RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 VSIG10L2P0DP72 767 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 CD300CQ08708 224 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 FOXF2Q12947 444 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 EIF4E3Q8N5X7 224 aaKnown RBP9.61□□□□□ -0.87
PTPRK-221ENST00000532331 RHOVQ96L33 236 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 MFSD2BA6NFX1 497 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 CSN3P07498 182 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 MRPL30Q8TCC3 161 aaKnown RBP9.61□□□□□ -0.87
PTPRK-221ENST00000532331 DPM3Q9P2X0 92 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 MPDU1O75352 247 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 LEAP2Q969E1 77 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 WFIKKN1Q96NZ8 548 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 ELOVL1Q9BW60 279 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 SEMA5BQ9P283 1151 aa9.61□□□□□ -0.87
PTPRK-221ENST00000532331 PGLYRP1O75594 196 aaPredicted RBP9.6□□□□□ -0.87
PTPRK-221ENST00000532331 PRSS1P07477 247 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 SCGB1C2P0DMR2 95 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 SNRPEP62304 92 aaKnown RBP9.6□□□□□ -0.87
PTPRK-221ENST00000532331 LINC01590Q5TEZ4 76 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 MDS2Q8NDY4 140 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 FAM186AA6NE01 2351 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 CACNA1IQ9P0X4 2223 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 SELENOTP62341 195 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 PSG7Q13046 419 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 C1QTNF12Q5T7M4 302 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 ACACAQ13085 2346 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 ZNF253O75346 499 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 OR10J1P30954 320 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 LRRC75BQ2VPJ9 315 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 ACP7Q6ZNF0 438 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 RTN4RL2Q86UN3 420 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 MRPL37Q9BZE1 423 aaKnown RBP9.6□□□□□ -0.87
PTPRK-221ENST00000532331 PXMP4Q9Y6I8 212 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 ARID1AO14497 2285 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 M0R2Z0 102 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 WNT9BO14905 357 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 DEDDO75618 318 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 TMEM183BQ1AE95 376 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 HLA-DRB5Q30154 266 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 FAM201AQ5SY85 155 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 LDLRAD3Q86YD5 345 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 H1FOOQ8IZA3 346 aaPredicted RBP9.6□□□□□ -0.87
PTPRK-221ENST00000532331 TMEM204Q9BSN7 226 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 TUBA4BQ9H853 241 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 GREB1Q4ZG55 1949 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 A0A0G2JNJ9 132 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 EFNA4P52798 201 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 TUSC1Q2TAM9 212 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 PEAR1Q5VY43 1037 aaPredicted RBP9.6□□□□□ -0.87
PTPRK-221ENST00000532331 Q96M66 194 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 NRIP2Q9BQI9 281 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 NPFFR1Q9GZQ6 430 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 LYRM2Q9NU23 88 aaPredicted RBP9.6□□□□□ -0.87
PTPRK-221ENST00000532331 Q9UFV3 132 aa9.6□□□□□ -0.87
PTPRK-221ENST00000532331 FAM74A7A6NL05 159 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 IZUMO4Q1ZYL8 232 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 HCP5Q6MZN7 132 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 GBGT1Q8N5D6 347 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 TMEM252Q8N6L7 170 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 SLC25A38Q96DW6 304 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 PLSCR4Q9NRQ2 329 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 PROB1E7EW31 1015 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 MGPP08493 103 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 ZNF735P0CB33 412 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 UBE2V2Q15819 145 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 FAM216BQ8N7L0 139 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 PIN1P1O15428 100 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 KCNAB3O43448 404 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 MRPL54Q6P161 138 aaKnown RBP9.59□□□□□ -0.87
PTPRK-221ENST00000532331 RBKSQ9H477 322 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 IQCF6A8MYZ5 107 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 H3BQ15 152 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 COMPP49747 757 aaPredicted RBP9.59□□□□□ -0.87
PTPRK-221ENST00000532331 FGFRL1Q8N441 504 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 RBM14Q96PK6 669 aaKnown RBP9.59□□□□□ -0.87
PTPRK-221ENST00000532331 CKAP5Q14008 2032 aa9.59□□□□□ -0.87
PTPRK-221ENST00000532331 IGHV1-18A0A0C4DH31 117 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 ISLRO14498 428 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 TM4SF5O14894 197 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 ADAM11O75078 769 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 G0S2P27469 103 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 FXYD3Q14802 87 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 CYB5R2Q6BCY4 276 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 STPG3Q8N7X2 389 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 EAF1Q96JC9 268 aaPredicted RBP9.58□□□□□ -0.88
PTPRK-221ENST00000532331 SOSTQ9BQB4 213 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 RP1P56715 2156 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 C7orf77A4D0Y5 90 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 MFAP4P55083 255 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 PRNTQ86SH4 94 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 PIP4P1Q86T03 277 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 EEF1AKMT3Q96AZ1 226 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 C1QTNF5Q9BXJ0 243 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 GSX1Q9H4S2 264 aaPredicted RBP9.58□□□□□ -0.88
PTPRK-221ENST00000532331 BMPR1BO00238 502 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 TBX6O95947 436 aaPredicted RBP9.58□□□□□ -0.88
PTPRK-221ENST00000532331 RCC1P18754 421 aaPredicted RBP9.58□□□□□ -0.88
PTPRK-221ENST00000532331 HIST3H3Q16695 136 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 RRN3P1Q2M238 152 aa9.58□□□□□ -0.88
PTPRK-221ENST00000532331 SLC35E4Q6ICL7 350 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms