RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 DUTP33316 252 aaKnown RBP18.12■□□□□ 0.49
SMPD1-209ENST00000533196 TPPP2P59282 170 aa18.12■□□□□ 0.49
SMPD1-209ENST00000533196 POC5Q8NA72 575 aa18.12■□□□□ 0.49
SMPD1-209ENST00000533196 GRPEL2Q8TAA5 225 aa18.12■□□□□ 0.49
SMPD1-209ENST00000533196 CASTOR1Q8WTX7 329 aa18.12■□□□□ 0.49
SMPD1-209ENST00000533196 DDB2Q92466 427 aa18.12■□□□□ 0.49
SMPD1-209ENST00000533196 PRR25Q96S07 402 aa18.12■□□□□ 0.49
SMPD1-209ENST00000533196 ALX4Q9H161 411 aaPredicted RBP18.12■□□□□ 0.49
SMPD1-209ENST00000533196 ELF5Q9UKW6 265 aaPredicted RBP18.12■□□□□ 0.49
SMPD1-209ENST00000533196 COL7A1Q02388 2944 aa18.11■□□□□ 0.49
SMPD1-209ENST00000533196 IGHV4OR15-8A0A075B7B6 117 aa18.11■□□□□ 0.49
SMPD1-209ENST00000533196 A0A087WW49 117 aa18.11■□□□□ 0.49
SMPD1-209ENST00000533196 TRGV3P03979 118 aa18.11■□□□□ 0.49
SMPD1-209ENST00000533196 NHLRC4P0CG21 123 aaPredicted RBP18.11■□□□□ 0.49
SMPD1-209ENST00000533196 VMA21Q3ZAQ7 101 aa18.11■□□□□ 0.49
SMPD1-209ENST00000533196 TEX45Q8NA69 505 aa18.11■□□□□ 0.49
SMPD1-209ENST00000533196 OSR1Q8TAX0 266 aaPredicted RBP18.11■□□□□ 0.49
SMPD1-209ENST00000533196 DLX4Q92988 240 aaPredicted RBP18.11■□□□□ 0.49
SMPD1-209ENST00000533196 MS4A10Q96PG2 267 aa18.11■□□□□ 0.49
SMPD1-209ENST00000533196 ST6GALNAC5Q9BVH7 336 aa18.11■□□□□ 0.49
SMPD1-209ENST00000533196 OR51E2Q9H255 320 aa18.11■□□□□ 0.49
SMPD1-209ENST00000533196 A0A0G2JLM5 398 aa18.1■□□□□ 0.49
SMPD1-209ENST00000533196 TMEM127O75204 238 aa18.1■□□□□ 0.49
SMPD1-209ENST00000533196 SDC2P34741 201 aa18.1■□□□□ 0.49
SMPD1-209ENST00000533196 GNG2P59768 71 aa18.1■□□□□ 0.49
SMPD1-209ENST00000533196 UBE2KP61086 200 aa18.1■□□□□ 0.49
SMPD1-209ENST00000533196 SSBP2P81877 361 aaPredicted RBP18.1■□□□□ 0.49
SMPD1-209ENST00000533196 CNIH2Q6PI25 160 aa18.1■□□□□ 0.49
SMPD1-209ENST00000533196 ZNF645Q8N7E2 425 aa18.1■□□□□ 0.49
SMPD1-209ENST00000533196 LGALS14Q8TCE9 139 aa18.1■□□□□ 0.49
SMPD1-209ENST00000533196 RHBDL2Q9NX52 303 aa18.1■□□□□ 0.49
SMPD1-209ENST00000533196 OR2W1Q9Y3N9 320 aa18.1■□□□□ 0.49
SMPD1-209ENST00000533196 ETV7Q9Y603 341 aa18.1■□□□□ 0.49
SMPD1-209ENST00000533196 IGHV3-11P01762 117 aa18.09■□□□□ 0.49
SMPD1-209ENST00000533196 HLA-DQB1P01920 261 aa18.09■□□□□ 0.49
SMPD1-209ENST00000533196 SNRPBP14678 240 aaKnown RBP18.09■□□□□ 0.49
SMPD1-209ENST00000533196 SLURP1P55000 103 aa18.09■□□□□ 0.49
SMPD1-209ENST00000533196 KCTD21Q4G0X4 260 aa18.09■□□□□ 0.49
SMPD1-209ENST00000533196 C11orf87Q6NUJ2 197 aa18.09■□□□□ 0.49
SMPD1-209ENST00000533196 ZNF355PQ9NSJ1 428 aa18.09■□□□□ 0.49
SMPD1-209ENST00000533196 TMEM235A6NFC5 223 aa18.08■□□□□ 0.48
SMPD1-209ENST00000533196 SRRM4A7MD48 611 aaKnown RBP18.08■□□□□ 0.48
SMPD1-209ENST00000533196 SAP30O75446 220 aa18.08■□□□□ 0.48
SMPD1-209ENST00000533196 CD36P16671 472 aa18.08■□□□□ 0.48
SMPD1-209ENST00000533196 PJVKQ0ZLH3 352 aa18.08■□□□□ 0.48
SMPD1-209ENST00000533196 ACSM6Q6P461 480 aa18.08■□□□□ 0.48
SMPD1-209ENST00000533196 NUDCD2Q8WVJ2 157 aa18.08■□□□□ 0.48
SMPD1-209ENST00000533196 RANGRFQ9HD47 186 aaPredicted RBP18.08■□□□□ 0.48
SMPD1-209ENST00000533196 A0A0A6YYH2 397 aa18.07■□□□□ 0.48
SMPD1-209ENST00000533196 C13orf42A0A1B0GVH6 325 aa18.07■□□□□ 0.48
SMPD1-209ENST00000533196 A6NJ64 397 aa18.07■□□□□ 0.48
SMPD1-209ENST00000533196 LINC00473A8K010 186 aa18.07■□□□□ 0.48
SMPD1-209ENST00000533196 CREBL2O60519 120 aaPredicted RBP18.07■□□□□ 0.48
SMPD1-209ENST00000533196 CRYZL1O95825 349 aa18.07■□□□□ 0.48
SMPD1-209ENST00000533196 OR5T1Q8NG75 326 aa18.07■□□□□ 0.48
SMPD1-209ENST00000533196 OR6Q1Q8NGQ2 317 aa18.07■□□□□ 0.48
SMPD1-209ENST00000533196 ANXA10Q9UJ72 324 aa18.07■□□□□ 0.48
SMPD1-209ENST00000533196 ZP3P21754 424 aa18.06■□□□□ 0.48
SMPD1-209ENST00000533196 AADACP22760 399 aa18.06■□□□□ 0.48
SMPD1-209ENST00000533196 MXD1Q05195 221 aa18.06■□□□□ 0.48
SMPD1-209ENST00000533196 TINAGL1Q9GZM7 467 aaPredicted RBP18.06■□□□□ 0.48
SMPD1-209ENST00000533196 RBMX2Q9Y388 322 aaKnown RBP18.06■□□□□ 0.48
SMPD1-209ENST00000533196 PRELID3BQ9Y3B1 194 aa18.06■□□□□ 0.48
SMPD1-209ENST00000533196 LOC100506127A0A0U1RQW1 187 aa18.05■□□□□ 0.48
SMPD1-209ENST00000533196 LY86O95711 162 aa18.05■□□□□ 0.48
SMPD1-209ENST00000533196 NFYAP23511 347 aaPredicted RBP18.05■□□□□ 0.48
SMPD1-209ENST00000533196 PRSS8Q16651 343 aa18.05■□□□□ 0.48
SMPD1-209ENST00000533196 MRGPRG-AS1Q2M3A8 158 aa18.05■□□□□ 0.48
SMPD1-209ENST00000533196 OVCH2Q7RTZ1 564 aa18.05■□□□□ 0.48
SMPD1-209ENST00000533196 OR4C12Q96R67 309 aa18.05■□□□□ 0.48
SMPD1-209ENST00000533196 MRPS7Q9Y2R9 242 aaKnown RBP18.05■□□□□ 0.48
SMPD1-209ENST00000533196 SSX5O60225 188 aa18.04■□□□□ 0.48
SMPD1-209ENST00000533196 NEDD8Q15843 81 aa18.04■□□□□ 0.48
SMPD1-209ENST00000533196 TIMM50Q3ZCQ8 353 aa18.04■□□□□ 0.48
SMPD1-209ENST00000533196 KCTD9Q7L273 389 aa18.04■□□□□ 0.48
SMPD1-209ENST00000533196 USMG5Q96IX5 58 aa18.04■□□□□ 0.48
SMPD1-209ENST00000533196 WWC2-AS2Q96NR7 200 aa18.04■□□□□ 0.48
SMPD1-209ENST00000533196 PHB2Q99623 299 aa18.04■□□□□ 0.48
SMPD1-209ENST00000533196 HSD17B10Q99714 261 aaKnown RBP18.04■□□□□ 0.48
SMPD1-209ENST00000533196 ELOVL1Q9BW60 279 aa18.04■□□□□ 0.48
SMPD1-209ENST00000533196 SMAD5-AS1Q9Y6J3 95 aa18.04■□□□□ 0.48
SMPD1-209ENST00000533196 FCGR3BO75015 233 aa18.03■□□□□ 0.48
SMPD1-209ENST00000533196 TUSC2O75896 110 aa18.03■□□□□ 0.48
SMPD1-209ENST00000533196 CLEC2LP0C7M8 214 aa18.03■□□□□ 0.48
SMPD1-209ENST00000533196 CDK10Q15131 360 aa18.03■□□□□ 0.48
SMPD1-209ENST00000533196 IDNKQ5T6J7 187 aa18.03■□□□□ 0.48
SMPD1-209ENST00000533196 CROCCP3Q8IVE0 287 aa18.03■□□□□ 0.48
SMPD1-209ENST00000533196 MMD2Q8IY49 270 aa18.03■□□□□ 0.48
SMPD1-209ENST00000533196 OR5H6Q8NGV6 325 aa18.03■□□□□ 0.48
SMPD1-209ENST00000533196 SLC25A38Q96DW6 304 aa18.03■□□□□ 0.48
SMPD1-209ENST00000533196 MSGN1A6NI15 193 aa18.02■□□□□ 0.48
SMPD1-209ENST00000533196 IGLV2-14P01704 120 aa18.02■□□□□ 0.48
SMPD1-209ENST00000533196 MSMO1Q15800 293 aa18.02■□□□□ 0.48
SMPD1-209ENST00000533196 TNXAQ16473 311 aa18.02■□□□□ 0.48
SMPD1-209ENST00000533196 SRSF12Q8WXF0 261 aaKnown RBP18.02■□□□□ 0.48
SMPD1-209ENST00000533196 RNF167Q9H6Y7 350 aa18.02■□□□□ 0.48
SMPD1-209ENST00000533196 DIABLOQ9NR28 239 aa18.02■□□□□ 0.48
SMPD1-209ENST00000533196 COA4Q9NYJ1 87 aa18.02■□□□□ 0.48
SMPD1-209ENST00000533196 TRAV18A0A075B6X5 111 aa18.01■□□□□ 0.47
SMPD1-209ENST00000533196 IGKV1D-13A0A0B4J2D9 117 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms