RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 CRYGBP07316 175 aa23.54■■□□□ 1.36
SSSCA1-207ENST00000533115 RPS19P39019 145 aaKnown RBP23.54■■□□□ 1.36
SSSCA1-207ENST00000533115 LSM3P62310 102 aaKnown RBP23.54■■□□□ 1.36
SSSCA1-207ENST00000533115 FXYD3Q14802 87 aa23.54■■□□□ 1.36
SSSCA1-207ENST00000533115 ACTBL2Q562R1 376 aa23.54■■□□□ 1.36
SSSCA1-207ENST00000533115 LFNGQ8NES3 379 aa23.54■■□□□ 1.36
SSSCA1-207ENST00000533115 OR5B12Q96R08 314 aa23.54■■□□□ 1.36
SSSCA1-207ENST00000533115 LINC00473A8K010 186 aa23.53■■□□□ 1.36
SSSCA1-207ENST00000533115 ARPC1BO15143 372 aaKnown RBP23.53■■□□□ 1.36
SSSCA1-207ENST00000533115 PYHIN1Q6K0P9 492 aa23.53■■□□□ 1.36
SSSCA1-207ENST00000533115 OR1N2Q8NGR9 330 aa23.53■■□□□ 1.36
SSSCA1-207ENST00000533115 CASTOR1Q8WTX7 329 aa23.53■■□□□ 1.36
SSSCA1-207ENST00000533115 AUNIPQ9H7T9 357 aa23.53■■□□□ 1.36
SSSCA1-207ENST00000533115 TRIM64CA6NLI5 447 aa23.52■■□□□ 1.36
SSSCA1-207ENST00000533115 SRRM4A7MD48 611 aaKnown RBP23.52■■□□□ 1.36
SSSCA1-207ENST00000533115 SLC22A5O76082 557 aa23.52■■□□□ 1.36
SSSCA1-207ENST00000533115 GNB1P62873 340 aa23.52■■□□□ 1.36
SSSCA1-207ENST00000533115 BEST4Q8NFU0 473 aa23.52■■□□□ 1.36
SSSCA1-207ENST00000533115 GRPEL2Q8TAA5 225 aa23.52■■□□□ 1.36
SSSCA1-207ENST00000533115 K7EIL1 84 aa23.51■■□□□ 1.35
SSSCA1-207ENST00000533115 CNIH1O95406 144 aa23.51■■□□□ 1.35
SSSCA1-207ENST00000533115 SSBP2P81877 361 aaPredicted RBP23.51■■□□□ 1.35
SSSCA1-207ENST00000533115 PJVKQ0ZLH3 352 aa23.51■■□□□ 1.35
SSSCA1-207ENST00000533115 HOGA1Q86XE5 327 aa23.51■■□□□ 1.35
SSSCA1-207ENST00000533115 GVQW1Q8N7I0 195 aa23.51■■□□□ 1.35
SSSCA1-207ENST00000533115 IGKV1D-13A0A0B4J2D9 117 aa23.5■■□□□ 1.35
SSSCA1-207ENST00000533115 OR8U8P0C7N1 319 aa23.5■■□□□ 1.35
SSSCA1-207ENST00000533115 IGKV1-13P0DP09 117 aa23.5■■□□□ 1.35
SSSCA1-207ENST00000533115 ARPC4P59998 168 aa23.5■■□□□ 1.35
SSSCA1-207ENST00000533115 ZNF616Q08AN1 781 aa23.5■■□□□ 1.35
SSSCA1-207ENST00000533115 RBMX2Q9Y388 322 aaKnown RBP23.5■■□□□ 1.35
SSSCA1-207ENST00000533115 WI2-2373I1.2A0A1W2PRP0 233 aa23.49■■□□□ 1.35
SSSCA1-207ENST00000533115 TUSC2O75896 110 aa23.49■■□□□ 1.35
SSSCA1-207ENST00000533115 CRYZL1O95825 349 aa23.49■■□□□ 1.35
SSSCA1-207ENST00000533115 IGLV2-14P01704 120 aa23.49■■□□□ 1.35
SSSCA1-207ENST00000533115 CD40LGP29965 261 aa23.49■■□□□ 1.35
SSSCA1-207ENST00000533115 ASPHD1Q5U4P2 390 aa23.49■■□□□ 1.35
SSSCA1-207ENST00000533115 S100A16Q96FQ6 103 aaKnown RBP23.49■■□□□ 1.35
SSSCA1-207ENST00000533115 XRCC3O43542 346 aa23.48■■□□□ 1.35
SSSCA1-207ENST00000533115 VMA21Q3ZAQ7 101 aa23.48■■□□□ 1.35
SSSCA1-207ENST00000533115 UBE2NLQ5JXB2 153 aa23.48■■□□□ 1.35
SSSCA1-207ENST00000533115 C9orf66Q5T8R8 295 aa23.48■■□□□ 1.35
SSSCA1-207ENST00000533115 TEX45Q8NA69 505 aa23.48■■□□□ 1.35
SSSCA1-207ENST00000533115 OSR1Q8TAX0 266 aaPredicted RBP23.48■■□□□ 1.35
SSSCA1-207ENST00000533115 MS4A10Q96PG2 267 aa23.48■■□□□ 1.35
SSSCA1-207ENST00000533115 ALX4Q9H161 411 aaPredicted RBP23.48■■□□□ 1.35
SSSCA1-207ENST00000533115 ZMAT5Q9UDW3 170 aaKnown RBP23.48■■□□□ 1.35
SSSCA1-207ENST00000533115 PTHLHP12272 177 aa23.47■■□□□ 1.35
SSSCA1-207ENST00000533115 UBE2KP61086 200 aa23.47■■□□□ 1.35
SSSCA1-207ENST00000533115 KCTD9Q7L273 389 aa23.47■■□□□ 1.35
SSSCA1-207ENST00000533115 FUNDC2Q9BWH2 189 aa23.47■■□□□ 1.35
SSSCA1-207ENST00000533115 SLA2Q9H6Q3 261 aa23.47■■□□□ 1.35
SSSCA1-207ENST00000533115 PRELID3BQ9Y3B1 194 aa23.47■■□□□ 1.35
SSSCA1-207ENST00000533115 SEC14L6B5MCN3 397 aa23.46■■□□□ 1.35
SSSCA1-207ENST00000533115 FCGR3BO75015 233 aa23.46■■□□□ 1.35
SSSCA1-207ENST00000533115 LGALS1P09382 135 aaKnown RBP23.46■■□□□ 1.35
SSSCA1-207ENST00000533115 CBX5P45973 191 aa23.46■■□□□ 1.35
SSSCA1-207ENST00000533115 TPPP2P59282 170 aa23.46■■□□□ 1.35
SSSCA1-207ENST00000533115 MRGPRG-AS1Q2M3A8 158 aa23.46■■□□□ 1.35
SSSCA1-207ENST00000533115 SAMD12Q8N8I0 201 aa23.46■■□□□ 1.35
SSSCA1-207ENST00000533115 SLC25A46Q96AG3 418 aa23.46■■□□□ 1.35
SSSCA1-207ENST00000533115 RPL30P62888 115 aaKnown RBP23.45■■□□□ 1.34
SSSCA1-207ENST00000533115 OVCH2Q7RTZ1 564 aa23.45■■□□□ 1.34
SSSCA1-207ENST00000533115 TMEM68Q96MH6 324 aa23.45■■□□□ 1.34
SSSCA1-207ENST00000533115 FCGR2CP31995 323 aa23.44■■□□□ 1.34
SSSCA1-207ENST00000533115 DGCR2P98153 550 aa23.44■■□□□ 1.34
SSSCA1-207ENST00000533115 POC5Q8NA72 575 aa23.44■■□□□ 1.34
SSSCA1-207ENST00000533115 OR5T1Q8NG75 326 aa23.44■■□□□ 1.34
SSSCA1-207ENST00000533115 OR13F1Q8NGS4 319 aa23.44■■□□□ 1.34
SSSCA1-207ENST00000533115 HSD17B10Q99714 261 aaKnown RBP23.44■■□□□ 1.34
SSSCA1-207ENST00000533115 DCUN1D5Q9BTE7 237 aa23.44■■□□□ 1.34
SSSCA1-207ENST00000533115 ZNF355PQ9NSJ1 428 aa23.44■■□□□ 1.34
SSSCA1-207ENST00000533115 MRPS7Q9Y2R9 242 aaKnown RBP23.44■■□□□ 1.34
SSSCA1-207ENST00000533115 LINC01619G3V211 115 aa23.43■■□□□ 1.34
SSSCA1-207ENST00000533115 H3BUA1 57 aa23.43■■□□□ 1.34
SSSCA1-207ENST00000533115 IGHV3-11P01762 117 aa23.43■■□□□ 1.34
SSSCA1-207ENST00000533115 TRGV3P03979 118 aa23.43■■□□□ 1.34
SSSCA1-207ENST00000533115 FCER2P06734 321 aa23.43■■□□□ 1.34
SSSCA1-207ENST00000533115 AADACP22760 399 aa23.43■■□□□ 1.34
SSSCA1-207ENST00000533115 NCS1P62166 190 aa23.43■■□□□ 1.34
SSSCA1-207ENST00000533115 EIF4EBP1Q13541 118 aaPredicted RBP23.43■■□□□ 1.34
SSSCA1-207ENST00000533115 PRSS8Q16651 343 aa23.43■■□□□ 1.34
SSSCA1-207ENST00000533115 OR2B11Q5JQS5 317 aa23.43■■□□□ 1.34
SSSCA1-207ENST00000533115 IDO2Q6ZQW0 420 aa23.43■■□□□ 1.34
SSSCA1-207ENST00000533115 SNAPC3Q92966 411 aa23.43■■□□□ 1.34
SSSCA1-207ENST00000533115 KCTD12Q96CX2 325 aaKnown RBP23.43■■□□□ 1.34
SSSCA1-207ENST00000533115 RHOVQ96L33 236 aa23.43■■□□□ 1.34
SSSCA1-207ENST00000533115 MEIS3P1A6NDR6 274 aa23.42■■□□□ 1.34
SSSCA1-207ENST00000533115 VBP1P61758 197 aa23.42■■□□□ 1.34
SSSCA1-207ENST00000533115 DEFB121Q5J5C9 76 aa23.42■■□□□ 1.34
SSSCA1-207ENST00000533115 TMEM69Q5SWH9 247 aa23.42■■□□□ 1.34
SSSCA1-207ENST00000533115 TCTEX1D2Q8WW35 142 aa23.42■■□□□ 1.34
SSSCA1-207ENST00000533115 SCOCQ9UIL1 159 aa23.42■■□□□ 1.34
SSSCA1-207ENST00000533115 RAMP3O60896 148 aa23.41■■□□□ 1.34
SSSCA1-207ENST00000533115 SAA1P0DJI8 122 aaPredicted RBP23.41■■□□□ 1.34
SSSCA1-207ENST00000533115 TAS2R20P59543 309 aa23.41■■□□□ 1.34
SSSCA1-207ENST00000533115 TNXAQ16473 311 aa23.41■■□□□ 1.34
SSSCA1-207ENST00000533115 ZNF66Q6ZN08 573 aa23.41■■□□□ 1.34
SSSCA1-207ENST00000533115 MFSD4AQ8N468 514 aa23.41■■□□□ 1.34
SSSCA1-207ENST00000533115 OR5AP2Q8NGF4 316 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms