RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 CA5BP1Q8WTZ4 195 aa12.71□□□□□ -0.38
CACNA1E-208ENST00000533229 EDARADDQ8WWZ3 215 aa12.71□□□□□ -0.38
CACNA1E-208ENST00000533229 LEAP2Q969E1 77 aa12.71□□□□□ -0.38
CACNA1E-208ENST00000533229 PINX1Q96BK5 328 aaKnown RBP12.71□□□□□ -0.38
CACNA1E-208ENST00000533229 TVP23CQ96ET8 276 aa12.71□□□□□ -0.38
CACNA1E-208ENST00000533229 NIPSNAP3BQ9BS92 247 aa12.71□□□□□ -0.38
CACNA1E-208ENST00000533229 JPT1Q9UK76 154 aa12.71□□□□□ -0.38
CACNA1E-208ENST00000533229 MAP1LC3B2A6NCE7 125 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 SLC31A2O15432 143 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 YPEL1O60688 119 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 BMP5P22003 454 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 CEACAM8P31997 349 aaPredicted RBP12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 TFF3Q07654 80 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 OR10P1Q8NGE3 313 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 OR10G4Q8NGN3 311 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 YPEL2Q96QA6 119 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 MAP1LC3BQ9GZQ8 125 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 IFI27L2Q9H2X8 130 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 LAMP3Q9UQV4 416 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 RP1L1Q8IWN7 2480 aaPredicted RBP12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 CEBPZOSA8MTT3 80 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 A8MXE2 369 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 F2RL2O00254 374 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 S100A6P06703 90 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 CGB3P0DN86 165 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 CGB7P0DN87 165 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 NUBP1P53384 320 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 HEPN1Q6WQI6 88 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 TMEM147Q9BVK8 224 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 SEBOXQ9HB31 216 aaPredicted RBP12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 TIMM9Q9Y5J7 89 aa12.7□□□□□ -0.38
CACNA1E-208ENST00000533229 DMXL2Q8TDJ6 3036 aa12.69□□□□□ -0.38
CACNA1E-208ENST00000533229 M0R1X1 148 aa12.69□□□□□ -0.38
CACNA1E-208ENST00000533229 DLL1O00548 723 aa12.69□□□□□ -0.38
CACNA1E-208ENST00000533229 SMIM6P0DI80 62 aa12.69□□□□□ -0.38
CACNA1E-208ENST00000533229 C17orf58Q2M2W7 97 aa12.69□□□□□ -0.38
CACNA1E-208ENST00000533229 SLC35E3Q7Z769 313 aa12.69□□□□□ -0.38
CACNA1E-208ENST00000533229 TGIF2LYQ8IUE0 185 aa12.69□□□□□ -0.38
CACNA1E-208ENST00000533229 MALSU1Q96EH3 234 aa12.69□□□□□ -0.38
CACNA1E-208ENST00000533229 SFXN3Q9BWM7 321 aa12.69□□□□□ -0.38
CACNA1E-208ENST00000533229 TMPRSS5Q9H3S3 457 aa12.69□□□□□ -0.38
CACNA1E-208ENST00000533229 GCM1Q9NP62 436 aa12.69□□□□□ -0.38
CACNA1E-208ENST00000533229 CALYQ9NYX4 217 aa12.69□□□□□ -0.38
CACNA1E-208ENST00000533229 A0A087WWC5 75 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 C15orf62A8K5M9 175 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 HPRT1P00492 218 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 IGHV2-5P01817 119 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 DEFA4P12838 97 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 NQO2P16083 231 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 FGF7P21781 194 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 ERVFRD-1P60508 538 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 TLE1Q04724 770 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 ATP6V1FQ16864 119 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 C3orf36Q3SXR2 165 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 PPP1R35Q8TAP8 253 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 LHX4Q969G2 390 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 CIB3Q96Q77 187 aaPredicted RBP12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 SLC39A9Q9NUM3 307 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 URGCP-MRPS24S4R325 110 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 TRAV3A0A0B4J244 114 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 CYB5R3P00387 301 aaPredicted RBP12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 IGHV1-46P01743 117 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 CRYABP02511 175 aaKnown RBP12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 CXCL1P09341 107 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 MDKP21741 143 aaPredicted RBP12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 CCKARP32238 428 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 GATA4P43694 442 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 ELOBQ15370 118 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 VWC2Q2TAL6 325 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 MRGPRGQ86SM5 289 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 FAM57AQ8TBR7 257 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 Q8WTZ3 238 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 NPCDR1Q9BY65 106 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 SLC25A22Q9H936 323 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 GSN-AS1Q9NRJ2 163 aa12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 METTL1Q9UBP6 276 aaKnown RBP12.68□□□□□ -0.38
CACNA1E-208ENST00000533229 FABP1P07148 127 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 GNB2P62879 340 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 AARDQ4LEZ3 155 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 Q8N7P7 452 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 DEFB108BQ8NET1 73 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 FAM222BQ8WU58 562 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 DCAF16Q9NXF7 216 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 OR6C3Q9NZP0 311 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 VAX2Q9UIW0 290 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 MAP1BP46821 2468 aaKnown RBP12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 ANKRD11Q6UB99 2663 aaPredicted RBP12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 CLN5O75503 358 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 IFNA17P01571 189 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 S100A8P05109 93 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 CD40P25942 277 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 CD81P60033 236 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 CT45A1Q5HYN5 189 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 TCF23Q7RTU1 214 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 OR10G9Q8NGN4 311 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 OR10G7Q8NGN6 311 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 CT45A3Q8NHU0 189 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 ZNF251Q9BRH9 671 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 NIT2Q9NQR4 276 aa12.67□□□□□ -0.38
CACNA1E-208ENST00000533229 CEP250Q9BV73 2442 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms