN1-216ENST00000533908 IFNA6P05013 189 aa13.65□□□□□ -0.22
UBXN1-216ENST00000533908 TPBGQ13641 420 aa13.65□□□□□ -0.22
UBXN1-216ENST00000533908 RPEL1Q2QD12 228 aa13.65□□□□□ -0.22
UBXN1-216ENST00000533908 LCN12Q6JVE5 192 aa13.65□□□□□ -0.22
UBXN1-216ENST00000533908 Q8N402 240 aa13.65□□□□□ -0.22
UBXN1-216ENST00000533908 MAFIPQ8WZ33 124 aa13.65□□□□□ -0.22
UBXN1-216ENST00000533908 DDB2Q92466 427 aa13.65□□□□□ -0.22
UBXN1-216ENST00000533908 PLEKHA3Q9HB20 300 aa13.65□□□□□ -0.22
UBXN1-216ENST00000533908 TMEM272A0A1B0GTI8 110 aa13.64□□□□□ -0.23
UBXN1-216ENST00000533908 RBMY1BA6NDE4 496 aaKnown RBP13.64□□□□□ -0.23
UBXN1-216ENST00000533908 RBMY1EA6NEQ0 496 aaKnown RBP13.64□□□□□ -0.23
UBXN1-216ENST00000533908 DENRO43583 198 aaKnown RBP13.64□□□□□ -0.23
UBXN1-216ENST00000533908 OR9G9P0C7N8 305 aa13.64□□□□□ -0.23
UBXN1-216ENST00000533908 RBMY1DP0C7P1 496 aaKnown RBP13.64□□□□□ -0.23
UBXN1-216ENST00000533908 EDN2P20800 178 aa13.64□□□□□ -0.23
UBXN1-216ENST00000533908 SERPINB10P48595 397 aa13.64□□□□□ -0.23
UBXN1-216ENST00000533908 ZNF45Q02386 682 aa13.64□□□□□ -0.23
UBXN1-216ENST00000533908 PRSS8Q16651 343 aa13.64□□□□□ -0.23
UBXN1-216ENST00000533908 TATDN3Q17R31 274 aa13.64□□□□□ -0.23
UBXN1-216ENST00000533908 IDO2Q6ZQW0 420 aa13.64□□□□□ -0.23
UBXN1-216ENST00000533908 GTSCR1Q86UQ5 136 aa13.64□□□□□ -0.23
UBXN1-216ENST00000533908 SNAPC3Q92966 411 aa13.64□□□□□ -0.23
UBXN1-216ENST00000533908 CABLES2Q9BTV7 478 aa13.64□□□□□ -0.23
UBXN1-216ENST00000533908 AKIP1Q9NQ31 210 aa13.64□□□□□ -0.23
UBXN1-216ENST00000533908 ZNF230Q9UIE0 474 aaPredicted RBP13.64□□□□□ -0.23
UBXN1-216ENST00000533908 LINC00473A8K010 186 aa13.63□□□□□ -0.23
UBXN1-216ENST00000533908 CASQ2O14958 399 aaPredicted RBP13.63□□□□□ -0.23
UBXN1-216ENST00000533908 OR2A4O95047 310 aa13.63□□□□□ -0.23
UBXN1-216ENST00000533908 FCGR3AP08637 254 aa13.63□□□□□ -0.23
UBXN1-216ENST00000533908 CD7P09564 240 aa13.63□□□□□ -0.23
UBXN1-216ENST00000533908 RHOGP84095 191 aa13.63□□□□□ -0.23
UBXN1-216ENST00000533908 CD300EQ496F6 205 aaPredicted RBP13.63□□□□□ -0.23
UBXN1-216ENST00000533908 TEX45Q8NA69 505 aa13.63□□□□□ -0.23
UBXN1-216ENST00000533908 OR56B1Q8NGI3 324 aa13.63□□□□□ -0.23
UBXN1-216ENST00000533908 UFD1Q92890 307 aa13.63□□□□□ -0.23
UBXN1-216ENST00000533908 PHB2Q99623 299 aa13.63□□□□□ -0.23
UBXN1-216ENST00000533908 DMRT1Q9Y5R6 373 aa13.63□□□□□ -0.23
UBXN1-216ENST00000533908 CEPT1Q9Y6K0 416 aa13.63□□□□□ -0.23
UBXN1-216ENST00000533908 IGKV1D-8A0A087WSZ0 117 aa13.62□□□□□ -0.23
UBXN1-216ENST00000533908 TRBV9A0A0B4J1U6 114 aa13.62□□□□□ -0.23
UBXN1-216ENST00000533908 SHISA3A0PJX4 238 aa13.62□□□□□ -0.23
UBXN1-216ENST00000533908 UBE2KP61086 200 aa13.62□□□□□ -0.23
UBXN1-216ENST00000533908 FABP5Q01469 135 aa13.62□□□□□ -0.23
UBXN1-216ENST00000533908 PLECQ15149 4684 aaKnown RBP13.62□□□□□ -0.23
UBXN1-216ENST00000533908 TNXAQ16473 311 aa13.62□□□□□ -0.23
UBXN1-216ENST00000533908 HES5Q5TA89 166 aa13.62□□□□□ -0.23
UBXN1-216ENST00000533908 DEFB125Q8N687 156 aa13.62□□□□□ -0.23
UBXN1-216ENST00000533908 OR10J5Q8NHC4 309 aa13.62□□□□□ -0.23
UBXN1-216ENST00000533908 SRSF12Q8WXF0 261 aaKnown RBP13.62□□□□□ -0.23
UBXN1-216ENST00000533908 NEURL2Q9BR09 285 aa13.62□□□□□ -0.23
UBXN1-216ENST00000533908 WFDC10AQ9H1F0 79 aa13.62□□□□□ -0.23
UBXN1-216ENST00000533908 CRYZL1O95825 349 aa13.61□□□□□ -0.23
UBXN1-216ENST00000533908 HSMCR30P0CW71 290 aa13.61□□□□□ -0.23
UBXN1-216ENST00000533908 GNB3P16520 340 aa13.61□□□□□ -0.23
UBXN1-216ENST00000533908 CALRP27797 417 aaKnown RBP13.61□□□□□ -0.23
UBXN1-216ENST00000533908 DUTP33316 252 aaKnown RBP13.61□□□□□ -0.23
UBXN1-216ENST00000533908 CD81P60033 236 aa13.61□□□□□ -0.23
UBXN1-216ENST00000533908 TAGLNQ01995 201 aaKnown RBP13.61□□□□□ -0.23
UBXN1-216ENST00000533908 RTL8BQ17RB0 113 aa13.61□□□□□ -0.23
UBXN1-216ENST00000533908 DEFB114Q30KQ6 69 aa13.61□□□□□ -0.23
UBXN1-216ENST00000533908 C10orf55Q5SWW7 151 aa13.61□□□□□ -0.23
UBXN1-216ENST00000533908 RAB3CQ96E17 227 aa13.61□□□□□ -0.23
UBXN1-216ENST00000533908 ZNF430Q9H8G1 570 aaPredicted RBP13.61□□□□□ -0.23
UBXN1-216ENST00000533908 RAB22AQ9UL26 194 aa13.61□□□□□ -0.23
UBXN1-216ENST00000533908 V9GY05 133 aa13.61□□□□□ -0.23
UBXN1-216ENST00000533908 RAB27BO00194 218 aa13.6□□□□□ -0.23
UBXN1-216ENST00000533908 ARL6IP5O75915 188 aa13.6□□□□□ -0.23
UBXN1-216ENST00000533908 ATP5G2Q06055 141 aa13.6□□□□□ -0.23
UBXN1-216ENST00000533908 EXOSC2Q13868 293 aaKnown RBP13.6□□□□□ -0.23
UBXN1-216ENST00000533908 VMA21Q3ZAQ7 101 aa13.6□□□□□ -0.23
UBXN1-216ENST00000533908 OR2K2Q8NGT1 345 aa13.6□□□□□ -0.23
UBXN1-216ENST00000533908 DUSP21Q9H596 190 aa13.6□□□□□ -0.23
UBXN1-216ENST00000533908 SCN3BQ9NY72 215 aa13.6□□□□□ -0.23
UBXN1-216ENST00000533908 PEMTQ9UBM1 199 aa13.6□□□□□ -0.23
UBXN1-216ENST00000533908 SELENOKQ9Y6D0 94 aa13.6□□□□□ -0.23
UBXN1-216ENST00000533908 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.59□□□□□ -0.23
UBXN1-216ENST00000533908 A0A0B4J203 849 aa13.59□□□□□ -0.23
UBXN1-216ENST00000533908 MFNGO00587 321 aa13.59□□□□□ -0.23
UBXN1-216ENST00000533908 AIREO43918 545 aa13.59□□□□□ -0.23
UBXN1-216ENST00000533908 HLA-AP01891 365 aaKnown RBP13.59□□□□□ -0.23
UBXN1-216ENST00000533908 RRASP10301 218 aa13.59□□□□□ -0.23
UBXN1-216ENST00000533908 C19orf35Q6ZS72 473 aa13.59□□□□□ -0.23
UBXN1-216ENST00000533908 H1FOOQ8IZA3 346 aaPredicted RBP13.59□□□□□ -0.23
UBXN1-216ENST00000533908 OR10R2Q8NGX6 335 aa13.59□□□□□ -0.23
UBXN1-216ENST00000533908 ACOT12Q8WYK0 555 aa13.59□□□□□ -0.23
UBXN1-216ENST00000533908 ELF5Q9UKW6 265 aaPredicted RBP13.59□□□□□ -0.23
UBXN1-216ENST00000533908 A0A075B6Q4 140 aa13.58□□□□□ -0.24
UBXN1-216ENST00000533908 FAM223BA6NKX1 122 aa13.58□□□□□ -0.24
UBXN1-216ENST00000533908 PPP5D1E7EU14 171 aa13.58□□□□□ -0.24
UBXN1-216ENST00000533908 J3QRK9 145 aa13.58□□□□□ -0.24
UBXN1-216ENST00000533908 TPPPO94811 219 aa13.58□□□□□ -0.24
UBXN1-216ENST00000533908 DIRAS3O95661 229 aa13.58□□□□□ -0.24
UBXN1-216ENST00000533908 SAA1P0DJI8 122 aaPredicted RBP13.58□□□□□ -0.24
UBXN1-216ENST00000533908 KIR2DS2P43631 304 aa13.58□□□□□ -0.24
UBXN1-216ENST00000533908 OR10A3P58181 314 aa13.58□□□□□ -0.24
UBXN1-216ENST00000533908 CBX3Q13185 183 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms