RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 DTYMKP23919 212 aa8.09□□□□□ -1.11
CAPN1-225ENST00000533704 RUNX1Q01196 453 aa8.09□□□□□ -1.11
CAPN1-225ENST00000533704 AKIRIN2Q53H80 203 aa8.09□□□□□ -1.11
CAPN1-225ENST00000533704 OR2B11Q5JQS5 317 aa8.09□□□□□ -1.11
CAPN1-225ENST00000533704 HACD4Q5VWC8 232 aa8.09□□□□□ -1.11
CAPN1-225ENST00000533704 PYHIN1Q6K0P9 492 aa8.09□□□□□ -1.11
CAPN1-225ENST00000533704 C11orf87Q6NUJ2 197 aa8.09□□□□□ -1.11
CAPN1-225ENST00000533704 OR5H6Q8NGV6 325 aa8.09□□□□□ -1.11
CAPN1-225ENST00000533704 PHB2Q99623 299 aa8.09□□□□□ -1.11
CAPN1-225ENST00000533704 DCUN1D5Q9BTE7 237 aa8.09□□□□□ -1.11
CAPN1-225ENST00000533704 TRAV18A0A075B6X5 111 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 IGHV4OR15-8A0A075B7B6 117 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 A0A087WW49 117 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 A6NHS1 94 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 SAP30O75446 220 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 TUSC2O75896 110 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 SCGNO76038 276 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 IGLV2-23P01705 113 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 FCER2P06734 321 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 RRASP10301 218 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 DUTP33316 252 aaKnown RBP8.08□□□□□ -1.12
CAPN1-225ENST00000533704 LGALS7P47929 136 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 PITPNAQ00169 270 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 DCTN2Q13561 401 aaKnown RBP8.08□□□□□ -1.12
CAPN1-225ENST00000533704 SRSF7Q16629 238 aaKnown RBP eCLIP8.08□□□□□ -1.12
CAPN1-225ENST00000533704 VMA21Q3ZAQ7 101 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 TMEM177Q53S58 311 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 IDO2Q6ZQW0 420 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 Q6ZS49 121 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 ADTRPQ96IZ2 230 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 CENPOQ9BU64 300 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.08□□□□□ -1.12
CAPN1-225ENST00000533704 SCOCQ9UIL1 159 aa8.08□□□□□ -1.12
CAPN1-225ENST00000533704 C13orf42A0A1B0GVH6 325 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 SRRM4A7MD48 611 aaKnown RBP8.07□□□□□ -1.12
CAPN1-225ENST00000533704 LINC00473A8K010 186 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 MPPED1O15442 326 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 SSX5O60225 188 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 FCGR3BO75015 233 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 HSPB1P04792 205 aaKnown RBP8.07□□□□□ -1.12
CAPN1-225ENST00000533704 CRYGBP07316 175 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 CTXN2P0C2S0 81 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 ARPC4P59998 168 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 DEFA5Q01523 94 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 TAGLNQ01995 201 aaKnown RBP8.07□□□□□ -1.12
CAPN1-225ENST00000533704 TNXAQ16473 311 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 KCTD21Q4G0X4 260 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 CNIH2Q6PI25 160 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 KCTD9Q7L273 389 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 ZNF645Q8N7E2 425 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 POC5Q8NA72 575 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 ACOT12Q8WYK0 555 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 DLX4Q92988 240 aaPredicted RBP8.07□□□□□ -1.12
CAPN1-225ENST00000533704 B9D2Q9BPU9 175 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 DCSTAMPQ9H295 470 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 SLA2Q9H6Q3 261 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 COA4Q9NYJ1 87 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 OR2W1Q9Y3N9 320 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 ETV7Q9Y603 341 aa8.07□□□□□ -1.12
CAPN1-225ENST00000533704 IGKV1D-13A0A0B4J2D9 117 aa8.06□□□□□ -1.12
CAPN1-225ENST00000533704 ANKRD34BA5PLL1 514 aa8.06□□□□□ -1.12
CAPN1-225ENST00000533704 IGKV1-13P0DP09 117 aa8.06□□□□□ -1.12
CAPN1-225ENST00000533704 PTHLHP12272 177 aa8.06□□□□□ -1.12
CAPN1-225ENST00000533704 TGFBR1P36897 503 aa8.06□□□□□ -1.12
CAPN1-225ENST00000533704 LSM3P62310 102 aaKnown RBP8.06□□□□□ -1.12
CAPN1-225ENST00000533704 SSBP2P81877 361 aaPredicted RBP8.06□□□□□ -1.12
CAPN1-225ENST00000533704 VAX1Q5SQQ9 334 aa8.06□□□□□ -1.12
CAPN1-225ENST00000533704 TCTEX1D2Q8WW35 142 aa8.06□□□□□ -1.12
CAPN1-225ENST00000533704 DDB2Q92466 427 aa8.06□□□□□ -1.12
CAPN1-225ENST00000533704 SLC25A38Q96DW6 304 aa8.06□□□□□ -1.12
CAPN1-225ENST00000533704 RHOVQ96L33 236 aa8.06□□□□□ -1.12
CAPN1-225ENST00000533704 VCX3AQ9NNX9 186 aa8.06□□□□□ -1.12
CAPN1-225ENST00000533704 ANXA10Q9UJ72 324 aa8.06□□□□□ -1.12
CAPN1-225ENST00000533704 ZNF256Q9Y2P7 627 aaPredicted RBP8.06□□□□□ -1.12
CAPN1-225ENST00000533704 COL7A1Q02388 2944 aa8.06□□□□□ -1.12
CAPN1-225ENST00000533704 MSGN1A6NI15 193 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 ACTL6BO94805 426 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 HLA-DQB1P01920 261 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 INSL3P51460 131 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 UBE2KP61086 200 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 RPL30P62888 115 aaKnown RBP8.05□□□□□ -1.12
CAPN1-225ENST00000533704 PRSS8Q16651 343 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 HAPLN4Q86UW8 402 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 ZNF429Q86V71 674 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 GVQW1Q8N7I0 195 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 TEX45Q8NA69 505 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 BEST4Q8NFU0 473 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 OSR1Q8TAX0 266 aaPredicted RBP8.05□□□□□ -1.12
CAPN1-225ENST00000533704 SECTM1Q8WVN6 248 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 OR4C12Q96R67 309 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 GPHA2Q96T91 129 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 ASCL2Q99929 193 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 RSRP1Q9BUV0 290 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 DIABLOQ9NR28 239 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 TAS2R8Q9NYW2 309 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 SPATA2Q9UM82 520 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 MRPS7Q9Y2R9 242 aaKnown RBP8.05□□□□□ -1.12
CAPN1-225ENST00000533704 RBMX2Q9Y388 322 aaKnown RBP8.05□□□□□ -1.12
CAPN1-225ENST00000533704 PRELID3BQ9Y3B1 194 aa8.05□□□□□ -1.12
CAPN1-225ENST00000533704 A0A0G2JLM5 398 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms